Cololabis saira (Pacific saury): 133441933
Help
Entry
133441933 CDS
T09849
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133441933 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133441933 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133441933 (usp16)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133441933 (usp16)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133441933 (usp16)
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133441933 (usp16)
BRITE hierarchy
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
133441933
NCBI-ProteinID:
XP_061575717
LinkDB
All DBs
Position
4:complement(39171336..39178118)
Genome browser
AA seq
839 aa
AA seq
DB search
MGKKRGKNPRDEDDFDLIVPSCRHIKKGTDQTLIKKLASILDWTSCQDCKPVENKENIST
TPPPDAEEEKETMGLWMCLKCGHRGCGRYSENQHAVKHYETPRSEPHCLVVSLDNWSVWC
YLCDDEVEYSKTGHLAQLVTNIQKQTTTEAINRPQKRVKEEVDELEAEEVAQTVNVEESE
NKENISRNNQKNTKKEKAGKSQSNSTTVGNGSVPVKGLSNLGNTCFFNAVIQNLSQTQLL
RETINKVIEEKTSVDIKPVAAVNLEPLVVQLEQPGSLTLAMCQLLNEIQESQKGVVTPRE
LFTQVCKKAPRFKGFQQQDSQELLRYLLDGMRAEEHKRVSTGIMDVLKQSSKCTDGEELK
KIVKEYEKNGFPKNFVDQVFGGEFTSTIMCQQCKTVSVVMEMFLDLSLPVSDEAYRKKGQ
KKAVQKTSESSQDGRNSPASTSTNDNVPTGTGSKYQQKKAKKQAKKQAKHQRRQQKFDGR
VTLDSLTSNADSENSDVTADVNDSEAANDDAQEETPQGEQNPAASSESEQNQSTELEKEE
GDDSVTDGDSAATSSVSNRFTALSDEQESQDSTLCDEMSNVDLEGEEVTELMDKMEQVNL
EDAFIEDSNAEEQSVESEDEEPEAKEYTVINQDPELAFHTLATRTTPEKQECSVQSCLFQ
FTEVETLTQSNSLLCVTCTKRQKRADKAGESKKNVYTDALNQMLISSPPAVLTLHLKRFQ
QNGYSICKVNRHVQFPMILDIAPYCTTKCKNVSEGDTQILYSLYGMVEHSGTMRSGHYTA
YVKVRPNCPKPSSNGLATEGDAEPPVGSWFHISDTSVHPVSESKVQSCQAYLLFYERII
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaagaggggcaagaaccccagagatgaagatgactttgacctgatagttcca
tcttgcagacatatcaagaagggaacagaccaaactcttataaagaaacttgctagtatt
ttggattggacgagttgtcaagattgtaaacctgtggagaataaagaaaatatcagcaca
actccaccaccggacgctgaagaggaaaaagaaacaatgggactatggatgtgcttgaaa
tgtggccacagaggttgtgggagatattctgaaaaccagcatgccgtcaaacattatgaa
actcctcggtcagagccgcattgcctggtggtcagtttggacaactggagtgtttggtgt
tacttgtgtgatgatgaagttgagtactccaaaacagggcatttggcacagctggtgacc
aacatccagaagcaaactaccacggaagccataaacagaccacagaagagagtgaaagaa
gaagtggatgagttggaagctgaggaggtcgcacagactgtgaatgtagaggaaagtgag
aacaaagaaaacatcagcagaaataatcaaaagaatacgaagaaagagaaagctgggaaa
tcacaaagcaacagcacaactgtggggaatggttctgttcctgtaaaaggactgagcaac
cttggaaacacgtgtttcttcaatgcagtcattcagaatctttcacaaacgcagctgtta
agagagactatcaacaaagtgattgaagagaaaacaagtgttgacattaaacctgttgct
gctgtcaatctggagcctttagttgtgcagttagaacagcccggatccctgactttggcc
atgtgtcagctgctcaacgagatccaggaatcccagaagggtgtggtaacgccacgagag
ttgttcacacaagtttgtaaaaaggctcccaggttcaaaggatttcagcagcaggatagc
caggagctgctgcgctacctgctggatgggatgcgagctgaggagcataaaagagtaagt
acgggcataatggacgttttgaaacaatccagtaaatgcacagatggagaagagctgaaa
aagatcgtcaaagagtatgagaaaaatggctttccaaagaactttgttgaccaagttttt
ggtggagaatttaccagcacaataatgtgtcagcagtgcaaaacggtgtcggtagtgatg
gagatgtttttggatctttcccttcctgtttctgatgaggcatacagaaagaagggccaa
aaaaaagcagttcagaagaccagtgagtcgagccaggatggcagaaacagtcctgcttcg
accagcaccaacgataacgttcccaccgggacaggcagcaagtaccaacagaaaaaggca
aaaaaacaggcaaagaagcaagcaaagcatcaaagaaggcagcagaagtttgatggcaga
gtcactttggacagtctgacgagcaacgcagacagtgaaaactcagacgttactgcagat
gtaaatgacagtgaagcggccaacgacgatgcacaggaggaaaccccacagggtgaacaa
aatcctgcggcgagcagtgagtcggaacagaatcagagcacggagctggaaaaagaagag
ggggacgattcagtgactgacggagactccgcggccacatcatcggtcagcaaccgtttt
acggccttgtcagacgagcaggagtcgcaggacagcaccttatgtgatgaaatgtccaac
gtagatctggaaggagaggaggttacggagctgatggataaaatggagcaagtgaacctg
gaagatgctttcatcgaagactctaatgctgaggaacaaagtgtggagagtgaagatgaa
gagccagaggctaaagaatacacagtaataaaccaagacccggagctggccttccacacg
ctggctaccaggacaaccccggagaaacaggagtgctcggtgcaatcatgtctctttcag
ttcacggaggtagaaaccctcacacagagcaacagcttgctttgtgttacctgcacgaaa
cggcagaagagagcagacaaagctggagaatccaagaagaatgtctacactgatgctttg
aaccaaatgctgatctcctctcccccagctgtcctcaccctgcatttgaaaagatttcaa
caaaatggatacagtatttgtaaagtgaacagacacgtccagtttcccatgattttggat
attgctccttattgtaccactaaatgcaagaatgtatcagagggggatactcagattttg
tacagtttgtacggtatggtagagcacagtggaaccatgaggtcgggtcattacacagcc
tatgtaaaagttcgtcctaattgtcctaaaccttcatccaatggacttgcaacagaaggg
gatgcagagcctcctgtaggatcctggttccatatcagcgatacaagtgttcaccccgtg
agcgagagtaaagtccagagctgccaagcctacctcctcttctatgaaagaatcatctaa
DBGET
integrated database retrieval system
