Cololabis saira (Pacific saury): 133442568
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Entry
133442568 CDS
T09849
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03440
Homologous recombination
csai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133442568 (brca2)
03460 Fanconi anemia pathway
133442568 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133442568 (brca2)
03036 Chromosome and associated proteins [BR:
csai03036
]
133442568 (brca2)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133442568 (brca2)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133442568 (brca2)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
133442568 (brca2)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
133442568 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
133442568 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
133442568
NCBI-ProteinID:
XP_061576559
LinkDB
All DBs
Position
4:38190492..38209923
Genome browser
AA seq
3046 aa
AA seq
DB search
MESPPNNMYDAFKDQIWTELGPLDPNWFEILSGQTSVHEVSDQDDLCDNQEANFKTPFEK
ADGSQLFSTPKVFRHSRIVSPEIEDEQSFTAAQEKATLPCTATQSPSLFKLSKERVAGGK
CRDIQTRNEDSFDLLHTPNKSPVSYVKHISESLGAQLNPDVSWTSSLNTPPAVPSTLILS
KTDEEPCPPSATPDRNFVIVRELFPSLSKGSTGDAPENNNVADVSQGAVSTEAHDRSHGT
LNESAWQQKVPDAIEDGEVRSTVAEVINGAENVLSIFFANSSSALRKVKHERLKRKQNIQ
IKETDCSSAVAPSACKAAAAEEEAIDAESDRFPSSPLVKTGHGAISQWSPLSLSEIQSCT
ENSTILKERLQGEANSSPLSWPSGRITDSGFIRKKRLFVDSVRTLKSKEEKDCQFQKMAL
LSGIPESINTSLMPGQEMNGKHLEKLQPEADFCGTGNSELKKGSEEAKVQDLDISQLSRD
FAQDFSQMSDCIQQSKVAEDTFSTSACLSALKQAREKERQATLQHNMDGNNRKHISTFDQ
SYHISEGIINDSGFQSAVTNTTHLTATPLGPCSENTGQSQQSSGFKTDIHTASPFPSTKG
GNGKSHLDAEAGTTLPSVQRNIPHWTLDPRREGKSDANRRSTGQPSGAKRVDNMNCKPLN
GQFHDVLQDKMEVSVPSANASGFKTASNKGIRISTANLERAKHLFEETEGKKTFNNLSTK
CDSATKYKNNISDGSVQSVSSNSNPLPSLCKTFGNFSSQLTASQKADVTELCSLLEEAES
QFDITQSKPPKLQQHCQSNGATPRKAAKELDSDFLAGINFDDSFSSDAEKQEKQSAKPDK
MDSVLDDKANIGTLNTTAQSTDWPLSYAPMKENSSASLCLKSTSEDTRYHSSAKPKNRDS
AEYGEATKVQNTNTFVLGVGFKTAGGNLLNVSKKSLSKARALFADLDKNPPDEESTDKQN
SEIDAKMDQKCNLDRKDIIFTPQENSNGGEGTSKDGNVDTNTCQSGFHMASGKQIPISAN
YMEQADAFFKDRVIMESNDGMSDKNIKHVPDRSENKKNHSEGHVNGCTKFESGNPGLVAR
NTKRPHLDEVGSKVTHALQNAVPFHGKQILPSKPSSSVLRTTSKDIDLSATDEMITGCGF
RTASGKDVSVTADALKRAECLLKEIHTPEAINDQPNQKETSKSGQLNDRVLQPEKSGFQT
ASGKVVGVSLAALKKAETLMKECAGVEGEINPPLLHHKIPVTGSHRGNWGFSAASGKPVA
VSSEALQKAKALFSDIGKTSPAVPDTRTKTKNEDARDNMETVQRGFTTASGAKAHVSRKN
LLKANHRLKEFDDLVLTKAMQEEDAFFREFDMDADDAMLPEDVSSVGGSKKKIPAKLDPD
QREAPTISKEAAGDSVKDVDEQAQQKGDILTPEKSGCQTGSGKAIGYLSPPPTKTSGEAS
NSLLNPCEGVEDKKGATTSRSKLTSLPFNGGGFCAASGKPVAVSSEALQKAKSLFTDLGH
IADLPDISQKRKSDGNQDNGGNTVGMRCGFTTAGGVKVHVSKKSLMKAKHLLKEYEDADD
LKDGTMDSDGNNSGRCKSTENISGRHHVKQSLSKSNQHQREMADFPKEHEHGSTEYSDKP
MKQKEITVPQKGGGFQTASGNVVAISSEALKRAKILLSDCEEASSSHFKLPVTDPVSKSC
GFSAASGKPVVFSSEALQKAKTLFGDISLSKDTAAISDTKKRDEKCEEAEKNRGQIHCGF
STAAGQKVLVSEKSLLKANDLLKESDDGECHYSFSNSTTSQDTHKSDSSKGKYLNRTLNS
TVTPDDGKGNPPERETSLNDEPFSALKQSDHLNKTVVSSSIQGCSFIKEKTRCTSVFKFQ
EDKVVTSGAGSLTDIPEQDVPRVLNCNINQTSRKNPSGVAKADESSVLNLQSLDLSGCTV
TQQKFLAQEALDCTKALLEDEDVAGQSLTLENMPSSGSTEEQRTRKRVMGDPDHIGQPPS
KRRLLEEFDRTINGSRGSVLHPVKSSPIGLMKDRGVFRYGGSLHPNITKPFSERKSNVTT
VFQKTPLAQQSTPGDCRSASSKVPAFVPPFIKSAKMETGKNPAPKENASVSTFVPPFKKQ
KTILQESFSKQQDHQPLTGQPNSNTYVPPTRKIQDTTDVISSVGMANTNTVNNQSVPVTC
GSASSGADVSHVDATSSRNQDVPDDPENIELARDMQDMRIRKKKRQTIRPLPGSLFLTKT
SGVARTPLKVGVNGNPPRRYTPEQLYAYGVHKHATEITSETAESFRFNLLQFIKHEAFLD
GGGVQLADGGWLIPSNDCTAGKEEFYRALCDTPGVDPKLISEAWVYNHYRWIVWKQASME
RSFPETMGSICLTPEQVLLQLKYRYDVEVDHSRRSALKKIMEKDDTAAKSLVLCVCETLS
RGQPQSRQSNNGAKTPQSADSKVENPYAVVGLTDGWYAIKAQLDEPLTAMLEKGLLAVGG
KLIIHGAQLTGSQDACPPLEAPESLMLKICANSSRRVRWDAKLGFHRDPRPFLLPVSSLY
STGGPVGCVDIVIVRSYPIQWMERKPDGGVVFRSVRAEEKEARRYNSIRQKAMEMLFMKI
QVDFEKEEKGRTEPKRRRQTISDQDVARLEDGQDLYEAVGNDPAYLEAHLSEQQLETLRS
YRHSLMEKKQAELQDRYRHALEEENTQMNCPKRDVTPVWRLSIADSMAHPSCVSQLNLWR
PSSDLQALLKEGCRYKVYNLVTSDGKKRSSIETVQLTGTKKTQFQQLQVSQEWLSERFQP
RVSTNFVNLQNPDFQPLCGEVDLTGCVISIIDGQGSSPAFYLADGQLNFVKVRCFSSLSL
VGLEDVLKPRVLLALSNLQLRGQSMYPTPVVYAGDLTVFSTNPKEVHLQESFGHLKSVLQ
CQESFYLNAEEKLSDLVKSEGLSSISSPALKPQTPASATDRGQDSKTSVTFQKPVGNHGS
FTPVNKNTSAVAPSTENDRKIQKRRRALDYLSRVPSPPPLSHLSSVASPCVNKTFNPPRR
SGTPGTLKTAHTPAQKPSEATVEHELVNDEELAMIDTQALLVGDVS
NT seq
9141 nt
NT seq
+upstream
nt +downstream
nt
atggaatcacctcctaacaacatgtatgatgcattcaaagaccagatctggacagagctg
ggaccactggacccgaactggtttgaaatactgagtgggcaaacgtctgttcacgaggtg
tcagatcaagatgacctttgtgataatcaagaggcaaattttaaaacaccttttgaaaaa
gctgatggcagtcagctgttttcaacccctaaagttttcagacacagtcgaattgtgtct
ccagaaattgaagatgagcagtctttcacagctgcacaagaaaaagcaacattgccatgc
acagcaacacaaagtcccagcttgtttaagctgtcaaaggagagggtcgcaggtgggaaa
tgccgagacatccagactcggaatgaggacagctttgatttacttcacaccccaaacaaa
tccccggtcagctatgtaaagcatatttctgaaagtcttggtgcacagcttaatcctgac
gtttcatggactagttctttgaatacaccaccagcagttccatccaccctgattttatcc
aagactgatgaggaaccgtgtccaccgagtgctactcctgacagaaattttgttattgtg
cgggagcttttcccttctctgtcaaaaggctccacaggtgatgcacctgaaaacaacaac
gtagctgatgtttctcaaggtgctgtttccactgaggcccatgaccgttctcacggtacc
ctcaacgaatctgcttggcagcagaaagttccagatgctattgaggacggagaagttcgc
agcacggtggcagaagttatcaatggagctgaaaatgttctctctattttctttgccaac
agtagttcagctctgagaaaagtgaagcatgaaagactcaagcggaagcaaaacattcag
ataaaggagactgattgcagctctgcagtagcaccgtcggcatgtaaggctgcagctgct
gaagaggaagccattgatgcagaatctgacagatttccctcaagcccgctggtcaaaact
ggacatggtgcaatcagccaatggtctccattgagtctgtcagaaatccaatcttgtact
gagaatagcactatcttaaaagaaagactgcaaggtgaggctaattctagcccactttct
tggccatcgggcagaatcacagactctggatttattaggaaaaagagactatttgttgac
agtgttaggactttgaagagcaaagaagaaaaagattgtcaatttcagaagatggcttta
ttatcaggaattcctgaatccattaacacatctctcatgcctggacaagaaatgaatggg
aagcatttggagaaactccaaccggaagcagatttctgcggcactgggaatagtgaactg
aaaaaaggctctgaagaggctaaagtccaggatctggacatttcgcagctttccagagat
tttgcgcaagacttcagccaaatgtcggactgtattcaacagagtaaagtagctgaagat
actttttctacatcagcatgtctctctgccctgaaacaggcaagggagaaagaaaggcaa
gcaaccttacagcataacatggatggtaacaatagaaagcatatttccacctttgatcaa
agttaccacatcagtgaaggaattataaatgacagtggtttccagtctgctgtaacgaac
actactcatttgactgcaacgccacttggtccttgctcagagaacactggtcaaagtcag
cagtcctctggctttaagactgacatccacacagctagtcctttcccatctacaaaggga
ggaaatggaaaatcacatttggatgctgaggctggaaccactcttcccagtgtgcagaga
aacatcccacactggacactggaccccagaagagaaggcaagtcggatgcaaataggaga
tcaacaggacaaccaagtggtgcaaaaagagtggataatatgaactgcaagccattaaac
ggtcaatttcatgatgtcctgcaagataaaatggaagtttctgttccatctgccaacgca
tcaggatttaaaaccgcttccaataaaggtatacgcatttccacagctaacctggagcga
gccaagcatctctttgaagagactgaaggtaaaaagacttttaataatctgtccaccaaa
tgtgactctgcaactaaatataaaaataacatcagcgatggatcagtgcaaagtgtttct
tctaactcaaacccgctaccttctttgtgtaaaacatttgggaatttcagttcccagtta
acggcttcacaaaaagcggacgtaacggaactttgttctctcttggaagaagcagagagc
cagtttgacattacacagtccaaacctcccaaattgcaacagcattgtcaaagcaatggt
gcgactccaagaaaagctgcaaaagaacttgattctgattttcttgctggaataaatttt
gatgacagtttcagttcagatgctgaaaagcaggagaaacaaagtgcaaagccggacaaa
atggactcagtcttagatgataaagcaaatattggaacattaaacaccacggctcaatcg
acggattggccattgtcatatgcaccgatgaaagagaactcatctgcatcactctgtttg
aagtccacctctgaagatacaaggtatcattcttcagctaaacctaaaaaccgtgacagt
gctgagtacggtgaagccaccaaagtgcaaaacaccaatacttttgtgcttggtgtggga
tttaagactgcaggaggaaatctactgaatgtttccaaaaagtctctgagtaaagctcga
gctttgtttgcagatttggataagaatcctccagatgaggaatccacagacaagcaaaac
agtgaaatcgatgccaaaatggatcaaaagtgtaacttagataggaaagatataatattc
actccccaagaaaactctaatggtggggagggaacttcaaaagatggcaacgttgacaca
aacacgtgccaaagtggtttccacatggctagtgggaaacaaatcccaatttcagcaaac
tacatggaacaggcagacgcttttttcaaagaccgtgtcataatggagagtaatgatggc
atgtctgataagaacataaaacacgttcctgacaggtctgagaataagaaaaaccattct
gagggacatgttaatggatgcactaagtttgaaagtggaaatcctggactggtagcacgt
aacacaaaacgaccacatctggatgaagtgggaagtaaagttacacatgctttgcaaaat
gcagttcctttccatggaaagcaaattttgccttcaaagccttcctcctccgtgcttcgc
acgacatcaaaggatattgatttatctgccacagatgaaatgataactggttgtggattt
cgtacagccagtgggaaagacgtttccgtgacggcagatgctctaaaaagagcagaatgc
cttttgaaagagatccatacgcctgaggccatcaatgatcaaccaaatcaaaaagaaacc
tcaaaatcaggacagctcaacgatcgggttttacaaccagaaaaaagtggatttcagact
gctagtggaaaggttgttggcgtttcattggcggcgctaaagaaagcagaaacactgatg
aaggagtgtgcaggggttgaaggtgaaatcaatcctccattgttacatcacaagattcca
gttactggttcacatcgtgggaattggggtttttccgcggccagtggtaaacctgtggca
gtttcatccgaggccttacagaaggctaaagctttattcagtgacatcggtaaaactagc
ccagctgttccagacacaaggaccaagacaaaaaatgaagatgcccgagataatatggag
actgtacaacgtggtttcacaacagcaagtggagccaaagcccacgtgtcacggaagaat
ctcttaaaagcaaatcatcggctgaaagaatttgatgatttggttttgaccaaagcaatg
caagaggaggatgcttttttcagagagtttgatatggatgctgatgatgcaatgttgcca
gaagatgtgagtagcgtgggtggcagcaagaaaaaaattcctgctaaacttgatccggat
caaagggaggctcctacgatttctaaagaagctgcaggtgattctgttaaggacgtggac
gaacaagcacaacaaaaaggagacattttgacaccagagaaaagtggatgtcaaacaggc
agcggaaaagcaatcggttatttatctccacctcccaccaaaacttcaggtgaggcttca
aattcattgttaaatccatgtgaaggagttgaggataaaaagggtgcaacaacatccaga
tccaagctcacatctcttccatttaatggcggaggattttgtgctgccagtggtaagcct
gtagcagtttcatccgaggcccttcagaaggcaaaatctctgttcaccgaccttggtcac
atcgcagatttgccagacatatcacagaaaaggaaaagtgatgggaaccaagacaatggt
ggcaatacagtggggatgcgttgtggtttcacaactgcagggggagtaaaagtccatgtg
tcaaaaaaaagtctcatgaaagcaaaacatcttctgaaagaatatgaagacgcagatgat
ctcaaggatggcacgatggacagtgacggcaataattcagggagatgtaaaagtacagaa
aatataagtggaagacaccatgtgaagcaaagcctttccaaatcaaatcagcatcagagg
gaaatggcagactttcctaaagagcatgaacatggaagcaccgagtactcagacaaaccg
atgaaacaaaaggaaatcactgtgccacaaaagggtggtggctttcagacagccagtgga
aacgtcgttgccatttcatctgaagctctgaagagagcaaaaatcctgttaagtgactgt
gaagaagcttcatcatcacatttcaagcttccagttactgatccagtttccaagagttgt
gggttttctgcagcgagtggtaagcctgtggtcttttcttctgaggctttacagaaggct
aaaactctcttcggtgacatcagtttgagcaaagacactgcagctatttcagacacgaag
aaaagggatgagaaatgtgaagaagctgaaaaaaacagagggcaaatacactgtggtttt
tcaactgcggcaggacaaaaagtcctcgtatcagagaaaagtcttttgaaagcaaacgac
cttttgaaagagtctgatgatggtgaatgtcattattctttttcaaattcaacaacctca
caggacacccataagtcagattcatcaaaagggaaatatctgaacagaactttaaattcc
actgttaccccggatgatggcaagggcaaccctccagagagagagacgtccttaaatgat
gagccattctctgctttgaagcagagtgaccatctaaacaaaacagttgtaagttcaagc
atacaaggctgtagttttatcaaagaaaagacacgatgcaccagtgtgtttaagtttcaa
gaggacaaagttgtcacatcaggggcaggtagcctaacggacatccctgaacaagacgtg
ccacgtgtgctgaactgtaatataaatcaaacaagcaggaaaaatccatctggagttgca
aaagcagacgagtcttcagttctaaatcttcagtcacttgacctcagcggctgcaccgtc
acgcagcagaagtttctggctcaggaggcattggactgcacaaaagccttgctagaagat
gaagatgtagcaggccaaagtctaactttagaaaatatgcccagtagcggatctacagaa
gaacaacgtacgaggaaaagagtaatgggagatccagaccatatcggtcagcctccctca
aaaagacgattactggaagaatttgacaggactattaatggttcgagaggctcagtgctc
catcctgttaaaagttctccgattggtttaatgaaagacaggggcgttttcagatatggt
ggctctcttcatccaaacatcacaaagccattcagtgaaagaaaaagcaatgtaactaca
gtattccaaaagacaccacttgcacaacagtcgaccccaggagactgcagatcagcctct
tccaaggttcctgcatttgttcctccatttatcaaaagtgcaaaaatggagactggcaag
aatccagcgcccaaagaaaatgcaagcgtgtctacatttgttcccccgttcaaaaagcaa
aagactatcctgcaggagagcttctctaaacaacaggaccatcaacccctaacagggcag
cccaacagcaacacctatgtaccaccaactaggaaaatccaagacacaacagatgtcatt
tcttcagttggcatggcaaacactaatacagtgaataatcaaagtgttcctgttacttgt
ggatcagccagttctggtgcagatgtatcacacgtggatgccacatcttctagaaaccaa
gatgttccagatgatcccgagaacattgagctggcacgggatatgcaagacatgaggatc
aggaaaaagaagcgtcaaaccatccgacctctgccagggagcttgtttctaacgaaaacc
tcaggagtggcaaggaccccgttaaaagtaggagtgaatggaaatcctccgagaagatac
accccagaacagctatacgcatatggagtccataagcacgctactgaaatcactagtgag
actgcagagtcttttcgctttaatttgctccagttcatcaaacacgaagcatttcttgat
ggaggtggtgttcagcttgctgatggggggtggctgatccccagcaatgattgcactgca
ggaaaagaggaattctatagagcattatgtgacacgccaggtgtggatccaaaactgatc
tctgaagcgtgggtctacaatcactacagatggattgtgtggaagcaggcctctatggaa
agatcttttccagaaacgatgggcagcatctgtcttaccccagagcaggttctcctacag
cttaagtacagatatgatgtcgaggtggaccacagccgcagatcagctctgaagaagatc
atggaaaaggatgacacagcagccaaaagtcttgttctctgcgtatgtgagaccctctcc
agaggtcaaccccagagcagacagagtaacaatggtgccaagacaccacaaagtgctgat
tccaaggtggagaatccatatgcagtggttgggcttacagatggctggtatgctattaaa
gcccagctggatgaacctctgactgccatgctggaaaagggtttactggctgttgggggc
aagttgatcatccacggggcccagctgacggggtcacaggacgcttgtccccctctcgag
gcacctgaatctctcatgctgaagatctgtgccaatagcagcagacgtgtacgatgggat
gctaaactgggatttcacagagatccacggccattcctacttcctgtctcgtctttgtat
agcactggaggacccgttggatgtgttgatattgttatagtgagaagctacccgatccag
tggatggagagaaaaccagacggaggagttgtgttccggtctgttcgagcagaggagaag
gaggccaggcgatacaacagtatcaggcaaaaggcaatggagatgctttttatgaagatt
caagtggattttgaaaaggaggagaaagggagaactgaacctaaacggagaaggcaaacg
atcagtgatcaggatgttgcccgtctggaggatggacaggacctttatgaagcagtggga
aacgatccggcttacctcgaggctcatttgagtgaacagcagttggaaacgctacgtagc
tacaggcattcactgatggagaagaaacaggctgagctgcaggatcgataccgccatgct
ctggaggaagagaacacacagatgaactgtcccaaaagagatgtgacgcctgtgtggaga
ctcagcattgctgactctatggcccatcccagctgtgtttcccagttgaatctttggaga
ccctcctctgatcttcaggctctattgaaggaagggtgccgatacaaagtttataacctt
gtgacttcagacggaaagaaacgcagcagcattgaaacagttcagctcactgggacaaag
aaaacccagtttcagcaacttcaggtgtcccaggaatggttatcggaacgttttcaacca
agagtctcaacaaattttgtgaatctacaaaacccagacttccagcccctgtgtggagag
gttgacctcacagggtgtgtcatcagcatcatagatggacagggttcttctcctgcattt
tatttggctgatggacagctgaactttgtgaaagtacgctgtttcagcagtctctctctg
gtcggcctggaggatgtgcttaaaccacgagtcctgttggctctgagcaacctgcagctc
agaggtcagtccatgtatcccactcccgttgtgtacgctggagacctgactgtcttctct
acaaaccctaaggaagtgcatctgcaggagtctttcggccacctcaaaagtgtgctccag
tgtcaagagagcttttacctaaatgcagaggagaagctttcagatttagtgaaatctgaa
ggcctcagctcgatttcctctccggctttgaaaccacaaaccccagcgtctgcaacagac
agaggccaagactcaaagacaagtgtgacgtttcagaaaccagtcggaaaccacggatct
ttcacgcctgttaataaaaatacttctgcagtagctccctcaacagaaaacgaccggaaa
atccagaaaaggagaagagctctggattatctgtctcgtgtgccgtctccaccacctcta
tcccatctgagctcggtggcttctccctgtgtaaacaagacattcaacccgccgcggagg
tctgggaccccaggcactttaaaaactgcacacactccagctcaaaaaccctcagaggca
actgtggagcacgagctagtgaatgatgaggaactggctatgatcgatactcaggcactg
cttgttggggatgtatcatag
DBGET
integrated database retrieval system
