Cololabis saira (Pacific saury): 133444083
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Entry
133444083 CDS
T09849
Symbol
lrp5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04150
mTOR signaling pathway
csai04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133444083 (lrp5)
04150 mTOR signaling pathway
133444083 (lrp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133444083 (lrp5)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
133444083 (lrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
133444083
NCBI-ProteinID:
XP_061577555
LinkDB
All DBs
Position
5:complement(32050112..32103288)
Genome browser
AA seq
1630 aa
AA seq
DB search
MDAVLLWSCLLSAVCGSPLLLFANRRDVRLVDADGLRGESAIVVGDLEDATALDFLYAEG
LIFWTDVSEEAIKQTHWNQSSNSLREALGTGQTVVVSGLDSPDGLACDWLGKKLYWTDSE
TNRIEVANLDGTSRKVLFWMDLDQPRAIALNPAQRYMYWTDWGEEPRIERAGMDGSSRKV
IVNVDIHWPNGLTIDLVEQKLYWADAKLSFIHRANLDGSSREAVVEGTLTHPFALTLSKE
TLYWTDWQTRSIHACNKHSGDKTREILSGIFSPMDIQVLEEYRQPDIQTPCTNDNGGCSH
LCLLSPVQPFYSCACPTGVQLKPDGRTCKPGAEQVLLLARRTDLRRISLDLPDFTDIVLQ
VDDIRHAIAIDYDPIEGYVYWTDDEVRAIRRSRIDGSNATVLVTTEINHPDGIAVDWVAR
NLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVVDPVNGFMYWTDWGERPKIERAN
LDGTDRLVLLNTSLGWPNGLALDYTAGKLYWGDAKTDKIEVINVDGSDRRTLLEDKLPHI
FGFTLLGDYIYWTDWQRRSIERVHKTTAVREIIIDQLPDLMGLKATKVTETHGTNGCAGS
NGGCSHLCFWRQHAVSCSCPMGMELLSDLQTCVVPEAFLLFNNRDSIRSISLGTNSNDVA
IPLTGVKEASSLDFDVSERRIYWTDIQAKTISRAYMNGSSVEHVIEFGLDYPESIAVDWM
GHNIYWADTGPKRIEVARLDGQHRQVLVCKDLDNPRSLALDPANGYMYWTEWGGRPRIAR
AYMDGSTITTIVDKVGRTNGLTIDYADQRLYWTDMDTCMIESTNMQGLQREIIVDDLPHP
FGLTQYRDFIYWTDFNLRSIERADKRSGLNRTVVLQGQLELMLDILVFHSSRQDGTNGCS
HNNGNCAHLCLASPAGAQCRCASHYTLNPDGRNCSSPSSFLLFSQKASISRMVLGEQSPD
VILPIHVLRNVRALSYDPLDRLIYWLDGRQNIRRARDDGTTTSMIMSSSAQLVDNQLHDL
SLDSYSRHIYWTCETTNTINIQRMDGSLVGVVLKDDTDKPRAIVVNAERGYMYFTTVQER
SAKIEGCSLDGTERESLFATGLIRPVALTLDNKLGKLFWVDADLKRIESSDLTGANRIVL
QDSNILQPMGLAILGDHLYWIDRQQQMIERVDKLTGDGRSRVQGRISYLTAIHAVEEMDP
EEFASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQDLLHCGEPPTCSTEQFTCSTG
EIDCIPMAWRCDGFPECDDGSDEENCPVCSAFQFQCDEGTCIDAERRCDGELNCADKSDE
HDCETICPPGQFRCADNRCIMKKQQCDSYSDCPDGSDELACEHISPSFIPNPDPKPIVPV
IAIILLVFVIGGAYFVCQRVVCRCYQGPNGAFPHEYISGTPHVPLNFIAPNGSQHGTFQG
ISCGKSIMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQILNPPPSPATDRS
LYNTEVFYSSNSPSTTRSYRHYHPIRGAAPPTTPCSTDVCDSDYTPHHPAAGLSSSVGRW
KPSGHGNHGNHGKHNKYYMDLNSDSDPYPPPPTPRSQYLSAEESCPPSPSTERSYFHLCP
PPPSPCTDSS
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtgctgctgtggagctgcctgctgtcggcggtctgcgggtcccccctcctc
ctctttgccaaccggcgtgatgtgcggttggttgatgctgacggtttgcggggcgagtcg
gccatcgtcgtcggcgatctggaagacgcgacggcgctggacttcctgtacgcggagggc
ctgatattctggacggatgtcagcgaggaggccataaaacaaacgcactggaaccagtcg
tccaactccctgagggaggcgctggggaccggccagactgtggtggtttcaggcttggac
agtcctgatgggctggcctgtgactggctgggtaaaaaactctactggacagactcagag
accaatcggatcgaagtggccaacctggacggcacctccaggaaggtcctgttttggatg
gacttggaccagcccagggctatcgctcttaaccccgcccaacggtacatgtactggaca
gactggggggaggagcccaggatagagcgcgctggcatggacggcagtagcaggaaagtg
atcgtgaacgtggacatacactggcccaacggtctcaccatcgatctggtggaacagaag
ctgtactgggccgatgccaaactcagcttcatccaccgggccaacctggacgggtcatca
cgagaggccgtggtggagggcaccctgacccatcctttcgctctgacgttgtccaaggag
acgctgtactggacggactggcagacccgctccatccacgcctgcaacaaacacagtgga
gacaaaaccagggagatcctcagtggcatcttctctcccatggacatccaggtcctggag
gagtaccggcagcccgacatccagacgccgtgcaccaacgacaacggcggctgcagtcat
ctgtgcctgctgtctcccgtccagccgttctacagctgtgcctgtcccactggagtccag
ctcaaaccggatggcaggacgtgcaagccaggggcggagcaagttctgctgctggctcga
cggaccgatctgaggagaatctccctggacctgccggacttcaccgacatcgtcctccag
gtcgatgacatccgccacgccatagcgatagactacgaccccatcgaaggctacgtctac
tggacggacgacgaggttcgtgccatccggcgatcccgcatcgacggcagcaacgccaca
gtgctggtcaccacggagatcaaccacccagacggcatcgctgtggactgggtggccaga
aacctgtactggacggacaccggcactgaccggatcgaggtcaccaggctgaatggaact
tctcggaaaatcctgatttcggagaacctggatgaacccagagccatcgttgtagatcct
gtaaacgggttcatgtactggaccgactggggtgagcgtcccaaaatcgagcgagccaac
ttggacggaacggaccggctggttctgctcaacacctctctgggctggcccaatggactg
gctctggactacactgcgggaaaactgtactggggagatgctaaaacggacaagatagag
gtgatcaacgtggacggtagcgacaggaggactttgctggaggacaagctgcctcacatc
ttcggttttactctgctgggcgactacatctactggacggactggcagagacgcagcatc
gagagggtccacaagaccacggcggtacgagagatcatcatcgaccagctgccggacctg
atggggctgaaggccaccaaggtgacggagacgcatggtaccaacggctgcgcggggagc
aacggcggatgcagccacctgtgtttttggcgtcagcatgcggtcagctgctcctgtccg
atggggatggagctcctgtcggacctgcagacgtgcgtggtccccgaggcgttcctgctc
ttcaacaacagggacagcatccggagcatttctctgggaaccaacagcaacgatgtggct
atccctctgacaggagtcaaagaagcctcctctcttgactttgacgtgtcggagagaagg
atctactggaccgacatccaggccaagaccatcagcagagcgtacatgaacggcagctcc
gtggaacacgtcatcgagtttggcctggactacccagagagcattgcggtggactggatg
ggtcacaacatctactgggcagatacgggtcctaaacggatcgaggtggcccggctggac
ggccagcaccgccaggttctggtctgtaaggatctggacaacccacgatcactcgcgctg
gacccagctaacggctacatgtactggacagaatgggggggtcgtccacgcatagccaga
gcctacatggacggcagcaccatcacaaccatcgtggataaggtgggccgcaccaacggg
ctgaccatcgactacgcagaccagcgactctactggacagatatggacacctgtatgatt
gaaagcaccaacatgcaaggcctccagagggagatcatcgtggacgaccttcctcacccc
ttcggcctgactcagtacagagacttcatctactggacggattttaaccttcgcagcatt
gaacgggccgacaaacggagcggactgaaccggacggtggtgctgcagggtcagctggag
ctgatgctggacatcctggtgttccactcgtcccgccaggacggcaccaacggctgttcc
cacaacaacgggaactgcgcccacctctgcctggcgtctcctgccggcgcccagtgccgc
tgcgcctcccactacaccctcaacccggacggacgcaactgcagctctccgtccagcttc
ctgctcttcagccagaaggccagcatcagcaggatggttctgggagagcagagtcctgac
gtcatcctgcccatccacgtcctcaggaacgtccgagccctcagctacgaccccctggac
cgactcatctactggctggatggacgccagaacatacgcagggccagagacgatggaacc
acgacttccatgatcatgagcagctctgctcagctagtggacaatcagctccacgacctg
agcctggactcctacagtcgccacatctactggacctgcgagaccaccaacaccatcaac
atccagaggatggacggctccctcgtcggggtggttttgaaggacgacacggacaagccg
agggccatcgtcgtcaacgctgagagagggtacatgtacttcaccacggttcaggagcgc
tcggccaagatcgaaggatgcagtctggacgggacggagagggagtctctgttcgccacc
ggcctgatccggcccgtggccctgactctggacaacaaactgggaaaactgttctgggtc
gatgccgacctcaaacgcatcgagagcagcgacctgacaggggccaatcgcatcgtcctg
caggactccaacatcctccagccaatgggcttggccattctaggggaccacctctactgg
attgaccgacagcagcagatgattgagagagtggacaaactgaccggagacggtcgcagt
cgcgtccagggacggatctcctacctgacggcgatccatgcggtggaggagatggacccg
gaggagtttgcatcccacccctgttcccgtgacaacggaggctgctctcacatctgtatc
gctaagggcgacggaacacctcgctgctcctgtcccatgcacctggtgctgctgcaggat
ctgctgcactgtggagagcctcccacctgctccacagagcagttcacctgttccacgggg
gagatcgactgcatccccatggcctggcgctgcgacggcttccctgaatgtgacgacggc
agcgatgaagaaaactgccccgtctgctctgccttccagtttcagtgtgatgaaggcacc
tgcatcgatgctgagagacgctgcgacggggaactaaactgcgctgacaagtctgatgag
cacgactgcgaaaccatctgcccccccggccagttccgctgcgctgataaccgctgcatc
atgaagaagcagcagtgtgacagctactccgactgtcccgacgggtccgatgagctcgct
tgtgagcacatttccccgagcttcatccccaacccggaccccaaacccatcgtgccggtc
atcgccatcatcctgctggtgtttgtgatcgggggggcgtacttcgtgtgccagcgggtg
gtgtgccgctgctaccagggccccaacggcgcctttccccacgagtacatcagcgggacc
ccccacgtccccctcaacttcatcgcccccaacggctctcagcacggcaccttccaagga
atctcctgtgggaagtccatcatgagctcggtcagtctgatgggcagcagcagcagcggg
gcgccgctctacgaccggaaccatgtgaccggggcgtcgtccagcagctcctcctccacc
aagggagccttctaccctcagatcctgaaccctcctccttctccggccaccgaccgctct
ctctacaacacggaggtcttctactcgtccaacagtccgtccaccaccagatcctacagg
cactaccacccgatccgcggcgccgcccccccgaccacgccctgcagcactgacgtctgc
gacagcgactacaccccccaccaccccgcggccgggctgtcgtcgtcggtcggccggtgg
aagccatcgggccacggtaaccacggcaaccatggcaagcacaacaagtactacatggac
ctgaactcagactctgacccgtaccctccgccccccacgccccgctcccagtacctgtcg
gcggaggagagctgccccccgtccccctccacagagcggtcctacttccacctgtgtccc
cctccgccctccccctgcaccgactcctcatga
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integrated database retrieval system
