Cololabis saira (Pacific saury): 133443775
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Entry
133443775 CDS
T09849
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6-like
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133443775
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
133443775
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
PH_8
PH_15
HrpA_pilin
Motif
Other DBs
NCBI-GeneID:
133443775
NCBI-ProteinID:
XP_061576975
LinkDB
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Position
5:complement(14430964..14454857)
Genome browser
AA seq
1246 aa
AA seq
DB search
MSSGMQKPTVAPKPKLAQYQRAGPSPPIPKRDGLSQPSPATQRKAKPALAPKPCLAKLTP
KSKPLISKSQSQTSALETPTTVGRLNSENGLQQGGKKPDWDYVIPICLCSQENCSCIRNR
NLKKTEKDFETPLRDRTVENREAVLTSRETLDHHQGKAGNGNSQVINVSNRKPLHETFIA
DKDPNTDSDTSSPEVSVKPRLPHTTLYDEERANAIFQSVPGQGPEDVASEETRLSPPKST
SRKPLHVPVPRKDRTAVQVHQEKVEGQREETAIEEGREEDVKECKMSLDGMGSSFSSVSG
PESENKLPVFLSARRACGPPVPPPRKKPFLCNPKKTPTSAPQTPPKDGQEDDLAWESSIY
EREISVDGDDEEIQREREAECGSTDSHLLSPPEINQCRSVATAAEENAMANVTPKKPQRH
KSPVLMKKREFLEEDEAEKLEDYEAIQVCPLRHGAPEEQMTRELSLPPNENSSNSLSTAV
YAKSSRSSLNKQKAKSFSTADVARSDVQKRNTFRKLLDSKLKMFPKMIAKGGQSPVTGSE
QDLLRDQSTFEDPSAERKLSCPLIGVEQSVDGDEFEEVLPRKSHVYEDILDYTNVDVGKA
ESSPPGSLSQPWHNSLYDDEGIYEEQLPYMSLVKTQCQTPKECDSSVDEEMAFQNEAPSD
DDIEANTSDDDEEDEDDSSSASSKGDPDQPDQTTTPTGQKKSKIHHIATEIMSSESVFVD
VLKLLHVDFRDAVTAAPRQSGKPVIEERLLNQILYYLPQLYELNQDLLREFTQRVAKWDG
NSQLADIFLKKGPYLKMYSTYIREFDKNVALLVEQTKKNAAFGAVVKEFEASPRCANLAL
KHYLLKPVQRIPQYQLLLTDYLKNLSEDSNDYKDTQAALAIVKEVANHANDIMKQGDNFQ
KLIQVQCRLNGHHEVVQPGRIFLKEGVLMKLSRKVMQPRMFFLFNDTLLYTTPVQSGQYK
LKNILSLAGMKVSKPSQEAYQNELNIESVERSFILSASSATERDEWLDAISTAISDFTKK
KISFISGKPLDEVEISDGSPLGSKAPIWIPDPRTTMCMICTCEFTLTWRRHHCRACGKVV
CQSCSSNKYCLEYLKNQLARVCDHCFVILQEQKSEMASSAAISPGNKATFAFSRRTKKIP
AALKEVTANTDNSSMSGYLQRSKHSKKQGKRLWFVIKDKVLYTYAASEDVAALESQPLLG
FLLKVDSSKKTQFTLYHKNILYYIFRADDVQTAQRWIDSFKDAAVL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaggcatgcagaaaccaactgtggcacctaaaccaaagttggcccagtaccag
agggcagggccgtctcccccaatccccaagagagatggcctctcgcaaccttctcctgcc
acccagaggaaggctaaaccagccctggctcccaaaccctgcctcgctaaacttaccccc
aaatccaagccactcatttcaaagagccagagccaaacgtctgcattagaaaccccaacg
actgttgggcgtctgaactctgagaatggattacaacaagggggcaagaagcctgactgg
gattatgttattcctatttgtctttgtagccaggaaaactgctcgtgcatcaggaacaga
aacctaaagaaaacagagaaagactttgaaacgccactccgggataggactgtggaaaac
agagaggctgttcttacgtcccgggaaacgctcgatcaccaccaggggaaggcaggcaat
gggaacagccaagtgataaacgtttctaatcgcaaacctctacatgagacatttattgcg
gacaaagatcccaacacagactctgatacctcaagtcctgaagtaagtgtcaagcctcgt
cttcctcacaccacgttatacgatgaggaacgtgccaatgcaatatttcaaagtgtacct
ggacaaggaccagaggatgttgcctcagaagaaaccaggttgtccccgcctaaatcaacc
tctaggaagcctctccatgtccctgtaccacggaaagaccgaacagctgtccaggtccat
caggaaaaggtggagggacagagggaagagactgcaatcgaggaagggagggaagaagac
gtcaaagagtgcaaaatgtcattagacgggatgggcagctcattctcgtctgtcagcgga
cctgagagtgaaaacaaactgccagtttttctgtcggcgagaagagcttgtggcccacca
gtacctccgcccaggaagaagcctttcctgtgcaatccaaagaaaacaccaacctctgct
cctcagacaccaccaaaggatgggcaggaggacgatttggcttgggaaagcagcatctat
gagagagagatatccgttgacggggatgatgaagagattcagagggaaagagaggctgaa
tgtgggtccacagatagccatttgctcagtccaccagagatcaaccagtgtcgtagcgtc
gcaacggcagcggaggagaacgcgatggctaacgtcactccaaagaaacctcagagacac
aaaagcccagtattgatgaagaaaagggaatttcttgaggaggacgaagcagagaagtta
gaagattatgaagcaatacaagtctgtccgctacgacatggtgctccagaggaacaaatg
acaagagagctgtctttgccgccaaacgagaattcaagcaacagcctttcgaccgctgta
tacgccaaatcttctcgttccagtctgaacaaacagaaagccaaatccttctctactgct
gatgtcgctcgctctgacgtacagaagagaaacacttttcggaagctcctagactcaaaa
ctgaagatgtttcccaagatgatcgcgaaaggcggccagagcccagtgaccggttctgaa
caagatttgctcagggaccagagcacctttgaggatcccagcgcggagcgtaaactctcc
tgcccgctaatcggagttgagcagagtgtggatggagacgagtttgaagaagttctcccc
cgtaaaagtcatgtctatgaggacatattggactacacaaacgtggatgtgggcaaagca
gagtcatctcctccgggctccctctctcagccatggcataattcactttatgatgatgag
ggcatttatgaagagcagttgccatatatgtctctggtgaaaacacagtgtcagacgcca
aaggaatgcgacagttctgtcgatgaggagatggctttccagaacgaggccccctcggat
gacgatattgaagccaacacctccgacgacgacgaggaggatgaagatgatagcagttct
gcgtcgagcaaaggcgaccctgaccagccagatcagactacgacgccgactggacagaag
aaaagcaagatccaccacatcgccacggagatcatgagctctgagagtgtgtttgttgat
gtcctgaaactgctacatgttgacttccgtgatgcagtcaccgcggcgcctcgtcagagc
gggaagcctgtgattgaggaacgtctcctgaaccagatcctgtactacctcccacagctc
tatgaactcaaccaagacttgctcagagagttcacgcagagagtggccaagtgggatggg
aattctcagctggcagacattttcctgaagaaggggccgtatctaaagatgtactccacg
tacatccgggagtttgacaagaatgtggctctactggtcgaacagactaaaaagaacgca
gcattcggcgcggtagtgaaggaatttgaggcaagtcctcgttgcgccaacttggcactg
aagcattacctactgaagccggtgcagagaattccccagtatcagctgctgctcacagac
tacctaaaaaacctgtcggaagactcaaatgactacaaagacacacaagctgccctggct
attgtgaaagaggtggccaatcacgccaatgacatcatgaaacaaggggataacttccag
aagttgattcaggttcagtgtcgtctcaatggccaccacgaggtcgtccagcctggacga
atcttcctcaaagaaggtgtcctgatgaagctgtccaggaaggtcatgcagccgagaatg
ttcttcctgttcaacgacacgttgctgtacaccactccagttcagtcaggccagtacaag
ttaaaaaacatactgtccctggctgggatgaaggttagtaaaccaagtcaggaggcctat
cagaatgaactgaacatagaaagcgtggagcgctccttcattctctccgcaagttcggcc
acggagcgagatgaatggcttgatgcgatatccactgccatcagtgacttcaccaagaag
aagatcagttttatatcaggcaaacctctggatgaggtagagataagtgatggatctcct
ctgggatccaaagcccccatatggatccctgatccgcggaccaccatgtgcatgatctgc
acctgcgagttcaccctcacctggaggagacatcactgccgtgcatgtggaaaggtggtg
tgccagtcttgttcctccaacaaatactgtcttgaatatctaaagaaccagttggcgcga
gtctgtgaccactgtttcgttatacttcaggaacagaaaagtgaaatggcctcgtcagca
gcgatatcccctggaaacaaagccacctttgcgttctccagaaggaccaagaagattccc
gcagcccttaaagaggtgacggcgaacacggacaactcctccatgagtgggtatctgcag
aggtccaagcacagtaaaaagcagggcaagaggctatggtttgtcattaaagacaaggtc
ctgtacacgtacgctgcaagcgaggacgttgcggccttggagagccagcctctgttaggc
tttttattgaaagttgattcctcaaagaagacacagtttacactctaccacaaaaacata
ctgtattacatttttcgagctgatgatgtccagacggctcaaagatggatcgactcattc
aaagatgcagctgtactgtaa
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