Cololabis saira (Pacific saury): 133444113
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Entry
133444113 CDS
T09849
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133444113
Transcription factors [BR:
csai03000
]
Eukaryotic type
Other basic domains
RF-X
133444113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
133444113
NCBI-ProteinID:
XP_061577618
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All DBs
Position
5:33085914..33099613
Genome browser
AA seq
1461 aa
AA seq
DB search
MAEDQQQPATHKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEK
FTDIEKLYLYLKLPSGPSSGNDKRTENERGSSTPGLCDQSSMSSSRTQQMYAFNWIRNHL
EEHPETSLPKQEVYDEYKSYCDNLGYSPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCY
SGLRKKAFVHMPSLPNLDLQKSGDGCELMESSGQSPNAEDEMRSAACGLVCEWAQKVLSR
QFDSVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKT
LPSPSVDAKQQLQRKIQKKQQEQKLQSPLPGESQIKRAETSTPGPTIPCGSPALLSPQPT
IGIVVAAVPSPVTVQRNRQLMTSPSPVGTAEGKVLPVNFQVVTQSIKQSPKTPQNIPASP
VGDRVARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMPNPHVSSVNVVKMTAI
ALAPSSNSSNVRPASAGLGNTALLDDSHHQSSAAPHSPAVRSSALTLTPTLCADPKGLSE
AGSDASAMSVKEERVAKFRAASEPSFLVKCSPGSDRGVRIKSESTTLPAPVAAAGTQDSN
NSNCHDSTLYLTVDNQNSHSNTSSNASSVVCTTMKDACPDAKSPRKRAAGEPHVIPVKRV
FISQQPLAIIDNPRLGVSIADKRIPRPGTPARPESAPCKGTAKHTHIGPTQILALTDIPI
AHKEGMQVSVKQQDMLVKHEDHSASADTNAGVVGSSATDQALLQQITGDPRAIPANSGPH
EASVMTELKSTMWDTQPMSAEHKQTPSDHISMMAQPSEPSGQLSLAQEMVDFGGSQSSID
YFPFNDDDMTQDSIVEELVQMEEQMKLKGLFVNCVDVPLQGQSAGGQGSMLGAHQAGATF
YHSAHSSTTPVQTPTPTPTPTPTPTPTSEMTLSHSLTRESPCSRMAPITPVDGAMGRHTP
ISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPVKPMQRPMATHPDKA
KLEWINNRYNSNAAGPLSNHSIGILPSYQDLVDDQFRKPHAFAIPGQSFQAQSRPDAAHF
GILNPISPVQQQQQVTSVATATKQESFAVPAPLDNKASTSSASGTFRCRSVSPAVRQRNF
SGNTATATATATSTTVTTRAVVSPFSSPITSEVLSILSNSQGVGSVHSMVQRSQSVPLNI
MMQSEMLPVQGPSNTAKITNVLLSKMEAEGDDSVRGLGMNNLPSNYTARMNLTQILETNP
AFAGGAAGQTALPGGSTPAAFELQQHGYLAAGGSEQGSFPAGDSQAQAGEQDQQQQQPPL
QQDPAQTQPQLLLQSTQQQEAEDEQQQLDFNNTVKDLLGEDGLNPSSQLVGQVASELNAV
ASDFSNDIRLTSDLSSSITDLNTLDTNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDT
VNSGFDWLESKDQPTTVEMLG
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggatcaacaacaacctgcaacccacaagcccgcctcggggctgggctcgctc
ccggcgctggtgccggggctgcaggggcccgaggccaacgcgctgcagttcaaaatcaag
aattccatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgagaag
tttacagacattgaaaagctctacctctaccttaagctgccttctggtcccagcagcggc
aatgacaaaaggactgagaatgagagggggtcctccactcctggattatgtgatcagagt
tccatgtcgtcgagccgtactcagcagatgtatgcattcaactggatacgcaatcacctg
gaggagcacccggagacgtccctccccaagcaagaggtgtacgatgaatacaagagctat
tgtgacaatctgggctacagtcctctgagtgcagcagactttgggaagatcatgaagaat
gtctttcctaacatgaaggctcgccgcctgggcatgaggggcaagtccaaatactgttat
agcgggttgaggaagaaggcttttgttcacatgccgtccttacccaacctggatctgcag
aaatctggagacgggtgcgagctgatggagtcgtcgggccagtccccgaacgccgaggat
gagatgagatctgcagcctgtggactggtgtgtgagtgggctcaaaaggtcctgagtcgg
cagtttgacagcgtggaggacttggctcgcttcctgctgaatagccactacattggtacc
aagtccatggctgcgctcaccgtgatgacgggaacccccacaggaatgaagaccccgact
ccggcctctgcgtttgtgcccaccgccgaggcgaactcgttccagccccaggtgaagacc
ctgccctccccgtctgttgatgcaaagcagcaattgcaacgtaagatccagaaaaagcag
caagagcagaagctgcagtcccccctgcccggtgagagccagatcaagcgagcagagacc
agcacccccggtcccaccattccctgtggaagcccggcgctgctctccccccagcccacc
atagggatcgtagtagcggctgttcccagcccggtcacggtacagaggaaccggcagctg
atgacctcccccagccccgtggggacagcagaaggaaaggtgttgcctgtgaacttccaa
gtggtcactcagtccatcaaacagtctcccaaaaccccccagaatatcccagcgagtcct
gtaggcgaccgggtggccagacacggtacacgatacgcccagatcctgcccaagccctct
gccaccagtgccatcacgctgcgctctccccccaccctgctcatcaccaacagccccatt
aaaactgtgatgcccaatccccacgtcagctcggtcaacgtggtgaagatgacggccatt
gctttagcgcccagcagtaacagcagcaacgtgcggccggcttcggctggcctcggcaac
acagcccttttggacgattcccatcatcagagttcggctgcccctcattctcctgcagtc
aggtccagcgccctgacgttaacccccaccctgtgtgctgaccccaaagggctgtctgaa
gctggaagtgacgctagcgccatgagcgtcaaggaggagagggtggctaagttcagggcc
gccagtgagccgagcttcctggtgaagtgttcccccggatcagacagaggggtcaggata
aaaagcgagtccacaacccttcccgcccccgtagctgcagctgggactcaggacagcaat
aacagtaactgccatgacagtactttgtacttgactgttgataatcagaactcacacagc
aacacatcatctaacgcctcatctgtcgtttgcacgacgatgaaagatgcctgcccagat
gccaagagcccgaggaagcgtgcagctggggagccccacgttattcctgtgaagagggtg
tttatttcccagcagccacttgccattatcgacaatcccagacttggggtcagtattgca
gacaagaggattcccagaccaggaacccctgcaagaccggagagtgccccctgcaaaggg
actgcaaaacacacacatatagggcccacacagatccttgcactcactgacatacccatc
gcacacaaagaggggatgcaggtgtctgtcaagcagcaggacatgctggtgaagcatgaa
gaccattctgccagcgctgataccaacgctggggtggttggcagcagcgccactgaccaa
gcactgctgcagcagatcactggagaccctcgtgccataccagccaactcaggaccacac
gaagcctctgtgatgactgaactaaaaagcacaatgtgggacacacagccgatgtcagca
gaacacaaacaaaccccttctgaccatatttcaatgatggcccaaccttcggagccgtcg
ggccagctcagcctcgcacaggagatggtcgactttggagggtctcagtccagcatcgac
tatttcccgttcaatgatgacgacatgacccaggacagcatagtggaggagctggtccag
atggaggagcagatgaagctgaagggcctgtttgttaactgcgtcgacgtgcccctgcag
ggtcagtcggccggcggccagggctccatgctcggcgcccaccaagccggcgccaccttc
taccactcggcccacagcagcaccactcctgtccagacccccactccgacgcccaccccg
accccgacgcccacccccacctccgagatgaccctctcccacagcctgacgagagagagc
ccctgctcccggatggcccccatcactcccgtggacggagccatgggtcgccacaccccc
atcagcaccccgctgtccaactgcagcagcagcgtgcccccgagccccgtggagtgcagg
aaccctttcgctttcacacccattaactccagcatcacgggttaccacgacgcgagcatc
gtctccagcagccccgtcaagcccatgcagaggcccatggccacacacccggacaaggcc
aagctggagtggatcaacaaccgctacaacagcaacgctgccggccctctgtccaaccac
agtatcggcatcctgcccagctaccaggacctggtagatgaccagtttcgtaagcctcat
gcatttgcaatccccggccagtcgtttcaggctcagtccaggccggacgccgctcacttc
ggcatcttgaatcccatttctccggtgcagcaacaacagcaggtaacgagtgtcgctact
gccactaaacaggagagttttgccgtgcccgccccgctggacaacaaagcctcaacctca
tctgcatccggtactttccgttgccgtagcgtcagccctgcggtgcggcagcggaacttc
agcggcaacaccgccacggccacggccaccgccaccagtaccacggtaacaactcgagcg
gtggtgtcgcccttcagctcccccatcacctctgaggtactcagcatcctgtccaacagc
cagggcgtcggctctgtgcacagcatggtccagcgcagccagtcggtgcctctgaacatc
atgatgcagagcgagatgctgccggtccagggcccgagcaacacggccaaaatcaccaac
gttcttctcagtaagatggaagccgaaggggacgattctgtccgtggtctgggcatgaac
aacctcccctccaactacacggctcgcatgaacctcacgcagatcctggagaccaaccct
gcgttcgcgggaggggccgccggacagacggcgctgcccggcggctccacccctgctgcc
tttgagctgcagcagcacggctacctggccgccggcgggagcgagcaggggagttttcct
gcaggggacagtcaagcacaagcaggtgagcaggaccagcagcagcagcagccgccgctc
cagcaggatccggcgcagacacaaccacagctcctcctccagagcacacagcagcaggag
gcggaggacgagcaacagcaactggacttcaacaacactgtcaaggacctgctgggggag
gacggcctcaaccccagctcccagctggtgggtcaggtggcctcggagctcaacgccgtg
gcgtccgacttctcaaacgacatcagactgacctcggatctgtccagtagcatcactgac
cttaacacgttggacaccaacctgctgtttgatcccaatcagcagcaggaacaatacgaa
gactcgacactggaagaactgaagaacgacccgctgtttcagcagatatgcagtgatact
gtaaactctggttttgactggctagaaagcaaagaccagcccaccacggtggagatgctg
ggctaa
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