Cololabis saira (Pacific saury): 133443755
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Entry
133443755 CDS
T09849
Symbol
caprin1b
Name
(RefSeq) caprin-1b isoform X1
KO
K18743
caprin-1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133443755 (caprin1b)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133443755 (caprin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
133443755
NCBI-ProteinID:
XP_061576932
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All DBs
Position
5:complement(12838854..12860279)
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AA seq
699 aa
AA seq
DB search
MPSAMNANTTVQSASPEVGSAPGSMGSFALGGQSEVLKQVLCVIDKKVRNMEKKKGKLED
YKVKKNKGDGLNQDQLEALAKYQEITNNLEFARELQKTFIAMGQDIQKIVKKSARREQLQ
RDEAEQRRLRTVLELQFILDRLGDSTVRQDLKQGVGGTPLLTDGDLATFDEFYKLVGPDR
DQNVRLIDQYEDASVHLWDLLEGREKAVVGTTYKALKETLDQVLLSGYFDRIPSHQNGVC
EEEEEEEEEEEEPATAAAPTAAPAAAESSEAEEQTVDPETEVIEEFTDPIAVETTELFFP
PQFVNRQFIMESTYSGSEKEQGDEWTRETEAVGTLQQQPVQPAAPPVALETHPMNLTSPV
PPADPMARKQVVQDLMAQMQGTYNFMQDSMLEFDGQAIDPAIVSAQPMKPPQNMDVPQMV
CPPVHPDSRLTQSNSVPVQPEPTQVPIVSPTPPPMYQTPHTQDPRPSTESIDPIQTSMSL
SSEQPPPSTALPPASQTQVFQPVSKAPHTSGINVNAAPFQSMQTVFNLNAPVPPATETEA
LNQANQYQNSYNPAFNSQSPHPAEQTEMQSEQLQSVVGAFHSQDQSGGHQQPTQQGPGFG
RQGQSFYNSRGMSRGGPRNARGMINGYRGSSNGFRGGYDGYRPPFANTPSSGYGQAQFST
PRDYSNGNYQRDGYQQNYKRGTGQGPRGMSRGSAQAMRS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagccatgaatgcaaatacgacagttcaatctgccagcccagaggtgggatcc
gctccaggttcaatgggcagttttgcactcggaggacagtcggaagtcttgaagcaggtg
ctgtgtgttatcgacaaaaaggtccgcaacatggagaaaaagaagggcaaactggaggat
tataaagtcaagaagaataaaggagatggtctcaaccaggaccagctggaggccctcgcc
aaataccaggaaatcacgaacaacttggaatttgcacgagagttgcagaaaacatttatt
gcaatgggacaagatatccagaagattgtgaagaagtctgcgaggcgggagcagttgcag
cgagatgaggcggagcagcggaggcttaggacggttctggagttgcagttcatcctggat
cgactgggtgacagcactgtacggcaggacctgaaacagggagttggaggcacaccactg
ctgacagatggggaccttgcaacttttgatgagttctacaagttagtgggaccagatcgg
gatcaaaacgtgaggttgattgaccagtatgaagatgcgtctgtgcacctctgggacctg
ctggaaggccgggaaaaggctgtggttggaacaacgtacaaggcattgaaagagactttg
gaccaggttttgctgagcgggtactttgaccggattccatctcaccaaaatggagtgtgt
gaggaggaggaagaggaggaagaagaggaggaagagccagccacagcagcagcaccaacg
gcagcaccagcagcagctgagtcgtcggaagcagaagagcagactgttgatccagaaact
gaagtaatcgaagaattcacagatcccattgcggtggaaacgacagagttgtttttcccc
cctcagtttgtaaacagacagtttatcatggaaagcacttacagcggcagtgaaaaggag
cagggagacgagtggaccagagaaacagaggctgttggtacgttgcagcagcaaccggtt
cagcctgcagcgccccccgttgccctggaaacccaccccatgaacttgacttctccagtt
ccgcctgctgaccccatggcccgcaagcaagtcgtgcaggacttgatggcgcagatgcag
ggaacatacaacttcatgcaggactccatgttggagtttgatggacaggccattgaccca
gccatcgtatcggcgcagcctatgaaaccccctcaaaacatggacgtgccacagatggtt
tgtcctccagttcacccggactcccggctaacacaatccaactccgttcctgtacaacct
gagcccacacaagtccccatagtttctccaacacctccaccaatgtatcagactccacac
acgcaagatcctcgaccctcaacagagtccatcgaccccattcagacttccatgtcatta
tcatcagagcagcctcccccctccaccgccctccctcctgcctcacagacgcaggttttc
cagcctgtttccaaagctcctcacaccagtggcatcaatgtcaacgcagctccattccag
tcaatgcaaacagtgttcaaccttaatgctccagtcccgccagctactgagacggaggcg
ttgaaccaggccaaccagtaccagaacagctacaatccggccttcaacagtcagtcgccg
catcctgcagagcaaacggaaatgcagtcggagcaactacaatctgttgttggtgccttc
cactcccaagaccagtctggaggtcaccagcagcccacccagcaaggcccgggcttcggt
agacagggtcagtctttctacaacagcagaggcatgtctcgtggtggaccccgcaacgcc
agaggaatgattaacggctacagaggctcctcgaacggattcagaggtggttatgacggt
tatcgtcctccctttgccaacactccaagctctggttacggacaagctcagttcagcaca
cctcgggactactcaaacgggaattaccagagggacggttaccaacagaactataagcgt
ggaacgggccagggacccagaggaatgtcaagaggcagcgctcaagcaatgcgatcctga
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