Cololabis saira (Pacific saury): 133444209
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Entry
133444209 CDS
T09849
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133444209 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133444209 (neil1)
Enzymes [BR:
csai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133444209 (neil1)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133444209 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
PA26
Motif
Other DBs
NCBI-GeneID:
133444209
NCBI-ProteinID:
XP_061577781
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All DBs
Position
5:34954347..34957420
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AA seq
445 aa
AA seq
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MPEGPELHLASLFVNKVSDGVVFSGPVRKSEVSKSPDVPFTCEAYRITATSRGKEVKLTL
TPIKSDEPEKRTKSGQAEQPMDIVFRFGMSGFFRFTGEDDLPKHAHLRFYTKETPCRVLS
FVDARRFGGWQPDGTWQPDRGPCIMFEYKSFRDNILSHISDRAFDRPICEVLLNQKYFNG
IGNYLRAEILYRLNIPPFVSAREVLEGLESDDLLENEKPLKNEIADAKTSEKVQKKMKQE
EGDLIRLCHTVPLEVIGLGGKGYDPEKADYSAFKAWLRCYYVDGMKSIRDHNGRTMWFTV
SKVNFIVNLCQTMYRTCTNIHCSGFQGDPGSMAPKNSKSPKPKKRAKKEDDDHDYTTKTK
VSRSRSDGARKKVVKQESETKTKKKEKTVHPKEAPSGRSKTKKKQEENTQQRKTRASTRR
RESSSAEPATGLQGRSGRGSRKGGK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggaccagagctccacctggccagcctgtttgtgaacaaggtgagtgatgga
gttgtgtttagtgggccggtcaggaaatccgaggtcagcaaaagtcctgatgtgcccttc
acttgtgaggcatatcgcatcactgccacctccagagggaaggaagtgaagctcacactg
acgcccatcaagagtgatgagcccgaaaagaggacaaaatcaggacaggcggaacagccc
atggacatagtctttcgctttgggatgtcgggctttttccgcttcactggagaggatgat
cttcccaaacatgcccatctgcggttttataccaaagagacgccctgcagagtgctcagt
tttgtggatgcacgcaggtttggcggctggcagcccgatggaacatggcagcctgacaga
gggccttgcatcatgtttgagtacaaaagcttcagggacaacattttgtcacacatatcc
gaccgtgcctttgaccggccaatttgtgaagtcctgctgaatcaaaagtacttcaacggt
attgggaactacctgagagctgaaatactttacaggttaaacatcccaccgtttgtttct
gcccgggaggtcctggaaggccttgagtcagacgatttgctcgagaatgagaaacctctg
aagaatgagattgcagacgccaagacttcagagaaggttcaaaagaaaatgaaacaagag
gaaggtgacctgatccggctttgtcacacagtacccctggaagtgatcggcctaggtggt
aagggctatgatcctgagaaggcagattactctgcatttaaggcgtggctgcggtgttac
tacgtagatggaatgaaatctatcagggaccacaatggcagaactatgtggtttacggtg
agtaaagtaaactttattgtaaatctttgtcagacaatgtaccgtacttgcactaatatc
cactgctctggttttcagggagatccaggctccatggcacccaaaaattcaaagtcaccc
aaaccaaaaaagagagccaaaaaagaagacgacgaccatgactacacaaccaagacaaag
gtttccagaagtcggtctgacggcgcgaggaagaaggtagtcaaacaggaaagtgagacc
aaaacaaagaagaaagaaaagaccgtacatccgaaggaagctccttcagggagaagcaag
actaagaagaaacaggaagaaaacacacagcaacgtaaaacaagagcaagcacacgtagg
cgggaaagcagcagcgcggagccagcgacaggtctacagggacgaagtgggagagggagc
aggaagggcggcaaataa
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