Cololabis saira (Pacific saury): 133442471
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Entry
133442471 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133442471
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133442471
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
NOD2_WH
LRR_6
PRY
LRR_1
LRR_4
SPRY
PBP1_TM
Sigma70_ner
baeRF_family3
Motif
Other DBs
NCBI-GeneID:
133442471
NCBI-ProteinID:
XP_061576491
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All DBs
Position
1:complement(49618612..49626038)
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AA seq
890 aa
AA seq
DB search
MDLMSISMLVFGDQWTVSLSNMDLMFVSLLVIVNQRTDEDEEQKSIREAFVKITVKFLRR
RKQEKLADLLHSRISSFEDFQVAFIFDGLDECRLPLDFHNPTILSDPRRSTSVDVLLTNL
IRGNLLPSAHLWITTRPAAANQIPPYCVDMVTEVRGFTDPQKEKYFRKRFRNKKQTSRII
SHIKTSRSLHIMCHIPVFCWITATVLENVLETREGGGLPQTLTEMYIHFLVVQAKLKKAK
YDGGAETDPHWSQETRKMIGSLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFT
QIFREESSLYQDQVFCFIHLSVQEFLAALHVHQTFINSGVNLLEDQTTSHTSETREEVQD
DDDDDDDDDDDDDDDDDDDTRLYQRTVDKTLQSPNGHLDLFLRFLLGLSVETNQNLLRGL
MTSNQRSSQNNQKTIKYIKEKISEDLSAERSINLFHCLNELNDRSLVEEVHRSLRSGRLS
TDKLSPAQWSALVFILLSSRDLEVFDLKKFSASEEALRRLLPVVQASKKVLLSGCNLSED
ICPVLSSVLSSQSSSLTELDLSNNGLQDSGLEKLCPGLESPHCKLESLRLSGCNLSEDIC
PVLSSVLSSQSSSLTELDLSNNDLQDSGLEKLCPGLESPHCKLESLRLSGCLISEEGSAS
LVSALTSNPSHLRELDLSYNHPGESAGQLLSAGLEDPRWRLNTLRGVVGYSCQLTIDTNT
VYNKIELSDDNRKMTRVEEDQSYPDHPDRFDVHPQLLCREVLTGRCYWEVQWSRDVSVAV
SYRRISRRGNSDDCRFGRNDHSWSLGCYPGGQYRVRHNNRETSFISSSSSSDSGRVAVYV
DCPAGTLSFYEVVSDRLIHLHTSNTTFTEPLCPGFGFWSWSGSSMSLCPV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatgtccatttccatgctggtctttggagaccagtggactgtcagtctgtcc
aatatggacttgatgtttgtctccttgctggtcattgtaaatcagcggactgatgaagat
gaagagcagaagagcatcagggaggcattcgtgaagatcacagtgaagttcttgaggagg
aggaagcaggagaagctggctgacctcctgcacagcagaatcagcagctttgaagacttc
caggtcgcgttcatatttgacggtctggatgagtgtcgacttcctctggacttccacaac
cctacgatcctcagtgaccccagaaggtccacctcagtggatgtgctgctgacaaacctc
atcagggggaacctgcttccttctgctcatctctggatcaccacaagacccgcagcagca
aatcagatccctccttactgtgttgacatggtgacagaagtcagagggttcactgaccca
cagaaggagaagtacttcaggaagaggttcagaaataagaagcagaccagcaggatcatc
tcccacatcaagacatcacggagcctccacatcatgtgccacatcccagtcttctgctgg
atcactgctacggtcctggagaacgtcctggaaaccagagagggaggggggctgccccag
accctgactgagatgtacatccacttcctggtggtccaggccaaactgaagaaggccaag
tatgatggaggagctgagacagatccacactggagtcaagagaccaggaagatgatcggg
tctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaaccc
gacctgagagagtgtggcatcgatgtcagagaggcttcagtgtactcaggagtgttcacc
cagatctttagagaggagagcagcctgtaccaggaccaggttttctgcttcatccatctg
agtgtccaggagtttctggctgctcttcatgtccatcagaccttcatcaactctggagtc
aacctgttggaagatcagacaacgtctcacacatctgaaacacgagaagaagttcaggat
gatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgacgacgatact
cgcctctatcagagaactgtggacaagaccttacagagtccaaacgggcatctggacttg
ttcctgcgcttcctcttgggtctttcagtggagaccaatcagaacctccttcgaggtctg
atgacatcaaaccaaagaagttcacagaacaatcagaaaacaatcaaatacatcaaggag
aagatcagtgaggacctgtctgcagagagaagcatcaacctgttccactgtctgaatgaa
ctgaacgatcggtctctggtggaggaggtccatcggtccctgaggtctggacgtctctcc
acagataaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcaaga
gatctggaggtgtttgaccttaagaagttctcagcttcagaggaggctctacggaggctg
ctgccggtggtccaagcctccaagaaggttctactgagtggttgtaacctctcagaggac
atctgtccagttctgtcctcagttctcagctctcagtcctccagtctgacagaactggac
ctgagcaacaacggcctgcaggattctggactcgagaagctgtgtcctggactggagagt
ccacactgtaaactggagtctctcagactgagtggctgtaacctctcagaggacatctgt
ccagttctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctgagt
aacaacgacctgcaggattctggactggagaagctgtgtcctggactggagagtccacac
tgtaaactggagtctctcaggctgtcaggctgtctgatctcagaggaaggaagtgcttct
ctggtctcagctctgacctccaatccctcccacttgagagagctggacctgagctacaac
catccaggggagtcagcaggacagcttctgtctgctggactggaggatccccgctggagg
ctgaacactctcaggggtgtggtgggatattcctgtcaactcaccatcgacacaaacaca
gtctacaacaagattgaactgtctgatgacaacaggaagatgacacgtgtggaggaggat
cagtcatatcctgatcatccagacaggtttgatgttcatcctcagctgctgtgtagagag
gttctgacgggtcgctgttactgggaggtccagtggagcagagatgtttctgtagcagtg
agttacagaagaatcagcaggagaggaaactctgatgactgtagatttggaagaaacgat
cattcctggagtctgggttgttatccaggtggtcagtaccgtgtccggcacaataacaga
gaaacatccttcatctcctcatcttcatcttcagactctggcagagtagcagtgtacgtg
gactgtcctgctggaactctgtccttctatgaagtcgtctctgacagactgatccacctc
cacacttccaacacgaccttcactgaacctctctgtcctggatttggattctggtcctgg
tctggttcctcaatgtctctgtgtccagtttag
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