Cololabis saira (Pacific saury): 133443354
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Entry
133443354 CDS
T09849
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133443354 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133443354 (exosc1)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133443354 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
133443354 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
133443354
NCBI-ProteinID:
XP_061576662
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All DBs
Position
1:complement(33321272..33328713)
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AA seq
204 aa
AA seq
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MGRLSSLLENMSPMKLCVPGDKLCSADDCIPGTGVYHRHGYIYSSLAGYVLRKNEGEELP
VISVVRETEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRAT
EKDKVEVYKSFRPGDIVLSKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPVSWCE
MQCPRTHSKEFRKVARVQPDYLQA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggccggctgtcctctctcctcgaaaacatgtcgcccatgaagttgtgtgttccaggt
gacaaactctgcagtgcagacgactgtattccaggtacaggggtgtatcatcgacacggc
tacatatactcgtcccttgcaggctatgtgctgaggaaaaacgaaggcgaggagttaccg
gtgatctcagtggtgagagaaacggaagcgcagctactgccagatgttggagcaatagtc
acatgtaaggttacgagcatcaatcccaggtttgccaaagtccacatcctttatgtcggc
tccacgccactaaaggaccgatttagagggacaatcagaaaagaagatgtgcgcgcaaca
gagaaagacaaggtggaggtgtacaaaagcttcagacctggcgacattgttttgtcaaaa
gttatttctctcggggatgttcagtctaactacctgctgacaacggcggagaatgaactg
ggggtggtggtggcacacagtgaagcgggtgcccagatggtccctgtcagctggtgtgag
atgcagtgcccccggacacacagcaaagagttcaggaaggtggcgcgggtgcagcccgac
tatctacaagcctga
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