Cololabis saira (Pacific saury): 133444062
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Entry
133444062 CDS
T09849
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133444062 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133444062 (fanci)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
133444062 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
SPO22
Motif
Other DBs
NCBI-GeneID:
133444062
NCBI-ProteinID:
XP_061577508
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Position
5:complement(30955816..30968117)
Genome browser
AA seq
1323 aa
AA seq
DB search
MRAEIDKIVSLSDADNTASLQKYLSSLTNEQLFSVITNSALKAKTVRPVIKGILKGSSTN
TSEGSNRRLLLYQHCIPLCESGDLQAEVAAEIIGLLMLETHTLSGPSLAQLASLFVDAIK
VGKMGNGKSLELFPTVLTALAACESLSYGKGELNGEEFKKQLINSLCSSRWDPHCVIHLT
TMFRDVPLSSEELQFLVEKVVRMFAKLDLQEIPPLVYQLLLLSAKGCKKQVLDGIINYFK
GQDICQEEEQRHGESLDLEVQSIPQDQLRHVEGTVILHIVFAIRLDHELGREFLKSLKTA
YGDLCPFSVALLLSVTRIQRYEEQVFELLKGVVIKSFKEEQLQQGSKFLLDLLPKHCGVA
QMTLDTIKNSVFGWDHVTEGLVQLGFFLMDTFGPKPGPFGKAAEGPVSVARTPAQQACKL
GGQVLLQSFKVHESVRGEILEQVLNRLITKTASPVNHYLDLFSDIVASAPMILLESSSKL
TETFDHLSYLPLTTVQGLLKAVQPLLKVSMSLKDALILVLRKAMFSSQLDGRKSAVTGFL
LLLKNFKVLGSLASSQCSQAISSSQVQVDVHCRYNSAANEAFCLEILSSLRRCLGQQADV
RLMLYEGFYDVLRRNSQLASSIMQTLLSQLRRYYEPEQDLLPPVKLEPCITAHGDQVFLQ
EPLAHLVSCTVNCLLWLKNMRQSASCNDSDDDEEEEEGYQSDLQTILQSMTRRMIKCELE
DFELDKSAEFSMGSSVGVKNNIYAVLVMGVYEVLMEYNFIKANYNKSNFEDLLELFSRSH
KLSEILKEKSGKGRVSSHKTPRSLLSMGFVSTLITVLFRDNSQSREEALSVLRSSGEFVR
YALSVVVQKIQQLEETGHTDGPDGQNSDKTFRFLCDMTSVLMWRYTNIPSVVEEAGKKEK
RSSLSQLCLEGILKIFTTCQQRYPDKMPQLLSAMEIAENDAEQDDVTEMNYFYIRQFQRA
LFTLLSGGEEEFNSKEAQLLVSILSVLSRQLNPSSKQFTQMITWTVKICKETSFEDTAFS
KGLLSLLFSLHILYKSPVSLLLELCQDIHSQLGDIDQDVEVEKQSHFAIVNMKTATTAAL
LVLSQVGRVLDEVDWLIARKKSQTTSDKSGSGEATQTAGQQDPVEKAVTLQLGTLLTALN
ELVQTALLPGTCTITLLRELSRTYTILTTLVKYYIQVCPNQHPVLPSRFEKLVKLSGSHL
TPQCYTFITYAQSGESTGGGADDKKKKKKNDANTASSAKLLRETKVMPNLIFSIEQYEKF
LITLSKKSKVNLMQYMKLSTSRDFRINAATLDAALQEQDESQEAPNTQDTEETQEPKQKR
RKR
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgagggcagaaatagataaaatcgtgtctctgtcagacgcagacaacacggcttccctt
cagaagtacctgtcctccctgaccaatgagcagctcttttctgtcataactaatagcgca
ctaaaggccaagacggtccgtcctgtgatcaaaggcatcctaaaaggctcttcaactaat
acctctgaggggtcaaatcgcagacttctcctgtatcagcactgcatccctctatgtgag
tcaggggaccttcaggctgaggttgcagctgaaatcattggactgctgatgcttgagact
catacactttctggaccatctcttgcacaactggcatctctatttgttgatgctattaaa
gtggggaaaatgggaaatggaaaatccctggagttatttcctactgttctgacagccctt
gctgcgtgtgaatccttgtcatacggaaaaggggaacttaatggtgaggaattcaagaaa
cagctgataaacagcctctgctcgagcagatgggacccacactgtgttattcatttgaca
actatgttcagggatgtgcccttatcgtcggaggagctgcaatttctggtggagaaagta
gtgagaatgttcgccaaactggatctgcaggagatcccacccctggtttaccagctgctg
cttttatctgctaagggttgtaagaaacaggtcctggatggtatcatcaattattttaag
gggcaagacatttgccaagaagaagagcagagacatggagagagcttggatctagaggtt
caatctattccacaggaccagttaaggcatgtggaggggaccgtcatcctccacatagtc
tttgctatacgactggaccatgagctgggcagagaattcctaaaaagcctgaagacagcg
tatggagacttgtgtcctttcagtgttgccctgttgctctcagtgacacgtattcagcgt
tatgaagagcaggtgtttgaactcttaaaaggagtagtcatcaagagcttcaaggaggag
cagctgcagcaaggatcaaagttccttctggacctcttgcctaagcactgtggtgtggct
cagatgacactggacacaatcaagaacagtgtgtttgggtgggatcatgtcacagaggga
ttggtgcagctgggcttcttcctgatggacacatttggacccaaacctggaccgtttggt
aaagccgcagagggacctgttagcgttgcccgaaccccagctcagcaggcgtgtaagctg
ggaggacaggtgctcctacagagctttaaggtgcacgagtcagtcagaggcgagatattg
gagcaggtcttgaaccgtcttatcacaaagacggcttcacctgtcaatcattatttggac
ctgttctctgacattgtggcctctgctcccatgatcctcctggagtcttcctccaagctc
acggagacatttgaccacttgtcatacctgcctttgaccaccgttcagggtctgctgaaa
gctgtacagcccctactcaaagtcagtatgtctttgaaagatgctttaattctagttctt
cgcaaggccatgttttccagtcagctggatggcaggaagtctgcagtgaccggcttcttg
ttgttgctgaagaacttcaaagtgctgggcagcttggcctccagtcaatgtagtcaggca
atctcctccagtcaggtccaagttgatgttcattgtcgttacaactctgctgccaacgaa
gcgttctgtctggagatcctcagcagcctgcgtcgctgccttggccagcaggccgatgtg
cgcctcatgctctatgagggtttctatgatgttctacgtcgcaactctcaacttgccagc
tccatcatgcagactctcctctcacagctgaggcggtactacgagccagaacaggacctg
ctgcccccggtgaaactggagccatgcatcactgctcatggggaccaagtctttctccag
gagcccctggcacatcttgtgagctgcaccgtgaactgcctgctgtggctgaagaacatg
cgccagtcagccagctgcaatgacagcgatgatgatgaggaagaggaggagggatatcaa
tctgacctacagacaatcctccagagcatgacacggcgcatgatcaagtgtgaactggaa
gactttgagctggacaagtcagcagagttttcaatgggatcaagcgttggagtgaagaat
aacatctatgctgtacttgtgatgggcgtgtatgaggtcctaatggagtataacttcatc
aaagcaaactacaataaaagtaactttgaagaccttcttgagctgtttagccgatcccac
aaactgtctgagatcttgaaggagaaatctggaaagggtcgagtttcctcacacaagacc
cctcgcagtttactctctatgggcttcgtatcaacgctcattactgtgctcttcagggac
aacagtcaaagcagagaggaggccctctcagttctccgctccagtggagaatttgtgcgg
tacgcgctaagtgtagttgtacagaagatccaacagctggaggaaacgggacacacagat
ggtccagatggacagaattcagacaaaactttccgcttcctctgtgacatgacgagcgtg
ctgatgtggcgttacacaaacatccccagtgtggtggaggaggcggggaagaaagagaag
cgctccagcctgtcccagctttgtttggagggtatcctgaagatcttcacaacctgccag
cagcgatacccagacaagatgccccagctcctctctgctatggaaattgcagaaaatgat
gccgaacaagatgatgtaacagagatgaactatttttatatcagacagtttcagagggcg
ctgttcacactattaagtggaggtgaggaggagtttaacagcaaagaagctcagctgctg
gtcagtattttgagtgtactctcacgtcagctgaatccatcctccaagcagttcacacag
atgattacgtggactgtgaaaatctgcaaagagactagttttgaggacactgcgttctcc
aaagggttgctctctcttctcttcagcctgcacatcctttacaagagtcctgtgagcctt
ttgctggagctttgccaagacatccacagccagctgggagatattgaccaggatgtcgag
gtggaaaaacagtctcattttgctattgtcaacatgaaaactgctacaacagcagcatta
ctggtcctgtctcaagttggccgagtgctcgatgaggtggactggctcattgccagaaag
aaaagtcagacaacttctgataaatctggctctggtgaagccacccagactgcaggccaa
caagacccagttgagaaagcggtgacgctgcagctcgggactctcttgacggcgttaaat
gagctggtccagacagcccttctgccgggaacgtgcaccattacactgctgagggaactg
agtcgtacttacaccatcctcaccaccctggtcaaatactacatccaggtgtgtcccaat
cagcaccctgtcctgcctagtcgcttcgagaagctggtgaaactatctggctcccacctc
accccacagtgctacacgtttatcacatatgcacagagtggagaatccactggtggaggt
gcagatgacaagaagaaaaagaaaaagaatgatgcgaatactgcttcttctgcaaagctt
ctgcgtgagacaaaggtcatgcctaacctgatcttcagcatcgaacagtatgagaagttt
ctcatcacactctcaaagaaatcaaaggtcaatctcatgcaatacatgaagctgagcacc
tcaagagatttccgcatcaatgctgctactctggacgcagccctgcaggagcaggatgag
agtcaggaggccccaaacacgcaagacacggaggagacacaggaacccaagcagaagagg
agaaaacggtga
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integrated database retrieval system
