Cololabis saira (Pacific saury): 133444118
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Entry
133444118 CDS
T09849
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133444118 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133444118 (myo5c)
04131 Membrane trafficking [BR:
csai04131
]
133444118 (myo5c)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133444118 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133444118 (myo5c)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
133444118 (myo5c)
mRNA cycle factors
P-body specific factors
133444118 (myo5c)
Membrane trafficking [BR:
csai04131
]
Others
Actin-binding proteins
Myosins
133444118 (myo5c)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
133444118 (myo5c)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
133444118 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
AAA_16
NPHP3_N
FTHFS
Motif
Other DBs
NCBI-GeneID:
133444118
NCBI-ProteinID:
XP_061577627
LinkDB
All DBs
Position
5:33151889..33165802
Genome browser
AA seq
1742 aa
AA seq
DB search
MALFELYSKYNRVWIPDAEHVWKSAEITKNFNSGDKNLELLVEDGTEYQHPINPSRPELP
PLRNPDILVGENDLTALSYLHEPAVLHNLRVRFVESRIIYTYCGIILVAVNPYRQLPIYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEIGFDKRYRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCADSPEFTDLRLLAADKFRYTSTGGDVTIEGVD
DRKDMEETRRTFSVLGLKENFQSDVFKVLAAVLHLGNVEIRSSGDDKSAVPPSDAHLAIF
CKLLGVSAEALLRWLCNRRIVLAAETVVKPVPRERAVATRDALAKQMYAHLFDCIIGRIN
TVLQVPGKQHAFTGVLDIYGFETFDINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
GIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLYRYLEANPLFEKP
RLSSQAFVMQHFADKVEYQCRGFLDKNRDALYEELVDTMKASQFPFLAGLFQEEEQSAGA
KSGVQVKPARPAVKPANKQLRSSVGDKFRTSLSLLMETLNASTPHYVRCIKPNDDKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHVEADLKDKKRTCKDV
LQRLIQDPDQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTVQKHVRAWSQRRRFLRTR
AAAVTLQQYIRGTKTIRKPVSAATLKQGWATVVIQRHWRGYRTRQIFQAVRLASITIQAF
TRGWMARRCYKKMMKEHKALVLQKYARAWLVRRRFQTMRRLVLNVQLSYRVQKLRKKIDE
QNKENRGLMERLTSLANSQSQALDRLHGLEAQLDKTTKQKAALEAREQKAKEDATLTIAQ
LQQEIDALVCGKQSSEKRFEASMKEVKESFDQVKRTLQEERENEARLRKIAENNIEIQKH
DHEKEIATLKEEMRRLKEGRVVLQRQVEEGVLGNAELQEQVVQLTKHAKVIPELRRDLNN
LQNQKSAVEQRMKQQSEQTRAKVKEIVRQLLGGVVEEQVLLGLTADDPEKISEPEDLLGA
LGGLQRATRILENQHKEHKVSSETQAEGWRLKVEHLQNENGTLQSLFQEKSDVNDSICQE
VARLSSENSLIPELKLQVSELQRQKQELDGRLKQQNKELTEKNQEITNVLQMKIAEERSQ
RTHFEEKARELEEAREELRGRMEELEEENEHLKRQQLMEGEVKRKLREETSRLTAESMDL
EEQLDQRDRLIKKLRSQIKSLERSQKAKQNPVSTIPKDYLGMLEYKREDEPRLVQNIILD
LKPKGVAVNMLPSLPAYILFMCVRHADYLNDGAKLKSLMNAVIFGIKKVIMGHHKDFEML
SFWLSNTYQLLNCLKQYGGEEEFVKHSTPRQKKNCLQNFDLSEHRQILSDLAIHIYHQLV
TVMQKTLAPTIVPGMLEHESLQGISSMKPTGFRKRSNSVYDESETYTISSILQHLSVFHS
TMLHHGMDQGLIRQATKQLFLLVGATTLNNMMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIDTLRPLAQAAWLLQVSKATDDDAGEIVEKCTELNPVQIVKILNSYTPIDDFE
KRVASSFVKKVQSLLQDHDGSSHLMLDTDYRFQVTFPFCPSSQALELLQVPSSLHLSFLT
RI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttcgagctgtactcgaagtataacagagtttggataccagatgcagaacat
gtgtggaaatcggctgaaattacaaaaaactttaattctggagataaaaatcttgaatta
ctcgtcgaagatggcactgagtaccagcaccccatcaacccgtccagaccagaactccct
cctcttagaaacccggacatcttggtgggagagaacgacctgacagctctcagctacctg
cacgagccagcggtcctgcacaacctcagagtccgctttgtggagtccaggatcatctac
acctactgcggtattattctggtggcagtgaatccctacagacagcttcccatctacggc
gatgcagtcattcatgcctactcgggccagaacatgggagatatggaccctcatatcttt
gcagtggcagaggaggcgtacaagcagatggcgagaaaccacaagaaccagtccatcatc
gtcagcggggagtctggagccggcaagacggtctcggctcgatacgctatgaggtacttt
gctgttgtgagcaaatctggaagtaagactcgggttgaagacaaagtgctggcgtccaac
ccaataacggaggcgatcggaaacgcaaaaaccacccggaacgacaacagcagccgtttt
gggaaatataccgaaatcggcttcgataagcggtaccgaatcatcggggcaaacatgagg
acctacctgttggagaagtccagggttgttttccaggcagagaatgagcgaaactatcac
atattctaccagatgtgctcctgtgcagactcgccggagttcacggacctcagactgttg
gctgcagataagttcaggtacaccagcacgggcggtgacgtcaccatcgaaggtgtggat
gacaggaaggacatggaggagactcgacggaccttctctgtgctgggtttgaaggagaac
tttcagtcagatgtgtttaaagttctggccgcagttttgcatttggggaatgtggagatc
agaagctcaggagatgacaagtctgcggttcctcccagcgatgcacatctggcaatcttc
tgcaagctgctgggagttagcgcagaggctctgctgcgctggctgtgcaatcgcaggatc
gttctggcggctgaaaccgtggtgaagccggtgcccagggaacgggccgtcgccaccaga
gacgctctggccaagcagatgtacgcccacctgtttgactgcatcatcggcaggatcaac
accgtgctccaggttcctgggaagcagcacgctttcacgggggtcctggacatttacggc
ttcgagacgttcgacatcaacagctttgagcagttttgtatcaactacgcaaatgagaag
ctgcaacagcagtttaacatgcacgtgttcaagctggagcaggaggagtacatgaaggag
ggcatcccatggacgctgatagatttctacgacaaccagcctgtcattgacctgattgaa
gccaagatggggatccttgacctgctggacgaggagtgtctgttccctcaaggcaccgat
cagagctggcttcagaagctgtaccggtatctggaggccaaccctctgtttgagaagccc
cggttgtccagccaggcgtttgtgatgcaacactttgcagacaaggtggagtatcagtgc
agagggtttctggacaagaatcgagacgctctctacgaggagctggtggacacgatgaaa
gccagtcagttcccctttctggccggcctttttcaagaggaggagcagagcgctggagcc
aagagtggcgtgcaagtgaagccggccaggcctgcggtgaaaccagccaacaagcagctg
agaagctctgtgggagataagttccggacctcgctgtctctgctgatggagacgctgaac
gcctccacgcctcactacgtgcgctgcatcaagcccaacgatgacaagctcccgtttgag
tacgactccaggagggtggtgcagcagctgcgagcgtgcggcgtccttgaaaccattcgc
atcagcgcgcagagctacccgtccaggtggacgtacattgagttttacagccgctacagt
atcctcatgtcccacgtggaggcggatctcaaggacaagaaacggacctgcaaggatgtg
ctgcagagactcattcaggaccccgaccagtacaagtttggccgcacgaagatcttcttc
cgggccggtcaggtggcgtatctggagaagctgcgcctggaccgcctccggggcgcctgc
gtgaccgttcagaaacacgtccgcgcgtggagccagaggaggaggttcctgaggacgagg
gcggcggccgtcaccctgcaacagtacatacggggaacgaagacgatccgtaaaccggtg
agtgcagcgacgctgaagcagggctgggccacggtggtcattcagagacactggagaggc
taccggacgaggcagatctttcaggcggtccgcctggcttccatcaccatccaggccttc
acccggggctggatggcccgcagatgctacaagaagatgatgaaagagcacaaagctctg
gttctacagaagtacgccagagcgtggctggttcggcggcgctttcagaccatgcgtcgg
ctggtgctcaacgtccagctgtcctacagggtgcagaagctccggaagaagatagacgag
cagaacaaggagaaccgtggattgatggagagactgacgagcttagccaactcccaatct
caagctttggacagacttcacggtctggaggcccagctggacaaaaccaccaagcagaag
gcggctctggaggcgagagagcaaaaagcaaaagaagacgccactttgacaatcgcacag
cttcagcaggagatagatgctctggtgtgtgggaagcagagctcggagaaaaggtttgaa
gcatccatgaaagaagtcaaagagagctttgaccaggtgaagaggactctgcaggaggag
agagaaaatgaggcgagactgagaaagattgcagaaaacaacatcgagattcagaagcac
gaccatgaaaaagaaatagcaactctgaaggaagagatgaggaggctgaaggaggggaga
gtggtgctgcagaggcaggtggaggagggcgtgctggggaacgctgaactgcaggaacag
gtcgtccagctcaccaagcacgctaaagtcatcccggagctccgcagggacctgaacaac
ctgcaaaatcagaagagtgccgtagagcaaaggatgaagcagcagtcagaacaaacaaga
gctaaagtgaaggagatcgtgaggcagcttctcgggggtgtcgttgaggaacaagttctt
ttggggctgacggccgatgatcccgagaagattagtgagcctgaagacctgctgggagcc
ctggggggcctgcagagagccaccaggattctggagaaccagcacaaggagcacaaggtc
agctctgagacacaggcggagggctggagactgaaggtggagcacctccagaacgagaac
ggcacgctgcagagcctgttccaggagaaaagtgacgtcaatgacagtatttgccaggaa
gtggctcggctcagcagcgagaactcgctcataccggagctgaaactgcaggtctcagag
ctgcagaggcagaagcaggagctggacggccggctcaagcagcagaacaaggagctgaca
gaaaaaaaccaggagatcaccaacgttctccagatgaagattgcagaagagcgctcacag
cgcacgcattttgaggagaaagccagagagctggaggaggcaagggaggagcttcgaggg
aggatggaggagcttgaagaggagaacgagcacttgaagaggcagcagctgatggagggc
gaagtgaagaggaaactgagagaggagacgtcgcggttaaccgctgagagcatggacttg
gaagagcagctggatcagagggacagattaataaagaagctccggagtcaaataaaaagc
cttgaaagatcccagaaagccaaacaaaaccctgtgtccaccatcccgaaggactacctg
ggcatgttggagtacaagagagaggacgaaccccggctcgttcagaacatcattttggac
ttgaagcccaaaggtgtagcggtcaacatgcttcccagtctgccggcgtacatcctgttc
atgtgcgtccgccacgccgactacctcaacgacggagccaagctcaagtctctgatgaac
gccgtcatatttggcatcaagaaagtcatcatgggtcaccacaaagactttgagatgctg
tccttctggctgtccaacacgtaccagctgctcaactgcctgaagcagtacggcggggag
gaggagttcgtgaaacacagcacgcctcggcagaagaagaactgcctgcagaactttgac
ctgtctgaacacagacagatcctcagcgacctggccatccacatctaccatcagctggtc
acggtcatgcagaagacgctcgctcctactatcgtgcctggcatgttggagcatgagagc
ttacaggggatctccagcatgaagcccacgggcttcagaaaacgctccaacagcgtttac
gacgagtcggagacctacaccatctcctccatcctccagcacctttcggtcttccactcc
accatgctccaccacggcatggaccagggcctcatcagacaagccaccaagcagctgttc
ctcctggtgggggccaccacgctcaacaacatgatgcttcgcaaagacatgtgctcctgc
aggaaaggcatgcagatcaggtgcaacatcagttatctggaggagtggctgaaagagaag
gagcttcaaagctctaatgccatcgatactctgaggccgctggctcaggccgcctggctg
ctgcaagtcagcaaggccacggatgacgacgccggcgagatcgttgagaagtgcactgaa
ctcaacccagttcagattgtcaagattttgaattcctacacacctattgatgattttgag
aaaagagtagcgtcatcgtttgtgaagaaggttcagtcgttacttcaagatcacgacggg
tcgtcacatctgatgctggacacagactatcggttccaggtcacgtttcctttctgcccg
tcctcgcaggctctggagctgctgcaggtcccgagcagccttcacctcagctttctgacc
cggatctga
DBGET
integrated database retrieval system