Cololabis saira (Pacific saury): 133443782
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Entry
133443782 CDS
T09849
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3 isoform X1
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133443782 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133443782 (taf3)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133443782 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
133443782
NCBI-ProteinID:
XP_061576986
LinkDB
All DBs
Position
5:complement(14791757..14808000)
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AA seq
935 aa
AA seq
DB search
MCESYARSLLRVSVAQICQALGWDAVQLTACDLLSDVLHRYIQQLARVCHRYSELYGRTD
PVLDDVSQAFRLMGVSLGELEDYVNNLESVPFPQQTPLFPVSKNNVLQFPQPGARDVEER
KDYIPDHMPPLVSLQEEEEEEEVPPDMGTSAEAMQVALEEDEEEIDEDETVNDENHPLKR
HLDSPDAALGMMPNSKRPRLYSGLSPEWGVEPREPLISLNPQRVLPGILPSHDSFDQLSP
ETPPGVPPSFRPQPIMPKHFDQKGLTTPGKKTKISSPGRQRTKSPKRVVPVPVAGSPIHS
PKPSKERKKSPGRTKSPKSPKSPKMSSAKAPQPPSKTEGLHKLQLSALNERMGKENIRNI
EERELAEGAFKKLEPDNTAIDDSIDAVVARAGAEAEPDPFAFSSGSDSDSNGFSSPKRLT
IMEPFTPKLPIGEGNLLKETSKPPHLPLHAGMGGNWTLEDSINEVVRKANQGGPSAPPQS
QAEYVSSGSASPPTPQPLLKVFEEKNNIVASVDVKKKTKKELKFKMKKKEKDKPKDKDRE
KDRSKLKEKNKDKNKDKSKEFSKDVKMPWKEFGMKIEDHFLQQDLTLPEGSIKAKSKDGD
GSKKEKEKHKDKKKDKEKSKKDKDKKEKGKDKNKEDKQKQPGLSAFALGEVSALFSPATC
HRITTMLPPLAPILQEKETKSKEKDKKKDKKEKKKKKDKEKDKEREKAKEKEREKEEKRK
EKEREKEKREKEKEKEKERIRLEKVKTETPAALPSPVIPRLTLRVGGQDKIVISKVVPNA
EAKTPAPKTPAAKSGPGNRPRTPPPLPILPLVVPTLPAVPSPLPPPLPPAASLLAPPSML
TPAPSIKTPVRSVVTETVSTYVIVDKWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPC
VGLVAAPPDEQQWFCIKCSSKKKDKKHKKKKHKPH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctacgctcgctcgctgctgcgcgtctcggtggcgcagatctgccaggct
ctgggctgggatgcggtgcagctcactgcgtgcgacctgctgtccgacgtgctgcacaga
tacatccagcagctggcccgggtctgccaccgctactccgagctgtatgggagaaccgac
ccggtgttggacgatgtcagccaggcgttcagactgatgggggtgagcctgggcgaactg
gaggactatgtcaacaacctggagtcggtgccctttccccagcagacacccctctttcct
gtcagcaaaaacaatgtcctgcagtttcctcagccgggagccagagatgtggaggagcga
aaggattacattccagatcacatgccaccgctggtctccttacaagaagaagaggaggag
gaagaggtccctcctgacatgggcacctccgctgaagctatgcaggtggctctagaagaa
gacgaggaggaaatcgacgaggacgagacggtcaatgacgaaaaccacccgttaaagaga
cacctggacagtcccgatgcggcgttggggatgatgcccaactccaagagacctcgcttg
tactccggtctcagcccggagtggggggttgagccccgggagcctctcatctccctcaac
ccccagcgcgtactgccgggcattttgccttctcatgacagctttgaccagctgtcacct
gaaacaccaccgggagtccccccttctttcagacctcagccgatcatgccaaaacacttc
gatcaaaagggcctgaccacaccgggaaagaagacgaagatctcctcccctggcaggcaa
cggactaagtcccctaaaagggttgtgcctgttccagtcgctgggagtcctatccattct
ccaaaaccatccaaggaaaggaagaaatccccaggcaggacgaagagtcctaaaagcccc
aagagcccaaagatgagctctgccaaagcacctcaacctccgagcaagacggaagggctg
cataagctgcagctgtctgcactgaacgagaggatgggcaaagagaatatccggaacatt
gaggaaagggagttagccgaaggcgccttcaagaaactcgagcctgataatacagccatt
gatgactctattgacgccgtcgtagccagagcgggtgctgaggcggaacctgatcccttt
gctttttcctctggctcagattccgatagcaatggcttctccagccccaagaggctgacc
attatggagccatttacacccaaactccccataggggaagggaacttgttaaaggagaca
tcaaaaccacctcacctaccgctacacgcaggcatggggggaaactggaccttggaagat
tcaatcaatgaggtggtccgaaaggccaaccaggggggtccgtccgctcccccccagagc
caagcagagtacgtgtcgtcaggatcggcctcgccgcccactcctcagccgctgctcaaa
gtgtttgaggagaagaacaacatcgtcgcctcggtggacgtgaagaagaagacgaaaaag
gagctcaaatttaagatgaagaagaaggagaaggataagccgaaggacaaagacagagaa
aaggacaggagcaagctcaaagagaagaacaaggacaagaacaaggacaaaagcaaggag
ttttccaaggatgtcaaaatgccctggaaggagttcggcatgaagatcgaagaccacttt
ctccagcaggacctgacgctgcccgagggctccatcaaggcgaaatcaaaagatggagac
ggctcgaagaaggagaaggagaaacacaaagacaaaaagaaagataaggaaaaaagtaaa
aaggataaagataagaaggagaagggtaaagacaagaacaaggaggacaagcagaagcag
ccgggcttatccgccttcgcgctgggcgaagtgtctgccctgttcagccccgcgacctgc
caccgtattaccaccatgctgccccccctggcgcccatcctgcaggagaaggagaccaag
agcaaggagaaagataagaaaaaggacaagaaagaaaagaaaaagaagaaggacaaggag
aaggacaaggagcgggagaaggcaaaagaaaaggagcgggagaaggaggagaagaggaaa
gagaaggagcgggaaaaggagaaacgggagaaggagaaagagaaagaaaaagagagaatt
cgactggagaaggtgaagacggagactccggcagccttaccgtcgccggtcatccccaga
ctgaccctgcgggtgggaggccaggacaagattgttatcagcaaggtggttcccaatgcc
gaggccaagacgccagcaccaaagacccccgctgccaagtctgggcccggaaaccgtccc
cggacgccccccccactcccgatcctccccctggtggttccgactcttccagcagtcccg
tccccgctcccgcctcctcttcccccggcagcatcgctgctggcgccgccctccatgctg
acgcccgctccttccatcaagacgccagtccgcagcgtagtgaccgagaccgtgagtacc
tacgtgattgtagacaaatggggaaaccagatctggatttgtcccggatgcaacaagcct
gacgacggcagtcccatgatcggatgtgacgactgcgacgactggtaccattggccttgc
gtcgggctcgtcgcggctcctccggatgagcagcagtggttctgcattaaatgttccagc
aagaagaaggacaaaaaacacaagaaaaagaaacacaaaccacactga
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