Cololabis saira (Pacific saury): 133444077
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Entry
133444077 CDS
T09849
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133444077 (ambra1b)
04137 Mitophagy - animal
133444077 (ambra1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133444077 (ambra1b)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133444077 (ambra1b)
Membrane trafficking [BR:
csai04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
133444077 (ambra1b)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
133444077 (ambra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
133444077
NCBI-ProteinID:
XP_061577541
LinkDB
All DBs
Position
5:complement(31424209..31452428)
Genome browser
AA seq
1382 aa
AA seq
DB search
MASHQRNSVRILSSRERGSQTFGSQRLLQLLVEEKVRWMKWQSQKVDLPDSPRSTFLLAF
SPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSDTE
RVRLVRFDPLGHNLLTAIVNPSNQQNEEDTEVPMDSVEMPHFRQRSFLPSQPVRRTPILH
NFLHILSSRSPGAQPGGEQARPLSENANNIGDSPSMPRAQYPSSEHGPPFPGCTHHLGMV
CLCSRCSVSRNPSLTTDSPSVTLADTRVSSDTSTLSTASTFSSARTEPRQPSERPSAFTS
VYYSASTSLNPIIPSRIEPHSTSRLGPDWTRNLLSMREGGVGPGMLPPRTSSSSSVSLLS
VLRQQDGSSHSPVYTSATEGRGFPQQGDSGSRDAAGTSSGHHPFWDGSRSNTASFRNVLQ
CNLSRYFLEIDRIDIDPSLGVNIPDGNQEPSQELLNNNMDPDRPGPSSSSSTTSPTIIHY
QPPLPPPPAFHNLENNVPPPASRGHLNRCRACHNLLTFNHDSQRWERTNQTSSTSASTPE
ASSSSFSFPSSSSQPPWQPEESRRTLEVQTQERRVPPEPSEQPPPPPGGAAGTVAFPIAS
PPSQPGEQTVGLVYNQDTAQWERVYRQATTSRPADPPEALSQEMPVDPPDEDSLRRRLLE
SSLLSLSRYDMSGSREHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRA
MSTSSDSPTSNPASSMDNSDVDFEELDDNGDRARHRTPRNARMSAPSLGRFVPRRFLLPE
YLPYAGIFHERGQPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLP
EISNASVNVLVPNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAIYSLASHNLGE
MLYTKRFGPNAISVSLSPMGCYVMVGLASRRILLHPTTDHMVAQVFRLQQPHGGETSIRM
VFNVVYPMAPDQRRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSEGESPGESSS
ETLFSVNNSGSSRARGSERPGPNRSGWRLDRDMGLMNAIGLQPRNPTPSVTSQGTQTPIV
QLQNAETQTERDLSEPSVSQPPLTVNPETPSTSRAAQAPPEASEGGRVQDLVLTDASTEV
NTVAAASAGQAESADFGSGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVS
HRIHRGSQTGAGASRPPLDPNSQPLLMTQPFPHQPPEAAGSSEQLAPMWGPQVLSGPRPS
GLSVAVDMDDVFDGGRAEDDSLPGPSSSLLLSSPSSSSSSSHSPLPGSGGGSNNYPGDPY
SR
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccatcagagaaactctgtccggattctgtccagccgggagcgaggatcccag
acattcggctcacagaggctcctgcagctgctggtggaggagaaggtccgctggatgaaa
tggcagagtcagaaagttgatctgccggacagccctcggtcaaccttcctgctggccttc
agccctgacaggaccttgatggcatccacacacgtcaaccacaacatttacataacagag
gtgaagactggaaagtgcctacattccttggtgggccaccggagaaccccttggtgcgtg
acctttcatcctaccattcctggcttggtggcctctgggtgccttgatggcgaagtccgt
atctgggacctgcacggtggcagtgagagttggtttacagagagcaatgtggccattgct
tccctggccttccatccaactgctcagcttctcctgatcgccaccaacaacgagctgcac
ttctgggactggagccgaccggagccctttgccgtggtcaaaacgggcagcgacacagag
cgagtgcggttggtgagatttgaccctctgggtcacaacctgctgacagcgatagtgaat
ccatccaatcagcagaatgaggaggacactgaagttcctatggacagcgttgagatgcct
cacttccgtcagcgctcattcctgccctctcagcccgtgcgccgcacccctatcctccac
aacttcctccacatcttgtcatctcgctccccaggtgctcagccgggaggtgagcaggca
aggcctcttagtgaaaatgcaaacaatattggagactctcccagcatgcctcgggcccag
taccccagctctgaacacggacccccttttcccggttgcacccaccaccttggcatggtt
tgcctttgcagtcgctgctccgtcagtcgtaacccttccctgactacagatagtccctct
gtgactctggccgataccagggtgtcgtccgacacttccactctttccacagcctccacc
ttttcttcagcacgtacagagccaaggcagccctcggagagaccctcagccttcacctcc
gtttactacagcgccagcacttctcttaatcccattatccccagtagaatagagccacac
tccacctcaaggctaggacctgactggactcgtaacctgctcagcatgagagaaggtggg
gtcggtccaggcatgctgcctccccggacatcctcctcttcctcagtcagccttctttca
gtgctccgtcagcaggacggctcgtctcactcccctgtttacacctctgccactgaagga
cgaggtttcccccagcagggagactctgggtcccgagatgctgcaggaacgagcagcggc
caccacccgttctgggacggctctcgcagcaacacggcctccttccgcaacgttctgcag
tgtaacctgagtcgctacttcctggagatcgaccgcattgacattgacccatcattaggt
gtcaacataccagatggaaaccaggagccaagccaagagctgctgaataacaacatggac
ccagacagaccaggaccatcttcatcttcctctactacttcccctaccatcatccactat
cagccgcctctccctccgccccctgccttccacaacttggagaacaatgttcctcctcca
gcatctcgaggccacttgaaccgctgccgggcgtgccacaacctgctgaccttcaaccac
gactcccagcgctgggagcgcacgaaccagacctcctccacctctgcctccacgccggag
gcctcctcttcttctttctccttcccttcatcttcatctcaacctccctggcagcccgag
gaaagtaggaggacactagaagttcaaacacaagagaggagggtccctcccgagcccagc
gagcagccgcctccccctccgggtggagcggcaggaacagtggccttccccatagcttca
ccccccagccagcccggggagcagacggtgggcttggtgtacaaccaagacacggcacag
tgggagcgagtgtaccggcaggccaccactagcagaccggcagatccaccagaggcctta
agccaagaaatgcctgttgaccccccagacgaggattctctaaggaggagactgttggaa
tcatctctgttatcattgtcacgctatgacatgtcaggatctagagagcacccaatttac
cctgacccagccagactttctccagcagcatactatgctcagaggatgatccagtatttg
tccagacgggacagcattcgtcagcgttcactgcgttaccaacagaaccgcttgagggcc
atgtctacttcctccgacagcccgaccagcaacccagccagctccatggacaacagtgat
gtggactttgaggagctcgatgataatggagacagagcgagacacaggacaccccgaaat
gccaggatgtctgcaccctcgctgggtcgttttgtccctcggcgtttcctgctgccagag
tacctcccctacgctggaatcttccacgaacgagggcagcctggtttggccacacattcc
tctgtcaacagagtgctagctggagcatccatcggagacggccagtctgcagttgccagc
aacatcgccaacacgacgtaccgtttgcagtggtgggacttcaccaagttcgacctgcct
gagatcagcaacgcgtcggtcaatgttctggtgccaaactgtaaaatctacaacgacgca
agctgtgacatctctgcagacggtcagctgctggcagtttttattcccagcagtcagcgg
ggttttccagatgagggcattctggctatttactctctagcttcacacaacttgggagag
atgctctacaccaaacgattcggtcctaatgccatctctgtcagcttgtctccgatgggc
tgctacgtcatggtgggcctggcctctcgcaggatcctgctgcatcccacaactgaccac
atggtggcgcaagtcttccgtctgcagcagccacatggaggagagacttccatcaggatg
gtgttcaatgttgtttaccccatggctccggaccagaggcgccatgtcagcatcaactcg
gcccgctggctgccagatcctgggatgggtctggcatacgggacaaacaagggagacctg
gtcatctgccgacctgtgttctataggagtgaaggcgagagtcccggggagtcgagcagc
gaaacattgttttctgttaataacagtggaagcagccgggctcgaggttctgagagacca
ggaccaaatcgctctggctggagactggacagagacatgggattgatgaacgcgattggt
ttacagccccgaaatcccaccccttctgtgacatcacaaggaacccagacgccaattgtc
cagctccagaacgctgagactcagacagagagagacctatcagagccaagtgtctcccag
ccgccactgactgtgaatcccgagactccttccacgagtcgagcagctcaggcgccgccg
gaggcgtctgagggcggcagagttcaggacctggtcctgacagacgcttccacggaggtt
aacactgttgcagcagcttccgcaggtcaagcggagtctgcggatttcggatctggcgaa
gacgccctggctcggatccgccggctgattgccgagggcggcatgacggcggtggtgcag
cgggagcagagcaccaccatggcctccatgggcggcttcgggaacaacatcatcgtcagc
caccgcatccaccgcggctcccagacgggcgccggggcctccaggccccccttggacccc
aactcacaacccctcctcatgacccagcccttcccccaccaaccccccgaggctgccggc
tcctcggagcagctcgcccccatgtggggcccccaggtgctgtccggcccccggccctcc
ggcctctcggtggccgtggacatggacgacgtgtttgacggggggcgagcagaagacgac
tccctgccgggcccctcctcctccctgctgttgtcttccccctcttcttcctcctcgtcc
tctcacagccccctccccggcagcggaggcggctcaaacaattaccccggcgacccgtac
agcaggtag
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integrated database retrieval system
