Cololabis saira (Pacific saury): 133444199
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Entry
133444199 CDS
T09849
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133444199 (dennd4a)
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133444199 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
133444199
NCBI-ProteinID:
XP_061577769
LinkDB
All DBs
Position
5:34676245..34742094
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AA seq
1693 aa
AA seq
DB search
MMEDKAPRVADYFVVAGLTDSSKPLEEDLQFDDTGPRSVKPKAPITDVAVVIRSLGEEVP
PGFTCLESTPSGLSAELNGASLRGPQIFLCFKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAPKSQPHTSLAVTDVCIIVPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNAIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGAMI
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEENLLERQRSELGLSSSGLGH
DGTRNVYSNKSICLLSHWPFFQSFRSFLTFLYRYSISGPHALPIEKHISHFMQHVPFPST
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGSLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALAGVLSAPCPFIVGLDSRYFDLYVPP
ADISCVDLDTNTISQKDDKKALTWKILPRRACKHLLNSLNKLYQQLMEAGQLNREDVQMD
HTMTDSELEGGKSLHTLELEIQEAFLRFMAAILRGYRSCLQPITQAPSEKTTDVSSLFDI
QGFLKSRDRSHQRFYSLMTKTQMFSRFVEECSFVSDKDAGLAFFDECVDKLFTTGGKIDS
ERPEDTRLIELDESHRSEHTVYINPPELPPLPQGEEHPLCFSYSGFPVLRAELLEPLEGQ
KSLSACVTTRHSSPASPTAIFRRSKQEIKSAQRLAKTYSSMPQMWSKCLLRHCYGLWFIC
LPGFVSSCHSKVRALRTAYDVLRRMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVILGVLQFKQAGRKQQPPH
RDTQLSDGSDLDTLSHGSLDSANDSAERTSIDTDFTKMDSSDDGVSTGGQSDQGYDSLSK
EEERLCSRESESTPLVDDKALGQSGSGSRLVSSPSSDTSLCGVLPKTERPKSLDLSGQGF
TRLAVPLLSSAKQNHHTADRLHGVEEEDPEADKQNPLVERSASCSAGTATRTGIETGFDP
LSQMAVATEPECERENSSTPNTGRNLAEEIETYMNNGNSPLRSRTSSMDLQNPSSPLFRC
SSSPQSSTMVRSSTHLSLPKERLRPSPSLPLGVCARDRERPSSLVSPSSPTPSTSSFSMD
SLLTPTLDIFKSSVISAGKGVAEKASRLYSRLSSQTSLTQDTNSDRVSVSSLTSADAECT
SLLDNDSCLDPDGFTSPQHGNTTRVRRSPVASHHTNLSSPVNPNRVFRHNSFSGGLALPS
KAPHTPDSSPDGSRFQLIPNYIIEVLMSSCSLCKTCDCLVYDEEIMSGWTANDSNLNSTC
PFCGTAFLPFLNVEIKDLRPQNRSSTGSNPVKEEGVTVKEGSKMSATDDAAEPSAAPPKE
PESSRSAGKAAPASLPTSASDLVTVPYLSPLVLWKELESLLVNEGDQALSCPSVVDQHPI
VFWNLMWYFRRLELPSNLPALILASQHCSRGDQTPQNVSSEDSKQVLVRIMWDNPKLHQD
KVQPCYILWNTHCANSLVRSGLCEEGQLFTVELLQGFVRGIKKSDVYQPMSQIIQLLGPE
LGFKRQRSLYRDLLFLTLVALGKNNININAFDREYRLAYDRLTPGQVKLTHNCDRPPGAG
VMECRRTFGEPSL
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagcacctcgtgtagccgactactttgtggtcgccggcctcactgac
tcatccaagcctctggaagaggatcttcagtttgatgacaccggtcccaggtctgttaaa
cccaaagcccccatcaccgatgttgccgtggtgatccgttcccttggtgaggaggttccc
ccgggcttcacctgcttggaaagcaccccctctggcctatctgcagagctcaatggtgcc
agtctcaggggccctcagatcttcttgtgcttcaagagaggcagagataaacctccactg
acagatctcggggttctgtatgagtggaaggaaaagctgaaaccgggatgccacattgtc
cagaccacaccttcaggtcgccctgccaacatcagcagctcgtcctcccagcgcatctac
atcacctaccgccgcgctccaaagagccagcctcacacttcgctggccgtcactgacgtc
tgcatcattgttcctggcaagggggagacgccacctcatacgttctgcaaggtggacaag
aacctgaacagcagcatgtggggatcctccgtctacctgtgctataagaaatctctggcc
aaaacaaatgcgatcgcatacaaagcaggcctgttgtgtaggtaccctgaggaagactac
gaatcctttccgctgcccgagtcagtgcccatgttctgcctccccatgggggcaatgatc
gagtgctggccagcgcacaccaagcactccttacctgttttctctacatttgttctgacg
ggggcttctggagagaaggtgtacggagcagcgatccagttctatgagccctatcccgag
gagaacctgttggagcgtcagcgctcagagctcggcctgtcaagctccggcctcggacat
gacgggaccagaaatgtttacagcaacaagagcatctgtttactgtctcactggcccttt
ttccagtccttcaggagctttctcacattcctttaccggtactccatctctggaccacat
gcgctcccaattgaaaagcacatctctcacttcatgcagcatgtaccattcccctccact
cagagaccacgtatccttgtacagctgtcgccacacgacagcctcatgctgagccagcct
gtgtcctctccgctgcctctcagtggtgggagtctctccacattactactcaatctgggc
ccaaaaaatgcagccactctgctggtgctggcggtcaccgagcacaagatcctggttcac
tccttgcgtcctgctgtgctcaccagtgtcaccgaggcccttgtgtctatgatctttccc
tttcactggccctgcccttacatccctctgtgcccgctggccctggctggtgtgctcagt
gcgccttgtcctttcatcgtcggcctggactccagatactttgacctctatgtgcctccg
gctgatatcagctgtgtggatctggacaccaacaccatctcccaaaaagatgacaagaaa
gctttaacgtggaaaatcctgcccaggagagcttgcaaacatctcctgaacagcttgaat
aagctctaccagcagctcatggaggctggtcagctaaaccgtgaggatgtgcaaatggac
cacacaatgactgacagtgagcttgaaggtgggaagagcctccacaccctggagttggag
attcaggaggccttcctgcggttcatggcagccatcctgcgaggctaccgctcctgcctg
cagcccatcacccaggctccgtccgagaagaccaccgacgtcagctctctgttcgacatc
caaggcttcctaaagagcagggaccgctcccatcagaggttttactccctcatgaccaag
actcagatgttcagtcgtttcgtagaagagtgctccttcgtcagtgacaaagacgctggc
ctggccttctttgacgagtgcgtcgataagttatttaccactggagggaagattgacagt
gaaaggccagaagacaccagactaattgagttggatgaatctcatcgcagtgagcacacg
gtttacataaaccctccagaactgcctcctctacctcagggagaagagcatcctttgtgc
ttcagctactctgggttccctgtgttgagagctgagttgcttgagccgctggaaggacaa
aaatctttgtcagcatgcgtcaccacgcgccacagcagcccagccagccctacagccatc
tttagacgctctaaacaggagatcaaatcagctcagagactggccaaaacgtactcatca
atgcctcagatgtggtccaagtgtctgctgcgccactgttacggcctgtggttcatctgc
ttgccaggatttgttagcagctgccactctaaggttcgagctctgcgcacagcgtatgac
gttctgaggaggatgcaagacaagaagctgcaggctccagatgaggtgtgttaccgtgtg
ctgctgcagttgtgcggccagtacagtcagcccgtcttggctgtcagggtgttgtttgag
atgaagaaggccggagtccagcccaacgctattacttatgggtactacaacaaggcggta
ttggagagcacctggccctccaccaccagaggaggctacttcctttggggaaagctgagg
aacgtaatccttggcgtgctccagttcaagcaggcggggagaaaacagcagcctccacac
agggacactcagctttcagacggtagtgatcttgacacactcagtcatggcagcttggac
agtgcaaacgactctgctgagcgcacctccattgacaccgacttcactaaaatggactcc
agcgatgacggagttagcacgggtggacaatctgaccaaggctacgattccctgtcgaaa
gaggaggagaggctgtgcagcagagagagtgaaagcactccattggtggatgacaaagca
ctggggcagtctggcagcggcagccggctggtttccagtccatccagcgacacgtctcta
tgtggagtattgccaaagacagagcggcctaaatcccttgatttgtctggacagggattt
acgaggctcgccgtccctctcctcagctcagccaaacagaatcaccacaccgccgacagg
ctgcacggagtggaggaagaggatccagaggccgataaacagaatcctctggtggagagg
agtgccagctgcagcgctggaacagctacaaggaccggtattgagacgggctttgatccc
ctgtcacagatggccgtggcgacagaaccggagtgtgagcgggaaaacagtagcacaccg
aacaccggtcgcaacctcgccgaggagattgagacgtacatgaataacggcaacagcccc
ctgagaagtcgcacatccagcatggacctgcagaacccttcgagcccattgtttcgctgt
tcctcgtctccgcaatcttccaccatggtccgctccagtacacacctatcactgcccaag
gaaagactaaggccgtcaccgtctcttcctctgggtgtgtgtgccagagacagggagagg
ccttcctccttggtttccccatcatcaccgactccctccacctcatccttctctatggac
tccctgttaaccccaactctggatatcttcaagagcagcgtcatctcggcagggaagggc
gtggctgagaaggcgagtcgcctctactctcgcctgtcatctcagacgtcattgacgcag
gacaccaattccgaccgtgtgagtgtttcctcgttgacctcggcagatgcagaatgcacc
tcgctgcttgataatgactcctgtctggacccagatggctttacgtccccgcagcacggc
aacacgacccgggtcaggagaagccctgttgcatctcatcacacaaacctgagcagccct
gtcaaccccaacagagtgttcagacacaactccttctctggtggtttggcacttccctct
aaagctcctcacactccagattcctcccccgatggcagccgtttccagctcattcctaat
tacatcatagaggtgctgatgtccagctgttcgctttgtaaaacatgtgactgcctggtg
tacgatgaggagatcatgtcaggctggacagcaaatgactccaacctcaacagcacttgt
cccttctgcggcacagccttcctgcctttcctcaacgtagaaattaaagatctacgacca
caaaacagatcttctacaggaagtaatcctgttaaagaggagggcgtgactgttaaagag
gggagcaaaatgtctgcgacagacgatgctgctgagccgtctgcagctcccccgaaggaa
cccgagagcagcaggagcgctggcaaggctgcaccggcgtccctcccaacatctgcctct
gacctggtgacggtgccgtacctgagtccgctggttctgtggaaggagctggagagcctg
ctggtgaatgagggcgaccaggccctctcctgcccaagtgttgtcgaccaacaccccata
gtcttctggaacctcatgtggtacttcagaaggctggagctgcccagtaacctgccggcc
ctcattctggcgtcccaacactgcagccgtggagatcagactcctcaaaatgtttcatct
gaagacagtaagcaggtgcttgtgaggatcatgtgggacaacccaaagttgcaccaagac
aaagttcaaccatgctacatcctgtggaacactcactgtgccaactccttggttcgctct
gggctgtgtgaagaaggccagctcttcaccgtggagcttctgcagggctttgtgaggggc
attaagaagagtgacgtctatcagcctatgagtcagatcattcagctgctggggcctgag
ttgggttttaagaggcagaggagcctctacagagatttattgttccttactctagtcgct
ttggggaaaaacaacataaatatcaacgcgttcgaccgggagtacaggctggcctacgac
cgcctcacccccggccaggtcaaactgactcacaactgtgaccggccccccggagcagga
gtgatggagtgccggaggacttttggagagcccagtttgtga
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integrated database retrieval system