Cololabis saira (Pacific saury): 133443880
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Entry
133443880 CDS
T09849
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b
KO
K27096
liprin-beta
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133443880 (ppfibp2b)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133443880 (ppfibp2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
LRRFIP
ADIP
ERM_helical
AAA_13
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
133443880
NCBI-ProteinID:
XP_061577176
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All DBs
Position
5:complement(21488864..21579624)
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AA seq
1021 aa
AA seq
DB search
MLPAVAMESEASHMLEAALEQMDDIIAGSKAAAMEFSSGTFNLGSPVSAGPLQVVQLAEE
LKLALELQPNQEGRESLRAQLPSETAQALIHWLQSGAVNLCSPANNETYQERLLRLEGDK
ESLVLQVSVLTDQVEAQGEKIRDLESSLQEHRQKLASTEEMLQQELMSRTSLETQKLDLM
DEVSYLKLKLVSMEESRTNAQPQDPTETKQDKAECVVNLISELQEQMCKFQEEISTRIQE
KRALEEQEARQGEPGGRPAQGCSPAVGLAGSDPALSGLQSWQHNGGRTVHDLIQEVQQLK
SKVESLEGEKSQYERKLRATKAEISELQQLLASKDAEIVCLQTQLLARGGSTNDNAERDQ
EYQRLKVGMESLLASNDEKDRRIEELTVLLGQYRKMRDVMAITHGSSEEELSSSLKLRAI
THKAHSDIVRLEMSSRGSSPLMLSSSPFQREIDSSFQNCMDTSLMSTGDTSFLNGLWHQR
RLLSSSLEELQSGSLQKAVEIQPVESESDVGAESPHAELNKYQTLPGKLSKKKELRAELS
SDRERDSEYLSPVKLSPARDSDYSLRPSERLEECMLSDQSPLSSGVDSGQQSPVSPDNRK
THRGIKKLWGKIRRSQSGSPVQVHDQETADFKRGGFRATAGPRLASSAKTRDLKLPFSKW
STEQVCDWLEDIGLGQYGLLARQWVTSGHTLLSAVPQDLEKELSMKNPLHRKKLQLSLKM
FGNKQLEKSAELDYIWVTRWLDDIGLPQYKDQFNDGRVDGNMLQYLTVNDLLFLKVSSQL
HHLSIKCAIHVLHVNKFNPNCLRRRPSNESRFSPSEVVQWSNHRVMEWLRSVDLAEYAPN
LRGSGVHGGLIMLEPRFSADTLAMLLNIAPQKTLLRRHLSTNFNNLVGAQAQQEKREYTE
AAGYTPLSITAKVKLKKLGFSNLTHLRRRRSDESTDYVCPIKSSSPQSGQAAVNGVQVRP
YAGFRGLSPILDREPPRDQMANAESTILQIEALSEGISNLTYLLSRDELRKELRRSQTAL
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgccgtcgccatggagtcagaggccagtcacatgctggaggctgcgctggag
cagatggatgacatcattgcaggttcaaaagcagcagccatggagttttccagcggtacg
tttaacctgggctctcctgttagtgctggtccgctgcaagtggtgcagttagccgaggaa
cttaaacttgctctggagctccaacccaaccaggagggcagagagagcctgagagcgcag
ctcccctccgaaacggcgcaggctctcatccactggctgcagagcggagctgtgaacctc
tgttctccagccaacaatgaaacctatcaagaacgactgcttcgactagagggagacaag
gagtctctggtgctgcaggtgagtgtcctgactgaccaagtggaggcgcagggagagaag
atcagagacctggaaagttccttacaggagcatcggcagaaactggcctccactgaggag
atgctgcagcaggaactgatgagcaggacttctctggagacgcagaagctggatctcatg
gatgaggtgtcctacctgaaactgaagctggtcagcatggaggagtcccgcaccaacgca
cagccgcaagatcccacggagaccaagcaggacaaagccgagtgtgtggtaaatctcatc
agtgagctccaggagcagatgtgcaagtttcaggaggagataagcactcgcatccaggag
aaaagggccctagaggagcaggaggcccgccagggggagcccggaggacgcccggcccaa
ggctgcagccctgcagtcgggctagccggctcagacccggccctgtctgggctccagtcc
tggcagcacaatggaggacggactgtgcacgatttaatacaagaagttcagcagctgaag
agcaaagtggagtcgctggagggggagaagagtcagtatgagaggaaactcagagccacc
aaggcagaaatctccgagctccagcagcttttggcttccaaagatgctgagattgtgtgc
ctgcagacccagctgctggccagaggcggcagcaccaatgacaacgcagagagagaccag
gaataccagaggctgaaggtggggatggagtctttgctggcttcaaatgacgagaaggat
cggaggatagaggagttgaccgttctgctgggacaatacagaaagatgagggacgtcatg
gcaatcacacatggaagtagtgaagaggagctgagtagtagtttgaagctcagagccatc
actcacaaagcacactctgacatcgtcagattagagatgtcttccagaggttcttctcca
ctcatgctctcctcctctccttttcagagagaaattgattccagttttcagaactgcatg
gacacgtcgctgatgtccacaggtgacacaagtttcttaaacggattatggcatcagcgc
aggttactctccagcagtctcgaggagttgcagagtggatctttgcaaaaggctgtagag
atccagccagttgaaagtgaatcagacgtaggggcagagagcccccacgcagagttaaac
aagtaccagactcttcccgggaagctgagcaaaaagaaggagctgagggcggagctgagc
agcgacagagaaagagacagcgagtatttatctcctgtcaagctctcacctgcccgtgac
agcgactacagtctgaggccttcggagaggctggaggagtgtatgctgtcagaccagtcc
ccgctgtcctccggagtggactctggacagcagtcccctgtctccccagacaacaggaag
acccacagaggcatcaagaaactctgggggaagatccgtcgcagccagtctggcagtccc
gtgcaggttcacgaccaagagacggcagactttaagaggggaggcttcagagccacggcg
ggaccacgactggccagctcagccaagacacgagatctaaagttgccgttttctaagtgg
agcacagagcaggtgtgtgactggctggaggacatcggactgggccagtacggcctcctt
gctcgccagtgggtcaccagcggccacacgttgctgtcggccgtcccacaagacctggag
aaggagctgtccatgaagaacccactccacaggaagaagctgcagctatctctgaagatg
ttcggtaacaaacagctggagaagtctgcagagctcgattacatctgggtcactcgttgg
cttgatgatatcggtcttcctcagtacaaagaccagtttaacgacggaagagtggatgga
aacatgcttcaatatctcactgtgaatgacttgttattcctcaaagtgagcagccagctg
caccatctcagcatcaagtgcgccattcacgtcctccacgtcaacaaattcaaccccaac
tgcctcagacgcaggcccagcaatgagagccggttcagccccagcgaggtggtccagtgg
tccaaccacagggtgatggagtggctgaggtcggtggacctggcggagtacgcacccaac
ctgaggggcagcggcgtgcacggaggcctgattatgctggagcctcggttcagcgccgac
acgctggccatgctgctgaacatcgctccacaaaaaacactgctgcggcgccacttaagc
accaacttcaacaacctggtgggagcacaggctcagcaggagaagagggagtacacggag
gcagcaggatacacccccctcagcatcacagctaaagtcaagcttaagaagttgggcttc
tctaacttgacccacctgaggaggaggcgctcagacgagtccacggactacgtctgtccc
atcaagtcgtcgtccccccagtcgggccaggcggcggtgaacggggtgcaggtgcggccg
tacgccggcttcaggggcctgagccccatcctggaccgagagccccccagggaccagatg
gcgaatgcggagagcaccattttgcaaatagaagctttgtctgaaggcatcagcaacctc
acatacctgctcagccgagacgagctgcggaaggagctgaggcggtctcagacggcgctg
gtctga
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integrated database retrieval system
