Cololabis saira (Pacific saury): 133442028
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Entry
133442028 CDS
T09849
Symbol
sb:cb81
Name
(RefSeq) mRNA decay activator protein ZFP36L1-like
KO
K18753
butyrate response factor
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
133442028 (sb:cb81)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133442028 (sb:cb81)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133442028 (sb:cb81)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_9
zf-CCCH_4
Torus
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
133442028
NCBI-ProteinID:
XP_061575891
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Position
4:44483156..44486728
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AA seq
420 aa
AA seq
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MPSDFLTPFLELDEEFCKTFRGLDATDGLSSSLSGSLSGSLSGSLSGGLSCSSQQHRVLG
FQRRHSLCPVTLPNSKFNSGSSELAEPGCWGLQPGPGQRWSRELPLSSLSHIPFRVDRSV
SMIEGGSREEKLSTLPPPPGLCLSSTSVASAAASCPSARAAAVAAAAAPPPHISTRYKTE
LCRTYEESGACKYGAKCQFAHGMDELRGLSRHPKYKTEPCRTFHTIGFCPYGARCHFIHN
ADELQAGPSQRPKPRPPLLRHSLSFAGFPSAASSFRPVEESSPFVFARASSVSPPPSSTG
SPELLSPLFPDPGALKHCPYPFPGDLAVEGGGDSALRFYAVTDSLSPLGFPPSKAPAPPA
YHPPQQLPGGLQRCSSADSLSEEGYTSSCSLSSASSSGSESPSFEGRRLPIFSRLSVSDE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgactttctgacacctttcctggagctggacgaggagttctgcaagactttc
cgcggcctggacgcgacagatggcctgtccagcagcctgtccggcagcttgtccggcagc
ttgtctggcagcctgtccggcggcctgtcctgcagttcgcagcagcaccgggtcctgggt
ttccagcggcgccactctctctgccccgtgacgctccccaactccaagttcaacagcggc
agctcggagctggccgagcccggctgctgggggctccagccgggccccggccagcggtgg
agccgcgagctgccgctctcctcgctgagccacatccccttcagagtcgaccgctcggtc
agcatgatcgagggcggctcccgggaggagaagctgtccaccctgcccccaccgccgggc
ctgtgcctcagcagcacctcggtggcctccgccgccgcctcctgcccctctgccagggcg
gcggccgtggccgcggctgcggcgccgccgcctcacatctccacgcgctacaagacggag
ctgtgccgcacctacgaggagagcggcgcctgcaagtacggcgccaagtgccagttcgcc
cacggcatggacgagctgcgcggcctcagccggcaccccaagtacaagacggagccctgc
cgcaccttccacaccatcggcttctgcccgtacggcgcccgttgccacttcatccacaac
gccgacgagctgcaggccggcccctcccagaggccgaagcccaggccccccctgctgcgg
cacagcctcagcttcgccggcttcccctccgcggccagcagcttccggcccgtggaggag
tcgtcccccttcgtctttgcccgagcgtcctcggtgtcccccccgccgtcctccacgggg
agcccggagctcctgtcccccctcttccccgacccgggggcgctgaagcactgcccctac
ccgttccccggtgacctggccgtcgagggcggcggcgactcggcgctgcgcttctacgcc
gtgaccgactccctaagccccttggggttccccccctccaaggccccggcccccccggcc
taccaccccccccagcagctgccgggaggcctccagcgctgctcctcggcggactcgctc
tcggaggagggctatacctcctcctgctcgctcagctcggcctcatccagcggctcggag
tctcccagcttcgagggccgccgcctgcccatcttcagccgcctctccgtgtcagacgag
tag
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