Cololabis saira (Pacific saury): 133444051
Help
Entry
133444051 CDS
T09849
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133444051 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133444051 (lrrc4ca)
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
NGL family
133444051 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
DUF6821
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
133444051
NCBI-ProteinID:
XP_061577483
LinkDB
All DBs
Position
5:30037109..30131081
Genome browser
AA seq
644 aa
AA seq
DB search
MFNKMTSTQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTIIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHSEVLTTTIQQKVGP
TPSVGLWESVSPTSTTTTTVRTPHSTRATDKTYTIPVTEDSLNGLDEVMKTTKIIIGCFV
AITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGQGLEGHLTLPPLEHE
HLNHYSTYKTAYNHASTINSIHSSVHEPLLIRASSKDNVQETQI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagatgacgtccactcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttatttgtgttactcctggccctccagctgctggtggtggca
ggactggtccgtgctcagacttgtccttctgtttgctcctgtagcaaccagttcagcaaa
gtcatctgtacccgcagaggactgcgagatgttcctgacggaatttctaccaacacacgc
tatctgaatttgcaagaaaatcttatccaggtcattaaagtggacagcttcaaacatcta
agacatttagagattctgcagctgagcaaaaaccacatacgtaaaattgaacttggggcc
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcaccaccatt
ccaaatggggcatttgagtacctatccaaactaaaggagctttggcttaggaataaccca
atagagagcattccctcttatgcttttaatagagttccctcgttacggaggttggacctt
ggggaactcaaacgtctctcttacatatcagagggggcctttgaagggctgagcaatctg
cgctacttaaatttgggaatgtgcaatctcaaggaaattcccaatctcattcctcttgta
aagctggatgaacttgagatgtctggaaatcagctaactattatccggcctggctcattt
aaggggcttattcacttgcagaagctatggatgatgcatgctcagattcagaccatagaa
aggaactcctttgatgacctgcagtcactcgtggagcttaatctagcccacaataacctt
acccttttgccccatgatctgttcactcctctgcatcacctggagagggtacacttacac
cacaatccatggaattgcaactgtgacatcctctggctaagctggtggcttaaagagatg
gtgccagcaaacaccagctgctgtgcccgctgcagctcacctacccaccataagggacga
tacattggcgagttggaccagaattactttcactgttatgctcctgttattgtggagccc
cctgcagacctaaatgtgacagagggaagtgctgcagagttgaaatgcagagccagctcg
ttgacctcagtaagctggattacgcccaatggttccatcatgacacacggggcatacaag
gtcagaatctctgtactaaatgatggtacactgaacttcaccaatgttaccatgcaggac
acaggcacgtatacatgtatggtcagtaattctgcgggtaacacaacagcatctgccacg
ctcaatgtgtcctctacagagaacagcagtttcagctacttcactacagtgacggtggag
acaatagaaacaccacacagtgaagtcttgacaactactattcaacagaaggtgggtccc
acaccatcagttggtctatgggaatctgtttcacccacctctacaacaaccactacagtc
cgaaccccacactccacccgtgccacagacaagacctacacgatcccagtcacggaggat
tcactgaatggcttggatgaggtaatgaaaacgaccaagatcatcattggctgctttgtt
gcaatcacactcatggcagctgtcatgctcataatcttctacaaaatgcgcaaacagcac
caccagcagaatcaccatgcacctacacgcaccattgagatcattaatgtggatgaagac
tgtgtcactgggggccaaggcttggagggtcacctgactctcccgcctcttgagcatgag
cacctcaaccactacagcacctacaagactgcgtacaaccatgcctctactatcaattcc
atacacagctcagtgcacgaacctttgttaatccgggccagctcaaaagacaatgtacaa
gagacccaaatctaa
DBGET
integrated database retrieval system
