Cololabis saira (Pacific saury): 133443921
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Entry
133443921 CDS
T09849
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133443921 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
133443921
NCBI-ProteinID:
XP_061577257
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Position
5:23242742..23273970
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AA seq
548 aa
AA seq
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MAVWTRADKHGQLDLLLRDRWIRVAAELSRETLALTAEAEAAGPGGPGPGTGGGRWDSCS
PPAPAGLRNGLANGTDPGPGPGSRYGYGSPGPELGGPGGCDPPGPPGSPGGGSEALRKVR
VVKQESGGLGISIKGGRENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHD
MAVQALKKAGKEVTLEVKYIREVSPLFKKPSLVADLPWDGVRPQSPSFSGSEDSGSPKHS
GSPSTSKDRKVISLKMCFISRNLTMPDLENRLLELHSPDGQHTVVLRCKDGPTANSWFTA
IHTNIAALLPQALAHINAYLGASSAGSTHPHLKHIGWLAEQVQLEGGRQQYRPVVIALTE
KDILLFESVPWSRESWSMPLLTHPLLATRLVHSGSARSSPSQGSDLVFATRTGTGRGIES
HVFRVETHWDLSSWTRALVQGAHAAAELIKEVSIGCTLNRQDVRLTLHYEKGFTVTREPA
DPTGGAVLFRYPYEKLKVSADDGIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAK
LTRMGLLT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtggacccgggcggacaaacacggccagctggacctgctgctgcgggaccgc
tggatccgcgtggcggccgagctgagccgggagacgctggcgctgacggccgaggcggag
gctgcggggccgggggggccggggccggggaccgggggcggccgctgggactcctgctcc
ccgcccgccccggccggcctgaggaacggcctggccaacgggacggacccgggacccggg
ccggggagccgctacggctacggcagccccgggccggagctcgggggtcccgggggctgc
gacccccccggcccccccggcagcccgggcgggggctccgaggcgctgcggaaggtgcgg
gtcgtcaagcaggagtccggcgggctgggcatcagcatcaagggggggcgggagaaccgc
atgcccatcctcatctccaagatcttcccggggctggcggccgaccagagccgcgctctg
cgggtcggggacgccatcctgtccgtgaacgggaacgacctccgggaggcgacccacgac
atggcggtgcaggcgctcaagaaggccgggaaggaggtgacgttggaggtaaagtacatc
cgcgaggtgtcgccactcttcaagaagccatccctggtggcggacctgccgtgggacggc
gtgcgcccacagtcacccagcttcagtggcagcgaggactcggggtcacccaaacacagc
ggctccccctccacttccaaagacaggaaggtcatcagcctaaagatgtgcttcatcagc
aggaacctaaccatgccagatctagagaacaggctgttggagctccattccccagacggc
cagcacacggtggtgctgcgctgcaaagacgggcccaccgccaactcctggttcactgcc
atccacaccaacatcgccgccctcctgccgcaggccctggcacacatcaacgcctacctg
ggggcctcctctgcaggctctacacacccccacctcaagcacatcggctggttggctgaa
caggttcagctggaaggcgggcgacagcagtacaggccagtggtcatagcgctgacggag
aaggacatcctgttgtttgaatcggtgccatggagcagagaatcctggtccatgcccctg
ctcacacacccgctgctcgccaccagactcgttcactcaggaagcgcccgcagctctcct
tcccagggttccgatctcgtgtttgcaactcggaccggaacaggtcggggcattgaatcg
cacgttttccgagtggagactcactgggatctgtcttcgtggacgcgagcacttgtgcag
ggggcacacgctgccgccgagctcatcaaagaagtctccattggttgcacgttgaacaga
caggatgtacggctgacgctgcactacgaaaagggcttcactgtgacgagagaaccggcc
gatccaactgggggcgccgtgctctttagatacccctacgagaagctcaaagtgtctgct
gacgatggaatacgcaacctttaccttgactttggtggtccagagggagagatggtcttc
gacctccactccggtccaaagcctgtggtatttgtcctccactccttcctgtcggccaag
ctcactcgcatggggcttctgacgtga
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