Cololabis saira (Pacific saury): 133443224
Help
Entry
133443224 CDS
T09849
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04115
p53 signaling pathway
csai04140
Autophagy - animal
csai04150
mTOR signaling pathway
csai04218
Cellular senescence
csai04910
Insulin signaling pathway
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
133443224 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133443224 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
133443224 (tsc2)
04218 Cellular senescence
133443224 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
133443224 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133443224 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133443224 (tsc2)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133443224 (tsc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
HEAT
Motif
Other DBs
NCBI-GeneID:
133443224
NCBI-ProteinID:
XP_061576650
LinkDB
All DBs
Position
1:33029662..33066624
Genome browser
AA seq
1903 aa
AA seq
DB search
MNKQPSKESLKDKVKGIFGLGPPRPPSKSTDAKPSEFIITNDILKELHPDCGLSNRVRMM
NHICDLAKMKKFEENAVEAVWMAVEDMLTPEQPPEARHAVLQLLRAIIQGQGERLGPLRA
YFFKVIRDYQPSNEDLSDRLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTADFLHVL
VNLVKFNSCYLDQNISIMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSDSLTFFI
ITLCRTVNVKEFCESCWKVSLMRKVLGTHLGHSAIYTMCRIMEEKVYMEDAPLLRGAVFF
VGMALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSHEIVLSITRLIKKYGKELQVVTW
DILLCVMDRLLQQIQTIGSVELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKR
PDASVLTLISYRAQSIQPAKDGWIQSLHRLMEKFFRNESRSVIRIKVLHILSFVLSTNRQ
LYEDELIEMVVIPQLSGIAEDRDPAVRKQATQLLVDLAEGCNTHHFTSLLDVIERVASRS
LACSGSLEVSDRDPTAESPMDDVRTAILGLLEILQSKLYSLPASHASRVYEMLISHLQLH
YKNKYCSAIASTIRLQVFDFFLMMRADSLHRIGVPNKDGAIRFSPYCYCDTGEAEKRVCD
KKPTGSTSPPAGSPAPAAAPPASTPPIRSAYLPYAHAFSILLQCLKMETDWKVLKLVLDK
LPWTLQYKVLLRASPCSLDQLCSTLCSMVTDRLISERLKKTPEGFSRTDVQLAVVPVLTA
ITSYHNYLEQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVKLTH
ISATVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHV
IAMWFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSPFRARSTSLNERPKSLRAAKV
AKAAAAVANSSSSPVKELRDLSAMDAFRSRSISVSEHAVRRMHPSTTTCSLGSADENAVT
QADEGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTI
TTSGGVRTQALLGLDMSERLGGGGEMTRSDPSLHTRMTKEAPAKLESQSSQQQNRSTRTR
VRSISGGHALRAGPAQSLSPLVSPSEGELTTPLSPSTGPPLDSTGPPSSSSTAPSAPPPL
KDNPSLAEFVPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSSVLMA
MEGVKEAPAQTASAPASTAAPAPTSITEPLTQTHSSVGGKPHLIQRSNTVGGSLWSLGVG
SAHPGPPAPGRLHRSISWADSVVVLEEGSGLTSANTTPDWMESEEFETLPSDPIFMSAEK
FTKTPPPGTLSRSSSTSSQDDEKSTLEEVSEGAIPIDQPTVGPSTPGSQGPELPFQSHSQ
SQGHGLNKSSSSPELQTLPEAFTKAALESESALGEAPRPRAPSEGKPQVQQAHFEKDKVE
GGAGGDVNGLGGQNQGGEGSGSSSQSGGVMRLAFPAAPAPSGPISPGGGHRPRGHTISVS
APSSRRERRTDRDSYHSRPGPSSNTEKIAGLSPSFVFLQLYHSPFFGNEANKPLLLPKTQ
VIDRAVKVLDQMPPYDTHKIGVVFVGAGQVNNEVAILSNEYGSNRYAAFLTGLGKLIHLK
DCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFHIATLMPNRESDKGCCNKKRHIGNDF
VMVVYNDSGEEYKLGTIKGQFNFVEVIIKPLDYECNLVTLQCRKDLEGLVDTTVAKIVSD
RNLPLLVRQMALHANMASLVHQYRANPSDAYASKWLARLRHIKRIRTRAQEDIQSRATPG
ISLTQGHTQQTKSFQQSMPASNPETSGQRKRLVSTVDDFTDFV
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacagccaagcaaggagagccttaaggacaaggtgaaggggatctttggtctg
ggaccacctcggccaccgagcaaaagcaccgatgccaagccctcagagttcatcattaca
aatgacattctcaaggagctccacccagactgtggtctcagcaaccgtgttcgcatgatg
aaccacatctgtgatcttgccaaaatgaaaaagtttgaggagaatgcggtggaggcggta
tggatggcagtggaggacatgctgactccagagcagccaccagaggcgagacatgctgtc
ctccagcttctgagggccattatacaaggacagggtgagcggctcggccctctgagagct
tactttttcaaggtgatcagagactaccagccatccaacgaggacctctccgacagactg
gaagtgttcaaggccttaactgagaatgggaaggacatcacgtacctggaggaagacata
gcacggtttgtcctcttgtggatggacataggtctcactgccgactttctccatgttctt
gtaaatctggtgaagtttaacagctgctacctggaccaaaacatctccatcatggttcag
aaaatctgtctgctgtgcaatagaacgacatcttcaacagatattgaggtggctctacag
gtgttggatgctgtcgtgtgttacaactgcctgccttcagattctcttacttttttcatc
atcacactctgccgcacagtcaacgttaaggagttttgcgaatcttgctggaaggtgagt
ctgatgaggaaagttctggggactcatctcggccacagcgctatttacaccatgtgccgc
attatggaggagaaggtgtacatggaggatgcaccgttgctgagaggagcggtattcttc
gttgggatggcactttggggcgcacacagactccctgccctcaaaaacacaccaacactc
gttctgccatctttctacaaggccatgtcatgtgccaatgaggtggtgtcccatgaaatc
gtcctctccatcaccagactgatcaagaagtatggcaaagagctgcaggtggtcacatgg
gacatcctgctgtgtgtcatggaccgactgctgcagcagattcagacaataggcagcgtg
gagctgaaagccatcgtgtacgagctgctgaccacagtagaagaactgtacgaacagaac
ggttaccacggctccacggagaagttcttcagtctagtagagaagtgtgctgacaagaga
cctgatgcatccgtgctgactcttatatcatatagggcacagtctatacaacctgccaag
gacggctggatccagagccttcaccgcctcatggagaaattctttagaaacgagagtcgt
agtgtgataaggattaaagtacttcacatcctgtcctttgttctcagtaccaaccgacaa
ctttatgaggatgagctgattgaaatggtcgtgatccctcagctcagcgggatcgctgaa
gacagggatccagctgtcaggaaacaagctacgcagcttttggtggatcttgctgagggt
tgcaacacgcaccacttcaccagcttgctggatgttatcgagagggtggcgagtcgttct
ctggcatgctctgggtccctagaggtttctgacagagaccctacagcagagtctcctatg
gacgatgtcaggaccgctatcttgggcctgctggaaatcctgcagagcaaactttacagc
ctgccagccagccatgcgagtcgtgtttatgagatgcttatcagtcacctgcagcttcac
tacaagaacaagtactgttcagctatcgcttccacgattagactacaggtgtttgacttc
ttcctgatgatgcgtgcagactctctccaccgtataggagttcccaacaaggatggagcc
attagatttagtccgtactgctactgcgacacgggtgaagcagaaaagcgcgtttgcgat
aagaagccgacaggatctacgtctcctcccgctggcagtcctgctcctgctgctgctcct
ccagcgtcgacgccgccgatacgttctgcttaccttccctacgcacacgccttcagcatt
ttactgcagtgcctcaagatggagacggattggaaggtgctaaagctcgttctagacaag
ctgccttggacgctgcagtataaagtgctgctgcgcgcatcgccgtgcagcttagaccag
ctgtgttccacgctctgctccatggtgacagatcgtctaatctctgagcggttgaaaaag
accccagaggggttttcacgcacagatgttcagctggcagtggttcctgttctcacggcg
ataacctcttaccacaactacttggaacagtcgagacagagggagctggttcagtgcctg
gagactggtctcatttaccgctgtgccaagcagtgtgtggtggccctgaccatgtgcacg
gtggaaatgccagacatcatgatcaagctcctccctgctctcatcgtcaagctcacacac
atttctgcaacggttgccatggcatctcctatgcttgaattcctctcgactctggtgcgc
ctccctcatctttatgccaactttgttgcggagcagtacgttagtgtatttgctatctcg
ctgccctacaccaacccctccaagtttaaccagtatattgtgtccctggcccatcatgtg
attgctatgtggttcatacgctgcagacttcccttccgcaaggactttgtgcagtacatc
acaaagggtttgcgttccaacgccctgctgccatttgatgacggtcatgagcaaagcccg
tttcgtgcccggagcaccagccttaatgaaaggcccaaaagtctgcgggcggcaaaagtg
gcaaaggcagccgcagctgtagccaatagcagcagctctccagttaaagagctgagggat
ctttcagccatggacgctttccgctcccgcagcatcagcgtctccgaacatgcggtccgc
aggatgcacccctcaactaccacttgcagtttgggttctgctgatgaaaatgcagtaact
caggcagacgaggggctcaaaactgtccacctggagctgacggagacctgtctggacatg
atggccagatatgtgttttccaacttctctgcattgccaaagaggtctcccatcgcagag
ttcctgttggcaggaggtcgtagtatgacctggttggtgggcaacaaactggtgaccata
acgaccagcgggggtgtcagaacgcaagcgctgttaggcctggacatgtctgaacgtctg
ggaggaggaggggaaatgaccaggtcagatccgtcgctccacacccgaatgaccaaagag
gctccggccaaattggaatcgcagtccagccagcagcaaaacaggtccacgcgcacacgc
gtccgctccatttcaggtggccacgctttacgtgcaggccctgcccagagtctcagtcct
ctggtgtccccctctgaaggagagttgactactcctctttctccctccaccggtcccccc
ctggatagcacgggccctccatcctccagctcgactgccccatctgctcctcctcctctc
aaagacaacccgagccttgctgagtttgtcccaatgctcacacaaggctgggcagagatc
tttatacgcagaccttcaggtaacacgagctggctgatgtgtctggagaacccgcccagc
cccttttcctccgagctcggcaacatgcccctgcaggagctctccagtgtcttgatggca
atggagggagtgaaggaggctcccgcccagacggccagcgctccagccagcacggccgct
ccggcgcccacatccatcaccgaacccttaactcaaacccacagtagcgttggagggaag
ccgcacctgattcagcgctccaacaccgtgggcggctctctctggtctctgggtgtgggc
agtgcccacccaggccctccagctcctggcaggttgcacaggagcatttcctgggcagat
tcggtggttgtgctggaggagggatcagggctcacctcggcaaacaccacgcctgattgg
atggagagcgaagagtttgagacgttgccttccgaccccatatttatgtctgccgagaag
ttcaccaagactccgccaccaggaacgctcagcaggtcgtcttccacgtccagtcaagat
gatgaaaagtcaactctggaagaagtgagtgaaggagcaattcccatcgatcagcccact
gtgggtccgtccacccccgggagccagggccctgaacttccgtttcagagccactctcag
tcccagggtcacggactcaacaagtccagctcctctccagagctgcagacgttgcccgag
gccttcaccaaggcggctctggagtccgagagtgcgctgggcgaagctcctcgaccccgg
gcaccttcagaaggcaagcctcaggtgcagcaggcccattttgagaaggacaaagtggag
ggaggcgcaggaggagacgtcaacggactggggggccagaaccaaggcggagaaggctcg
gggtcttcatctcagagcggaggagtgatgagattggcttttccagcagcgccagcgcca
tcaggccccatctctcccggcggaggccaccgaccccgtggtcacaccatctctgtgtca
gccccctcctccaggagagagagaaggacagatagggactcctaccacagtcgacccgga
cccagtagcaacacggaaaaaatcgctggactgagtcccagctttgtcttcctgcagctg
taccactctccgttctttgggaatgaagccaacaagccgctgctgttgcccaaaactcag
gtgatagaccgtgctgtgaaggtcctggaccagatgcctccttatgacacccataagatc
ggagttgtgtttgtaggagctggtcaggtcaacaacgaggtggccattctgtcgaatgaa
tacggctcgaaccgctacgccgccttcctcacaggcctggggaaattaatccacttgaag
gattgtgaccccgaccagatcttccttggaggacttgaccagtatggagatgatggagag
ttcacctactgctggcatgacgacatcatgcaggcaattttccacattgccactctgatg
ccaaaccgagagagtgacaaagggtgctgcaataaaaagcgacacattggcaatgacttt
gttatggtggtgtacaatgactcgggagaagaatacaaactgggcactatcaagggccag
tttaactttgtggaggtcattatcaaaccactggattatgaatgtaatcttgtcaccctc
cagtgccgcaaagatctcgagggcttagtagacacgacggtggcaaagatcgtctcagac
cgaaacctgccactgttagttaggcagatggccctgcacgcaaacatggcgtctttggtt
caccaatacagagctaacccctccgacgcgtacgcttccaagtggctggcaaggttacga
cacatcaagaggatcaggaccagggcccaagaagatatccagtctcgggcaacacctggt
atttcattaacccagggacacacgcaacagacaaagtctttccagcagagcatgccggca
tccaacccagagacctctgggcaaagaaaaagacttgtttccactgtggatgatttcacc
gattttgtctga
DBGET
integrated database retrieval system