Cololabis saira (Pacific saury): 133443695
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Entry
133443695 CDS
T09849
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133443695 (lingo1a)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133443695 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
133443695
NCBI-ProteinID:
XP_061576822
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Position
5:complement(5016206..5058343)
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AA seq
615 aa
AA seq
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MAAREATGQSYLVACWRPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETRLLDLSKNRIRTINPDEFSNFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTELDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINIIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNVSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNKQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITSKTIGRISVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDSLHQPNKTFAFISNLPTETGANGTKAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
STAVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagggaagcgactgggcaaagctacctggtggcttgctggcggcccattctg
atcttgatgctgggaaccgtgctgtctggctccaccactggctgcccatcccgctgtgag
tgcaatgttcaagagcgctctgtgatgtgccaccgaaagaagctcatgacagttcctgag
ggcattcctgcagaaacgagactactggacctcagcaagaaccgcatcagaaccattaac
ccagatgagttttccaactttcccaacctcgagcacctggagctcagtgaaaatactatc
tccactattgaacctggcgcattcaacaacctttatggcttgcggacattggggttgcgt
agcaacaagcttaagctgatccagctgggtgttttcactggtctgagcaatctgacagag
ctggacataagtgagaacaagattgtgatccttttggactacatgtttcaggatttgtac
aacctgcgctctttagaagtgggtgataatgacttggtttttatctcccaccgggctttt
catggtcttagtagccttgagcacctgagtcttgagaagtgcaacctgtcctctgtgcca
acagaggcttttacccaccttcacagtttgatcactctcaggctgcgacacctcaatatc
aatatcatacgggattactcttttaaacggctctatcgactgaaagtgttggaaatagcc
aattggccttacttggatacgatgactccaaattgtttgtatggattaaatctcacatcc
ctgaccattgccaacgctaatctgaccacgattccttatgtagccctgcggcacttggtt
tacctgcgctttcttaatgtctcatacaacccaatccataccattgagggaaataagctt
catgatcttctgcgtctgcaggaatttcacctggttggaggcaggctggcaatgattgag
ccctactctttccgtggcttaaactacctgaaaatcctaaatgtgtctgggaacagtctt
agcactttagaggagtctgctttccattcagttggcaacctggagacccttgcgttgtat
gataatcccttggcctgcgactgccgactattatgggttttccgacggcgttggagactt
aattttaacaagcagcagccaacctgtgcctcccctgagtttgtccaaggcaaagagttc
aaagactttccggatgttctacagccaaactacttcacatgtcgcaagtccaggattagg
gatcgcaaaccccagcagaagttcgttgacgagggagccattgttcattttgcttgccaa
gcagatggagatcctgctccagtgataatgtggctttctccacagaaaaagtttattacc
tccaagacaattggaaggatctctgtgctgccagatggtacccttgaggtgcgctatgcc
cagattcaagataatggcacttatgtgtgtatagccagcaatgctggtggaaatgacacc
tctctggctcacctgcatgttcatagctactcgcctgactcactacaccaacccaacaag
acttttgctttcatttccaacctgcccacagagactggtgctaatggtacaaaagccaat
gtcccattcccattcgatattaaaacattgatcattgcaaccacaatggggttcatatcc
tttcttggtgttgtgctgttttgcctggtgctgctgttcctttggagcagaggtaaaggc
aacactaagcataacattgagattgagtatgtgccacggaaatcggacgctggcatgagc
agcaccgcggtggatgctcctcgcaagttcaacatgaaaatgatttaa
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