Cololabis saira (Pacific saury): 133443955
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Entry
133443955 CDS
T09849
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133443955 (zgc:173742)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
133443955 (zgc:173742)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Topoisomerases
133443955 (zgc:173742)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
133443955
NCBI-ProteinID:
XP_061577304
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All DBs
Position
5:25061604..25109393
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AA seq
737 aa
AA seq
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MGREKDGKGDMKQKASRLKRLSDGESAAAGGETNKNSMKPTKSTEKTDNGKSQKKAKKPK
TEILEPATISSDFLKEEPQDDDFAAKKKGLKRKRIKDENMDATVSPTLKKTNKQLGDDGS
EEVQKKPKKTVKVVKKEEDDHLVTKKVKRTKEEIEEAKQLKMIKKEEEEQNRWRWWEEEK
YEDGVKWKFLEHTGPSFPPEYQPLPDNVNFYYNGNKMKLGLAAEEVAVFFAQMLDHEYTT
KKVFRENFFKDWRKEMTPEERSLIGDLDKCDFGEIHAMHKAKVEARKNMTKEERQAIKEA
NQKIVDEYGYCMLDHHKERIGNFKIEPPGLFRGRGEHPKQGMLKKRIQPEDVIINCSKES
RIPAPPAGHRWKEIRHDNTVTWLASWTENIQGAIKYIMLNANSKLKGEKDWEKYEIARKL
KLCVEDIRYQYNQDLKSKQMVTRQRAVAMYFIDKLALRAGNEKEEGESADTVGCCSLRVE
HITLHEQLDGKECVVEFDFLGKDSIRYYNKVPVIRKVFKSLNLFLENKDPGDELFDRLNT
SLLNKHLSSLMPGLTAKVFRTYNASITLQQQLKELTNKSDNEPEKLLSYNRANRAVAILC
NHQRAPPKTFDQSMANLQTKIETRKEKLALAKTELKQAKKEAKTKGNSDPKAQTLVERKK
AAVKRCEEQLLKMEVQATDREENKQIALGTSKLNYLDPRITVAWCKNMGVPIEKVYNKSQ
RDKFAWAIDMTEADFEF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagagaaggacggtaaaggagacatgaagcagaaagccagcagactgaagagg
ctgagtgacggtgagagtgcagctgccggcggagagactaacaagaacagcatgaagcca
actaagtcgacagagaagaccgataatggaaagtctcaaaagaaggcaaagaagcctaaa
actgagatcctggagccagccaccatttccagtgactttttgaaagaagagcctcaggat
gatgacttcgctgcaaagaagaaagggctgaagaggaaaagaattaaagatgaaaacatg
gacgccactgtttcacctaccttaaagaaaacaaataagcagcttggtgatgatggaagt
gaagaagttcaaaaaaagccaaagaagacagtaaaggtcgtaaagaaagaggaggacgac
catttggtaacaaaaaaagtgaaaaggacaaaggaggagattgaggaagcaaaacagctg
aagatgattaagaaggaggaggaggagcagaatcgctggagatggtgggaggaggagaag
tatgaagatggggtgaaatggaagttcttggaacacactggcccgtccttccctcctgag
taccagcctctacccgacaatgttaacttctactataatggcaataagatgaagctgggc
ctggcagcagaggaggtggctgttttctttgcacagatgttggaccacgagtacaccaca
aagaaggtgttccgggagaacttctttaaagactggaggaaggaaatgactcctgaggag
aggtcactgattggagaccttgacaagtgtgactttggagaaatccatgctatgcataaa
gcgaaggtggaggcgaggaaaaacatgaccaaggaggagagacaggctataaaagaggcc
aatcagaaaatcgtggatgaatatggctactgtatgctggaccaccacaaagaacgtatt
ggtaactttaagattgagcctccaggtcttttccgagggagaggcgagcatccaaaacag
ggaatgctgaagaaaaggatccagcctgaggatgtcattatcaactgcagcaaagaatcc
cgtatcccggcaccacctgctggtcaccgttggaaggaaatacggcatgacaacactgtg
acttggctagccagctggacggagaacatccaaggcgccattaaatacatcatgctcaat
gcaaactcaaagctcaagggagagaaagattgggagaaatatgagattgctcggaagctg
aagttatgtgtggaagacatccgttaccagtacaaccaggatctcaaatccaaacagatg
gtcacacgacagagagctgtggccatgtacttcatagacaagctggcactgagggctggt
aacgagaaagaggagggagaatcggctgacacagttggttgctgctcgctccgcgtggag
cacatcaccctacatgagcagctggatggtaaagagtgcgtggtggaatttgacttcctg
ggtaaagactcaattcgctactacaacaaagtccccgtcatcaggaaggtttttaagagt
cttaacctttttctggagaacaaggatccaggagatgaactctttgaccgtctaaataca
agccttttgaacaaacatctgagctctctaatgcctggtctgactgcaaaggtattcagg
acatataacgcctccattaccctgcaacagcagctgaaagagctcacaaacaaatctgac
aatgagccagagaagctgctgtcttacaaccgtgcgaacagagcagttgctattctgtgc
aaccaccagcgggcgccgccaaagacctttgatcaatccatggctaaccttcagaccaag
attgaaacaagaaaagaaaagctggctctagctaagacggagctgaaacaggctaagaag
gaggccaagaccaaagggaactcggaccccaaagctcaaacactggtggagaggaagaag
gcagcagtaaagcgctgtgaggagcagctgctgaagatggaggtccaggcaactgacaga
gaggagaacaaacagattgctctgggtacctcaaaactcaactatctggacccacgtatt
actgtggcctggtgtaagaacatgggggtgcccatagaaaaagtctacaataaatcccaa
cgggataagtttgcctgggccatcgacatgacggaggcggactttgagttctaa
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