Cololabis saira (Pacific saury): 133444019
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Entry
133444019 CDS
T09849
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133444019 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133444019 (abcc8)
Transporters [BR:
csai02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
133444019 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
nSTAND1
Sigma54_activat
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
133444019
NCBI-ProteinID:
XP_061577419
LinkDB
All DBs
Position
5:27713403..27784487
Genome browser
AA seq
1618 aa
AA seq
DB search
MISRYKPSPGSTMSLAFCGNENNSSAYNVDGGVLNNGCFLDALNVVPHVFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWLLTFVLLFILVCEIAEGIVSDGFSQSLHLHLYM
PAALAFMAGITSIVYYHNIETSNFPKLLLALLIYWVLAFIMKIVKFAKYTEHGIGPGQLR
YCITGLLMLLYGLLLAVEINVILGRRYMCFANPTEVKPPEDLQDLGVRFLQPFVNLLSKA
TYWWMNTFITSAHRRPIDLKVIGKLPIAMRALTNYIKLRKEFEEQKRPQGIAPQGPKWIW
QALRKAFGRPLILSITFRFLADLLGFAGPLCISGIVHHISKDNRTIQQPTKLLGIYFISS
KEFLENAYVLAVLLFFTLLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLSTSNMS
MGELTVAQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIA
VLAPVQYFVATKLSQTQKSTLEYSSERLKKTNELLRGIKLLKLYAWEQIFCDSVEETRGK
ELTSLQAFALYTSISIFMNAAIPIAAVLTTFVVHVHISEDADLSPAVAFASLSLFHILVT
PLFLLSSVVRSTVKALVSVQKLSEFFSSDEIGDEYEPRATLSSGCSNHNQNRYQAVSSSK
TLPTSTSSSFFSRYLQPLKVVNRKRPPRDDWNNYSSQGDPEGDGPSQDVDRDICIKITSG
YFTWTDGAPTLSNVDIKVPFGKLTMIVGQVGCGKSSLLLAALGEMQRISGTVTWNSLPNL
ESEADESPTDREAPSDGDIRKRCAVAYASQKPWLLNTSVVENITFEMPMIKSRYKAVIEA
CSLQPDIDILQQGDQTEIGERGVILSGGQKQRISVARALYQQTNVVFLDDPFSALDIHLS
DHLMQDGILKLLREEKRTVVLVTHKLQYLLHADWIIAMKDGTIQTEGSLKDIQNSEPELF
EQWKTLMHREGQEFQTETVEASMTDMERKNLRRAMYSREAARTEEDEEEESVESEDDDNF
SQVMRQRATIPWRSCGTYLSSAGFLLLSLFLLSQLLKHSLMVAIDYWLAHWTSQVIAAKL
DASAHNCTLVQDCGFSHSWYLSVFSVLCCLGIVLCLATSVAVEWTGLKVAKELHHNLLNK
IVLAPMRLFETTPLGSILNRFSTDTNTIDQHIPTTLECLSRSTLLCVCALGVISYVTPVF
LFALLPLAVACYFIQKYFRMASRDLQHLEDGTQLPLLSHFSETVEGITTIRALRYEPRFR
QRLLQFTDANNIASLFLTAANRWLEVRMEYIGACVVLVAAVASITNSVYNQLSPGLVGLG
LTYALMVSNYMNWMVRNLADMEVQLGSVKRINGLLKTEPENYEGLLTVSQVPDGWPRHGE
IKIQNLSVRYDPTLKPVLKNVNAHISPSQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIV
IDNIDIAKLPLQTLRSRLSIILQDPFLFSGTIRFNLDPEMKATDEMLWEALEIAQLKPVV
KTLPGGLDAMVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATESILQKVV
MTAFADRTVVTIAHRVHTILNADLVIVMKRGIILEYDGPQALLDKEDSVFASFVRADK
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacggtataaaccgagtcccggttccaccatgtccttggcgttctgtgggaac
gagaataactcgtcagcctacaacgtggacgggggcgttctgaacaacggctgtttcctt
gatgcgctcaacgtggtcccacatgtttttctgctcttcatcacctttcccatcctcttc
attggttggggcagtcagagttcaaaagtccacattcaccacagcacctggcttcacttc
cctggacacaacctgcgctggctcctcaccttcgtcctgctcttcatcctcgtctgtgag
attgcagaaggcatcgtctctgatgggttcagccagtccctccatcttcatctatacatg
cctgcagctctggctttcatggctggcatcacatctatcgtctactaccataacatcgag
acctccaatttccccaaattactactagccctgctgatctactgggtactggccttcatc
atgaagattgtcaagtttgccaagtacacggagcacggcatcggccccggccagcttcgc
tactgcatcacaggactgctgatgctgctgtacggacttctgctggctgtggagatcaac
gtcatcctgggcaggcgctacatgtgtttcgccaatccaacagaggtgaagccccctgaa
gatctccaggacctcggtgttcgtttcctgcagcctttcgtcaacttgttgtccaaagca
acttactggtggatgaacaccttcatcacctccgctcacagacggcccatcgacctgaag
gtcatcggcaaactgcccattgccatgagagcgctgacaaactacatcaagcttcgcaag
gagtttgaggagcagaagaggcctcagggcatcgcaccccaaggtccgaagtggatctgg
caggccctgaggaaagcatttggcagacctctcatcctgagcatcacattccgcttcctg
gcggacctgctgggcttcgccggcccgctctgcatctctggcatcgtgcaccacatcagc
aaagacaatcgtaccattcagcaaccgacgaagcttctcggcatctatttcatttcctcc
aaggagttccttgagaatgcatatgtactggcggtgctactcttcttcaccctgctcctg
cagaggaccttcctccaggcctcctactatgtggccattgaaaccggcatcaacctgcgt
ggggccatacagacaaagatctacaacaagatcatgcgcctgagcacgtccaacatgtcc
atgggagagctgacggtggctcagatctgtaacctggttgccatagataccaaccagctc
atgtggttcttcttcctttgtcccaatctgtgggccatgccagtgcagataatcgtggga
gtgatcctgctctactacctcttgggaatcagtgccttgattggtgcgactgtcattgct
gtgttagcacctgtgcaatactttgtggccacgaagctgtcccaaacacaaaagagcact
ctggaatactccagcgagcgtctaaagaagaccaatgagctcctgcgaggcatcaagctg
ctgaaactgtacgcctgggagcagatcttctgtgacagtgtggaggaaaccaggggcaag
gagctcaccagcctgcaggcgttcgctctttatacgtccatatccattttcatgaatgca
gcaatccctattgcagcagtgctgacaacattcgtggttcacgtccacatctctgaggat
gctgatctgtctccagctgtggctttcgcctctctgtctctctttcacatcctggtcacc
cccctcttcctcctgtccagcgtggtgcgctccactgtcaaggctcttgtgagtgttcag
aagctcagtgagttcttctcaagcgacgagattggagatgagtacgagcccagagcaaca
ttatcgtctggctgcagcaatcacaaccaaaataggtaccaggctgtgtcatcctctaaa
actctccctacgtcgacttcctcctcctttttctcccgttacctccagcctttgaaggtg
gtgaaccggaagcgccctccgagggacgactggaacaactacagctctcagggggacccg
gagggtgacgggccctcccaagatgtggaccgggacatctgtatcaagataactagcggt
tatttcacctggacggatggagcacctacgctttccaatgtggacatcaaggttcctttt
ggtaagctgactatgattgtgggccaggtgggctgcgggaagtcgtcgctgctgctggcg
gcactgggagagatgcagagaatctcgggaacggtcacctggaacagcttgccaaacctt
gagtctgaggcagatgaaagtcccacagacagagaagcaccaagtgacggagacatcagg
aagagatgcgccgtggcctacgcttcccagaagccctggctgttaaacaccagcgtggtg
gagaacatcacctttgagatgcccatgattaaatcaagatacaaagctgtcatcgaagcc
tgctcccttcagcccgacatcgacatccttcagcagggggatcagacagaaatcggggaa
cgcggtgtcattctttcaggaggacaaaaacaacgaattagtgtggccagagcactgtac
cagcagaccaatgtggtttttctggatgaccccttttctgccttagacatccacctgagt
gaccatctgatgcaggacggcatcctgaagctgctgagggaggagaagaggacggtggtg
ttggtcacacataagcttcagtatctgctccacgcagactggattattgccatgaaggat
gggactatccagactgaagggagtctgaaggacatccagaactctgaacctgaactcttt
gaacagtggaaaaccttgatgcacagagagggccaggagtttcagacggagacggttgag
gcaagtatgactgatatggagaggaagaacctgcgaagggccatgtactccagggaggcg
gcgaggacggaggaggacgaggaagaggagtccgtggaaagcgaagacgatgacaacttc
tcccaggtgatgcgtcagcgggccaccatcccctggcgctcctgcggtacctacctgtcc
tctgccgggttcctgctgctcagcctgttcctcctgtcgcagctcctcaaacactcgctc
atggtcgccatcgactactggctggcacactggacctcacaggtcatcgcggccaagctg
gacgcctcggcccacaactgcaccctggttcaggactgcggcttcagccactcgtggtat
ctgtccgtgttcagcgtgctctgctgtctgggcatcgtcctctgtctcgccacctccgtg
gcggtggagtggaccggcctcaaagtggccaaggagctccaccacaacctgctcaacaag
atcgtgctggctccgatgaggctgtttgagacgactccgctcggcagcatcctcaacagg
ttttccacagacaccaacaccatcgaccagcacatccccaccacgctggagtgcctctcc
cgctccaccctgctgtgcgtctgcgccctgggcgtcatctcctacgtgacgcccgtcttc
ctcttcgctctccttcccctggccgtcgcctgctacttcatacagaaatacttccgcatg
gcttccagggacctgcagcatttggaggacggcacccagcttcctttactctcgcacttc
tctgagacggtggagggaatcaccaccattagagccctcaggtacgagcccaggttcagg
cagaggcttctgcagttcaccgatgccaacaacatcgcctcgctcttcctcaccgcggcc
aaccgttggctggaggtccgcatggagtacattggagcttgtgtggtgttggtggcagct
gtggcctccatcaccaactccgtctacaaccagctgtctcctggtctggtggggctcggc
ctgacgtacgcgctcatggtgtccaactacatgaactggatggtgcgtaacttggcagac
atggaagtgcagctcggctcagtcaagaggattaatgggctgctcaagaccgagccggag
aattacgagggactcctcactgtgtctcaggtgcccgacggctggccccggcacggagag
ataaagatccagaacctgagcgttcgttacgaccccacactgaagcccgtgctcaaaaat
gtcaacgcacacattagtcctagtcagaaggtggggatctgtggcaggactggcagtggc
aaatcatctttctccttggctttcttccgcatggtggacatgtttgaggggaggattgtg
attgacaacattgacatcgccaagctgccgctgcagaccctgaggtctcgcctgtccatc
atcctccaggaccccttcctgttcagtggaaccatccggttcaacctggacccagagatg
aaggccacagacgagatgctgtgggaagctctggagatcgctcagctgaagcctgtcgtt
aaaaccctgccaggaggtctagatgccatggtgacggagggaggggagaacttcagccag
gggcagcgacagctgttctgcctggccagagccttcgtgaggaagagcagcatcctcatc
atggacgaggcaacggcctccatcgacatggcaacggagagcatcctgcagaaagtggtg
atgacagcttttgctgaccgtacagtcgtaactatagcgcatcgcgtccacaccatcctg
aatgccgacctggtgattgtgatgaagcgggggatcatcctggagtacgacggaccccag
gccctgctggacaaggaggacagcgtcttcgcctccttcgtacgagcagacaagtag
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integrated database retrieval system
