Cololabis saira (Pacific saury): 133444036
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Entry
133444036 CDS
T09849
Symbol
si:dkeyp-19e1.3
Name
(RefSeq) USP6 N-terminal-like protein
KO
K20133
USP6 N-terminal-like protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133444036 (si:dkeyp-19e1.3)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133444036 (si:dkeyp-19e1.3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
133444036
NCBI-ProteinID:
XP_061577447
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All DBs
Position
5:28410908..28434711
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AA seq
829 aa
AA seq
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MKKDIDTLIAEERAEIISKYDKGRQEGVKIDPWEDADYTIYKVTDRFGFLHEKELPTPTA
LEEKHKQQELERVEKWLKMVKNWAKYRNHEKLVKRVYKGIPLQLRGQAWALLLDIEKMKQ
DNEGKYEKMKQQARSFSTEIKQIDLDVNRTFRNHIMFMDRFGVKQQALFHVLAAYSVYNT
EVSYCQGMSQIAAILLMYLNEEDAFWALSQLLTHSTHSMHGFFIPGFPKLQRFQTHHDLI
LSKMVPKLKKHLDKEQMTTGIYSTKWFLQCFIDRTPFTLTLRLWDIYIMEGEKILTAMAY
TILKLHRKRLQKLPLEDLREFFQEQLAASFCLPDDVVVEQLQAAMSELRSKKLDQPPPAK
SDELPRKPLGQERPILLLPLQPDSPLEVKIGQADREPSTDTQQTDGHTVHHTACSAEPSD
SKGFPEANAPSLPSADPAVNNAQATPSSLRPCRVAPEPPKASKPSNGVGVVTDMKESFAE
VCQNETKHENKKKDNETQEEPVEWPPPYEPPDLSAFTMQTEEEIMDLPDLPPPPLFYPEE
GDQRSRESESPCGGAGTPAPSTSPPSASLLVPQMKPSPKPHPKPTTSLDLPQKKTPPSKP
SPHRAFGGLSSSPPRLPPSKPTKPTKFPVSLHVPASMGDRRPSNTSQYDNLSEADDDDRL
VERLLSSTPEEIPSGHRILPYHVDRDYDPALYPVPPPPVFIPPSPSPIPPAMCALPSLPQ
EPEYEVGVSWVEDSVLPPPPASFADKLVPFPCTSAVCPDTNRSMSPVYSKPFSRGPRDHS
AFPAPLLYTGSSPGHSRSSGQSPVHLDQRSPNFSRTPPAGQQLPKSVTF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggatatagacacactgatagcagaggagcgggctgaaatcatctctaaatat
gacaaggggaggcaagaaggtgtcaaaattgacccgtgggaagatgctgactacactatc
tataaagtcactgaccgcttcggcttccttcatgagaaagagctgccaacacccactgca
ctggaagagaagcataagcagcaagagttggagcgagtggagaaatggctgaagatggtg
aagaattgggccaagtacaggaaccatgaaaagttggtgaagcgtgtatataaaggaatt
cctctgcagctgagaggccaggcttgggctttacttttggatatagaaaaaatgaaacaa
gataatgaaggaaaatatgagaaaatgaagcagcaggctcgtagcttttccacagagatc
aagcagatagacttggatgtgaacaggaccttcaggaaccacatcatgttcatggaccgc
tttggagtgaagcagcaagcactgtttcatgtactcgcggcttactccgtctacaatacg
gaggtgagctactgtcagggaatgagtcagatcgctgctatcttgcttatgtacctcaat
gaggaagatgccttctgggctttatcccagctcctcacccacagcacccattccatgcac
ggattcttcattccgggatttcccaagctgcagcgcttccagacacaccatgacctcatc
ctctccaaaatggtgcccaagctgaagaaacacctggacaaggagcagatgacgacaggg
atttactccaccaaatggtttctccagtgcttcattgacaggacccctttcacccttacc
ctccgtttatgggacatctacataatggaaggagagaagatactaactgctatggcgtat
acaatcctcaagctacacagaaagcgtctgcagaagcttccgctggaggatttgagggaa
tttttccaggagcagctggctgcttctttctgcctccctgatgatgtggtggttgaacag
ttacaggctgcaatgtcggagctgcgcagtaaaaagctggaccagcctcctccagcaaag
tcagatgagctgccaaggaagcctttgggtcaagagagaccgattctcctactcccgctg
cagccagactctcctctggaggtcaaaataggtcaggccgacagagagcccagcacggac
acgcagcagacagatggccacactgtacatcacactgcctgttctgcagaacccagtgat
tcaaaaggctttcctgaggcaaatgcaccttcattgccttcagcagacccggctgtcaac
aacgcacaggcaacaccttcctcccttaggccttgtagagtagctccagaaccaccaaag
gcaagcaaaccatcaaatggggtaggtgtggtcacagatatgaaggagtcttttgcagag
gtttgccaaaatgagactaaacatgaaaacaagaaaaaagacaatgagacgcaggaggaa
cctgtggagtggccgccaccctatgagccccccgatttgtctgcttttaccatgcagact
gaggaggaaatcatggaccttccagacctacctcccccacctctcttttaccctgaagaa
ggtgaccaaaggtctcgagagagtgaatccccctgtgggggggctgggacccctgcaccc
tctacttcccctccatcagcctccctattggtccctcaaatgaagccgtctcctaaacca
catccaaaaccaactacatctcttgatctcccacagaaaaagactcctccctcaaaacct
tcccctcaccgtgccttcggagggttatcctcttcccctcccagacttcctccatcaaag
ccaacaaagccaacaaagttccccgtttctctccacgttcctgcgtccatgggagacaga
cggccttccaacacctcccagtatgataacctttcggaggctgatgacgacgatcggttg
gtggagagacttctatcctccaccccggaggaaattcccagcgggcacaggatcttaccc
taccacgttgacagagactatgacccagctctctatccggtacccccacctcctgtcttc
atccctccttctccatcacctattcctcccgcaatgtgtgccctacccagtttgccccaa
gagccagagtatgaagtgggggttagctgggtggaggattccgtccttccccctcctcca
gccagttttgctgacaaactcgttccatttccgtgtacctctgccgtttgtccagacaca
aacagatccatgtcacctgtctattccaagcctttctccagaggccccagggatcattct
gctttcccagcacctttgttgtatactgggtcttctccaggtcactccaggtcctcagga
cagtcaccggtgcacttggatcagcgcagcccaaactttagtaggacgcctcctgcagga
cagcagctgcccaaatcagtgactttttga
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