Cololabis saira (Pacific saury): 133443832
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Entry
133443832 CDS
T09849
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03320
PPAR signaling pathway
csai04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133443832 (pparab)
03320 PPAR signaling pathway
133443832 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133443832 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
csai03310
]
133443832 (pparab)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133443832 (pparab)
Nuclear receptors [BR:
csai03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
133443832 (pparab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133443832
NCBI-ProteinID:
XP_061577094
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Position
5:complement(17662488..17719486)
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AA seq
469 aa
AA seq
DB search
MVDIESHYQPPSPLEDSVLDSPLCASDDFMGGIEELHHLSQSIDEDALSSFEIPKYQSSS
NGSEGSTLLDALTPASSPSSVVYGAAPSQDDFSSSSSSLNLECRVCADRASGYHYGVHAC
EGCKGFFRRTIRLKLDYDKCDRRCKIQKKNRNKCQYCRFQKCLAVGMSHNAIRFGRMPQS
EKLKLKAEMVTGEREVEDPHLADQKTLAKQIYEAYLKNFNMNKAKARTVLTGKTSTPPFV
IHDMETLQLAEQTLVAKMVGSAAALKDREAEVRIFHCCQCTSVETVTELTEFAKSVPGFS
SLDLNDQVTLLKYGVHEALFAMLASSMNKDGLLVAYGSGFITREFLKSLRRPFSDMMEPK
FQFAMKFNALELDDSDLALFVAAIICCGDRPGLVDVAHIEAMQESIVQVLQLHLLANHPD
DAFLFPKLLQKLADLRQLVTEHAQLVQEIKKTEDTSLHPLLQEIYRDMY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatagagagccactaccagcctccgtctccgctggaggactcggtgctggac
agcccgctgtgtgcgtctgatgacttcatgggggggatcgaggagctccaccacctctcc
cagtccattgatgaagacgccctgagctcatttgaaatccccaaatatcagtcctccagc
aacggttcagaaggttccactctcctagatgccctgacgccggcgtcgagcccgtcgtca
gttgtttacggggcggcaccaagccaggacgacttctcatcttcctcttcctcactcaat
cttgagtgccgagtgtgtgctgaccgcgcttcgggctaccactatggagttcacgcctgc
gagggctgcaagggtttctttcgacggacaatccgtctgaagctggactacgacaaatgt
gaccgccgctgcaaaatccaaaaaaagaaccgcaacaagtgccaatactgtcgcttccag
aagtgcctggcggtgggcatgtctcacaacgccatccggtttggtaggatgccccagtca
gagaagctaaaactaaaggcagagatggtgacaggggagagggaagtggaagacccccat
ctggccgaccagaagaccctggccaagcagatatacgaggcctaccttaagaacttcaac
atgaacaaagccaaggctcgaaccgttctcacgggcaagaccagcacccctccttttgtc
atccatgacatggagacactccagctggcagagcagacgctggttgccaagatggtgggc
tctgcagcagcactgaaggacagagaggcggaagttcggattttccattgctgccagtgc
acgtctgtggaaaccgtcacagagctcacagagtttgcaaagtccgtcccaggcttctcc
agtctggaccttaacgatcaggtgactcttctgaagtacggagtgcacgaggccctcttt
gccatgctcgcctccagtatgaacaaagacgggcttcttgtggcgtacggctcaggcttt
atcacccgggaattcctcaagagcctgcggcggccgttcagtgacatgatggagccaaag
ttccagtttgcaatgaagtttaatgcgctggagctggacgacagcgacctggctctgttt
gtagctgctatcatctgctgtggagaccgaccaggcctggtggatgtggcacatatcgag
gcgatgcaggagagcatcgtgcaggtcctgcagctccacctgctggccaatcaccccgac
gacgcttttctcttccccaaactgctgcagaaactggctgacctccggcagctggtcact
gagcacgcacagctggtacaggagatcaaaaagacagaggacacctcactgcacccactc
ctacaggaaatctacagagacatgtactga
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