Cololabis saira (Pacific saury): 133443697
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Entry
133443697 CDS
T09849
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa
KO
K11644
paired amphipathic helix protein Sin3a
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133443697 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133443697 (sin3aa)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
133443697 (sin3aa)
REST complex
133443697 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
133443697 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
133443697
NCBI-ProteinID:
XP_061576824
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All DBs
Position
5:6299830..6341898
Genome browser
AA seq
1277 aa
AA seq
DB search
MKRRLEDQETVFASQQRRLAGNTEAFQHRVLAPAPAPAVYEAVSENMQPTAGVQYSVPQG
YQVPPVAQNSGGHGHTPSPAVHPGPHHHSPAVQPHGPAVMSGHGHTAAPQASAQGHQQFQ
RLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLI
MGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITGASTQHQSPLPPVTT
TAAPAILTQPTPAKISKPLQPQAVTPSSQSNPSIPAYTSPRSPPVQLHPPISGTPTGPPL
QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ
EVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGFTTKKLQLNNK
QRPSQNGCQIRRHPTPGATPPVKKKPKLLNLKDSSGADPGKHGAGTESLFFEKVRKALRS
AEAYDNFLRCLVIFNQEVISRAELVQLVLPFFGKFPELFNWFKNFLGYREMCHIETYPKE
RATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDST
FVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLESVQRKISRMSAEEQAKFRLDNT
LGGSSEVVHRKAIQRIYGEKAPDIIDGLKKNPAASVPIVLKRLKTKEEEWREAQRGFNKI
WREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIETIYDERQEQASEENASPIMGPH
LTLAHEDSQILEDAAALIIHHVKRQTGIQKEDKYKIKQIIYHFIPDMLFSQRGELSDVEE
EEDEEDEEELELEDGVSKKHNGVPGSRSPSKSKLLFGNTAAQKLRGCHDDAYNLFFVNNN
WYIFLRLHQTLCSRLLRLYGQAERQIEEEVRERDWEREVLGLKKDKNDNPAIQLRLKEPM
DIEVEDYYSAFLEMVRNLLDGNMESSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHI
VSDEICVQVTDLYLAEGSSGAAGGAVSTQPSRSAAEAMYQRKAEQIMSDENCFKVMFLRN
AGQVQLTMELLDTDEENSDEPMEVERWSDYVGRYLNPDSTTPELREHLAQKPVFLPRNLR
RIRKYQKGREQMDKEACEGGKKTLEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALMRAH
QSHERVSTRLHKRFQAWVDAWVAEHVTRDMSAETDKWLMGEGRDGLLPCTTSRHPEVLHF
MNINKYRVKYGPPSKAP
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtctggaggatcaggaaacggtttttgcgtcccagcagcggcgcctcgct
ggcaacacggaggctttccagcatcgtgtcctggcccctgctccagcaccggcggtgtat
gaagccgtctccgaaaacatgcagcccaccgccggcgtccagtactccgtcccacaggga
taccaggtcccccctgtagcccagaacagcggcggtcatgggcacactcccagcccagcc
gtccaccccggacctcaccaccacagtccagcggtgcagcctcacgggcccgcggtgatg
tcaggacacggccacacagcggccccgcaagcctccgctcagggccaccagcagttccag
aggcttaaggtggaagatgctttatcttacttggatcaagtgaagctacagttcggtaac
caacctcaggtctacaatgactttctagacataatgaaagagttcaagtcccaaagcatc
gacactcccggggtcatcagcagagtttcgcagctcttcaaaggccaccctgacctcatc
atgggcttcaacactttccttcctcccggctacaaaattgaagtccagaccaacgacctg
gtcaacgtgacgacgcccggtcagatccaccacatcacccctcacggcatctcggtccag
aacatccccatcaccggagcgtctactcagcaccagtccccgctcccccccgtcaccacc
accgcggctccagccatcctcacgcagcccaccccggccaagataagcaagcctcttcag
ccgcaagcggtgacgccgagcagccagagcaatccgtccatccccgcgtacacctctccc
cgctcgccgcccgtgcagctccatcctcccatcagtgggacccccaccgggccgcccttg
cagaacaaccagcccgtggagttcaaccacgccatcaactacgtcaacaagatcaagaac
cgcttccagggccagccagacatctacaaagcttttctggagatcctccacacgtaccag
aaagagcagcgcaacgctaaagaggccggagggaactacacgccggctctgactgaacag
gaagtgtacgctcaggtagcccggctcttcaagaaccaggaggacctgctctcggagttc
ggccagtttctcccggacgccaacagctcagtgctgctgagtaaaaccaccgccgagaag
gcggagtcggtgcggaacgaccacggcttcaccaccaaaaagctgcagctcaacaacaag
cagaggcccagtcagaacggctgccagatccgtcgccacccgacccccggagccacgccc
cccgtcaagaagaagcccaagctgctgaacctgaaggattcgtcgggggccgaccccggc
aagcacggcgccggcacagaatccctgttcttcgagaaggtgcgcaaggccttgcgaagt
gcggaggcctacgacaacttcctgcgctgtctggtcatcttcaaccaggaggtgatctcc
agggctgaactggtgcagctggtgctgccgttttttgggaaattccccgagctgttcaac
tggttcaaaaacttcctgggctaccgggaaatgtgccacattgaaacgtaccccaaggaa
cgagccacggagggcatcgccatggagatcgattatgcttcctgcaagcgactgggctcc
agttacagagctctgcccaagagctaccagcaacccaagtgtacggggagaactccgctt
tgtaaagaggtcttaaatgacacctgggtctcgttcccctcctggtctgaggactctacg
ttcgtcagctccaagaagactcagtacgaggagcacatttacagatgtgaagacgagcgc
ttcgagctggacgtcgtgctggagaccaacctggccaccatcagggtcctggagtcggtc
cagcggaagatctcccgcatgtctgcagaggagcaggccaagttccgactggacaacacg
ctgggcggctcctcggaggtcgtacaccgcaaggccatccagaggatatacggagaaaag
gcgcccgacatcatcgacggcctgaagaaaaacccagcggcctcagtgcccatcgtgtta
aaaaggttaaaaacgaaggaagaagagtggcgggaagcccagcggggcttcaacaagatc
tggagggagcagaacgagaaatattacctcaaatctctggaccatcaaggcatcaacttc
aaacagaatgacaccaaagtgcttcgatccaagtccttgctcaacgaaatcgaaaccatc
tatgatgagcgccaggagcaggcctccgaagaaaacgccagccccatcatgggcccccac
ctgacgctggcccacgaggacagccagatcctggaggacgcggcggcgctcatcatccac
cacgtgaagcggcagaccggcatccagaaggaggacaagtacaagatcaagcagatcatc
taccacttcatccccgacatgctgttctcccagcgcggcgagctctcagacgtggaggag
gaggaggacgaggaggacgaggaggagctggagctggaagacggggtttctaaaaagcac
aacggcgtccccggcagcaggagcccctccaagtccaagctgctgttcggcaacacggcg
gcgcagaagctgcgcggctgccacgacgacgcctacaacctgttcttcgtcaacaacaac
tggtacatcttcctgcggctgcaccagacgctgtgctcgcggctgctgcggctgtacggc
caggcggagcggcagatcgaggaggaggtccgggagcgggactgggaacgggaagtcctg
ggactcaagaaggacaagaacgacaacccagccatccagctgagactgaaggagcccatg
gacattgaggttgaagactactactcggccttcctggagatggtcaggaatttgctggat
ggaaacatggagtcgtcccagtacgaggactcgctgagggaaatgttcaccatccacgcc
tacatcgccttcaccatggacaagctgatccagagcatcgtccggcagctccagcacata
gtgagcgacgagatctgcgtccaggtgacggacctgtacctggccgagggctccagcggc
gccgccggaggagccgtgtccacgcagccgtcgcggagcgccgccgaggccatgtaccag
cggaaagccgagcagatcatgtccgacgagaactgcttcaaggtgatgtttctgagaaac
gcagggcaggtgcagctcaccatggagctgctggacacggacgaggagaactcggacgag
cccatggaggtcgagcgttggtccgattacgtgggccgctacttgaacccagattccacc
actccagagttgagggagcatctcgctcagaaaccggtctttcttcccaggaacctgagg
cggatccggaagtaccagaaggggagagaacagatggacaaggaagcctgcgagggcggg
aagaagacgctggagaaggagaagatggagtgcatgttcaagctcaactcttacaagatg
gtgtacgtcttcaagtccgaggactacatgtaccgacgcacggccctgatgcgagctcac
cagtcccacgagcgggtcagcacgcgactgcacaagcgcttccaggcctgggtggacgcc
tgggtggcggagcacgtgacccgcgacatgagcgccgagacagacaagtggctgatgggc
gagggccgggacggcctgctgccctgcaccaccagccgccacccggaggtgctgcacttc
atgaacatcaacaagtaccgcgtcaaatacggcccgcccagcaaggcgccgtag
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