KEGG   Cololabis saira (Pacific saury): 133444118
Entry
133444118         CDS       T09849                                 
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
  KO
K10357  myosin V
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:csai00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    133444118 (myo5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133444118 (myo5c)
   04131 Membrane trafficking [BR:csai04131]
    133444118 (myo5c)
   03029 Mitochondrial biogenesis [BR:csai03029]
    133444118 (myo5c)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csai04812]
    133444118 (myo5c)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     133444118 (myo5c)
   mRNA cycle factors
    P-body specific factors
     133444118 (myo5c)
Membrane trafficking [BR:csai04131]
 Others
  Actin-binding proteins
   Myosins
    133444118 (myo5c)
Mitochondrial biogenesis [BR:csai03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    133444118 (myo5c)
Cytoskeleton proteins [BR:csai04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     133444118 (myo5c)
SSDB
Motif
Pfam: Myosin_head DIL IQ nSTAND3 AAA_22 Myosin_N AAA_16 NPHP3_N FTHFS
Other DBs
NCBI-GeneID: 133444118
NCBI-ProteinID: XP_061577627
LinkDB
Position
5:33151889..33165802
AA seq 1742 aa
MALFELYSKYNRVWIPDAEHVWKSAEITKNFNSGDKNLELLVEDGTEYQHPINPSRPELP
PLRNPDILVGENDLTALSYLHEPAVLHNLRVRFVESRIIYTYCGIILVAVNPYRQLPIYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEIGFDKRYRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCADSPEFTDLRLLAADKFRYTSTGGDVTIEGVD
DRKDMEETRRTFSVLGLKENFQSDVFKVLAAVLHLGNVEIRSSGDDKSAVPPSDAHLAIF
CKLLGVSAEALLRWLCNRRIVLAAETVVKPVPRERAVATRDALAKQMYAHLFDCIIGRIN
TVLQVPGKQHAFTGVLDIYGFETFDINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
GIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLYRYLEANPLFEKP
RLSSQAFVMQHFADKVEYQCRGFLDKNRDALYEELVDTMKASQFPFLAGLFQEEEQSAGA
KSGVQVKPARPAVKPANKQLRSSVGDKFRTSLSLLMETLNASTPHYVRCIKPNDDKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHVEADLKDKKRTCKDV
LQRLIQDPDQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTVQKHVRAWSQRRRFLRTR
AAAVTLQQYIRGTKTIRKPVSAATLKQGWATVVIQRHWRGYRTRQIFQAVRLASITIQAF
TRGWMARRCYKKMMKEHKALVLQKYARAWLVRRRFQTMRRLVLNVQLSYRVQKLRKKIDE
QNKENRGLMERLTSLANSQSQALDRLHGLEAQLDKTTKQKAALEAREQKAKEDATLTIAQ
LQQEIDALVCGKQSSEKRFEASMKEVKESFDQVKRTLQEERENEARLRKIAENNIEIQKH
DHEKEIATLKEEMRRLKEGRVVLQRQVEEGVLGNAELQEQVVQLTKHAKVIPELRRDLNN
LQNQKSAVEQRMKQQSEQTRAKVKEIVRQLLGGVVEEQVLLGLTADDPEKISEPEDLLGA
LGGLQRATRILENQHKEHKVSSETQAEGWRLKVEHLQNENGTLQSLFQEKSDVNDSICQE
VARLSSENSLIPELKLQVSELQRQKQELDGRLKQQNKELTEKNQEITNVLQMKIAEERSQ
RTHFEEKARELEEAREELRGRMEELEEENEHLKRQQLMEGEVKRKLREETSRLTAESMDL
EEQLDQRDRLIKKLRSQIKSLERSQKAKQNPVSTIPKDYLGMLEYKREDEPRLVQNIILD
LKPKGVAVNMLPSLPAYILFMCVRHADYLNDGAKLKSLMNAVIFGIKKVIMGHHKDFEML
SFWLSNTYQLLNCLKQYGGEEEFVKHSTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQLV
TVMQKTLAPTIVPGMLEHESLQGISSMKPTGFRKRSNSVYDESETYTISSILQHLSVFHS
TMLHHGMDQGLIRQATKQLFLLVGATTLNNMMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIDTLRPLAQAAWLLQVSKATDDDAGEIVEKCTELNPVQIVKILNSYTPIDDFE
KRVASSFVKKVQSLLQDHDGSSHLMLDTDYRFQVTFPFCPSSQALELLQVPSSLHLSFLT
RI
NT seq 5229 nt   +upstreamnt  +downstreamnt
atggctttgttcgagctgtactcgaagtataacagagtttggataccagatgcagaacat
gtgtggaaatcggctgaaattacaaaaaactttaattctggagataaaaatcttgaatta
ctcgtcgaagatggcactgagtaccagcaccccatcaacccgtccagaccagaactccct
cctcttagaaacccggacatcttggtgggagagaacgacctgacagctctcagctacctg
cacgagccagcggtcctgcacaacctcagagtccgctttgtggagtccaggatcatctac
acctactgcggtattattctggtggcagtgaatccctacagacagcttcccatctacggc
gatgcagtcattcatgcctactcgggccagaacatgggagatatggaccctcatatcttt
gcagtggcagaggaggcgtacaagcagatggcgagaaaccacaagaaccagtccatcatc
gtcagcggggagtctggagccggcaagacggtctcggctcgatacgctatgaggtacttt
gctgttgtgagcaaatctggaagtaagactcgggttgaagacaaagtgctggcgtccaac
ccaataacggaggcgatcggaaacgcaaaaaccacccggaacgacaacagcagccgtttt
gggaaatataccgaaatcggcttcgataagcggtaccgaatcatcggggcaaacatgagg
acctacctgttggagaagtccagggttgttttccaggcagagaatgagcgaaactatcac
atattctaccagatgtgctcctgtgcagactcgccggagttcacggacctcagactgttg
gctgcagataagttcaggtacaccagcacgggcggtgacgtcaccatcgaaggtgtggat
gacaggaaggacatggaggagactcgacggaccttctctgtgctgggtttgaaggagaac
tttcagtcagatgtgtttaaagttctggccgcagttttgcatttggggaatgtggagatc
agaagctcaggagatgacaagtctgcggttcctcccagcgatgcacatctggcaatcttc
tgcaagctgctgggagttagcgcagaggctctgctgcgctggctgtgcaatcgcaggatc
gttctggcggctgaaaccgtggtgaagccggtgcccagggaacgggccgtcgccaccaga
gacgctctggccaagcagatgtacgcccacctgtttgactgcatcatcggcaggatcaac
accgtgctccaggttcctgggaagcagcacgctttcacgggggtcctggacatttacggc
ttcgagacgttcgacatcaacagctttgagcagttttgtatcaactacgcaaatgagaag
ctgcaacagcagtttaacatgcacgtgttcaagctggagcaggaggagtacatgaaggag
ggcatcccatggacgctgatagatttctacgacaaccagcctgtcattgacctgattgaa
gccaagatggggatccttgacctgctggacgaggagtgtctgttccctcaaggcaccgat
cagagctggcttcagaagctgtaccggtatctggaggccaaccctctgtttgagaagccc
cggttgtccagccaggcgtttgtgatgcaacactttgcagacaaggtggagtatcagtgc
agagggtttctggacaagaatcgagacgctctctacgaggagctggtggacacgatgaaa
gccagtcagttcccctttctggccggcctttttcaagaggaggagcagagcgctggagcc
aagagtggcgtgcaagtgaagccggccaggcctgcggtgaaaccagccaacaagcagctg
agaagctctgtgggagataagttccggacctcgctgtctctgctgatggagacgctgaac
gcctccacgcctcactacgtgcgctgcatcaagcccaacgatgacaagctcccgtttgag
tacgactccaggagggtggtgcagcagctgcgagcgtgcggcgtccttgaaaccattcgc
atcagcgcgcagagctacccgtccaggtggacgtacattgagttttacagccgctacagt
atcctcatgtcccacgtggaggcggatctcaaggacaagaaacggacctgcaaggatgtg
ctgcagagactcattcaggaccccgaccagtacaagtttggccgcacgaagatcttcttc
cgggccggtcaggtggcgtatctggagaagctgcgcctggaccgcctccggggcgcctgc
gtgaccgttcagaaacacgtccgcgcgtggagccagaggaggaggttcctgaggacgagg
gcggcggccgtcaccctgcaacagtacatacggggaacgaagacgatccgtaaaccggtg
agtgcagcgacgctgaagcagggctgggccacggtggtcattcagagacactggagaggc
taccggacgaggcagatctttcaggcggtccgcctggcttccatcaccatccaggccttc
acccggggctggatggcccgcagatgctacaagaagatgatgaaagagcacaaagctctg
gttctacagaagtacgccagagcgtggctggttcggcggcgctttcagaccatgcgtcgg
ctggtgctcaacgtccagctgtcctacagggtgcagaagctccggaagaagatagacgag
cagaacaaggagaaccgtggattgatggagagactgacgagcttagccaactcccaatct
caagctttggacagacttcacggtctggaggcccagctggacaaaaccaccaagcagaag
gcggctctggaggcgagagagcaaaaagcaaaagaagacgccactttgacaatcgcacag
cttcagcaggagatagatgctctggtgtgtgggaagcagagctcggagaaaaggtttgaa
gcatccatgaaagaagtcaaagagagctttgaccaggtgaagaggactctgcaggaggag
agagaaaatgaggcgagactgagaaagattgcagaaaacaacatcgagattcagaagcac
gaccatgaaaaagaaatagcaactctgaaggaagagatgaggaggctgaaggaggggaga
gtggtgctgcagaggcaggtggaggagggcgtgctggggaacgctgaactgcaggaacag
gtcgtccagctcaccaagcacgctaaagtcatcccggagctccgcagggacctgaacaac
ctgcaaaatcagaagagtgccgtagagcaaaggatgaagcagcagtcagaacaaacaaga
gctaaagtgaaggagatcgtgaggcagcttctcgggggtgtcgttgaggaacaagttctt
ttggggctgacggccgatgatcccgagaagattagtgagcctgaagacctgctgggagcc
ctggggggcctgcagagagccaccaggattctggagaaccagcacaaggagcacaaggtc
agctctgagacacaggcggagggctggagactgaaggtggagcacctccagaacgagaac
ggcacgctgcagagcctgttccaggagaaaagtgacgtcaatgacagtatttgccaggaa
gtggctcggctcagcagcgagaactcgctcataccggagctgaaactgcaggtctcagag
ctgcagaggcagaagcaggagctggacggccggctcaagcagcagaacaaggagctgaca
gaaaaaaaccaggagatcaccaacgttctccagatgaagattgcagaagagcgctcacag
cgcacgcattttgaggagaaagccagagagctggaggaggcaagggaggagcttcgaggg
aggatggaggagcttgaagaggagaacgagcacttgaagaggcagcagctgatggagggc
gaagtgaagaggaaactgagagaggagacgtcgcggttaaccgctgagagcatggacttg
gaagagcagctggatcagagggacagattaataaagaagctccggagtcaaataaaaagc
cttgaaagatcccagaaagccaaacaaaaccctgtgtccaccatcccgaaggactacctg
ggcatgttggagtacaagagagaggacgaaccccggctcgttcagaacatcattttggac
ttgaagcccaaaggtgtagcggtcaacatgcttcccagtctgccggcgtacatcctgttc
atgtgcgtccgccacgccgactacctcaacgacggagccaagctcaagtctctgatgaac
gccgtcatatttggcatcaagaaagtcatcatgggtcaccacaaagactttgagatgctg
tccttctggctgtccaacacgtaccagctgctcaactgcctgaagcagtacggcggggag
gaggagttcgtgaaacacagcacgcctcggcagaagaagaactgcctgcagaactttgac
ctgtctgaacacagacagatcctcagcgacctggccatccacatctaccatcagctggtc
acggtcatgcagaagacgctcgctcctactatcgtgcctggcatgttggagcatgagagc
ttacaggggatctccagcatgaagcccacgggcttcagaaaacgctccaacagcgtttac
gacgagtcggagacctacaccatctcctccatcctccagcacctttcggtcttccactcc
accatgctccaccacggcatggaccagggcctcatcagacaagccaccaagcagctgttc
ctcctggtgggggccaccacgctcaacaacatgatgcttcgcaaagacatgtgctcctgc
aggaaaggcatgcagatcaggtgcaacatcagttatctggaggagtggctgaaagagaag
gagcttcaaagctctaatgccatcgatactctgaggccgctggctcaggccgcctggctg
ctgcaagtcagcaaggccacggatgacgacgccggcgagatcgttgagaagtgcactgaa
ctcaacccagttcagattgtcaagattttgaattcctacacacctattgatgattttgag
aaaagagtagcgtcatcgtttgtgaagaaggttcagtcgttacttcaagatcacgacggg
tcgtcacatctgatgctggacacagactatcggttccaggtcacgtttcctttctgcccg
tcctcgcaggctctggagctgctgcaggtcccgagcagccttcacctcagctttctgacc
cggatctga

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