Cololabis saira (Pacific saury): 133444314
Help
Entry
133444314 CDS
T09849
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
csai
Cololabis saira (Pacific saury)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PDZ_6
PDZ
SH3_2
SH3_9
FERM_f0
Motif
Other DBs
NCBI-GeneID:
133444314
NCBI-ProteinID:
XP_061577977
LinkDB
All DBs
Position
5:complement(39487379..39671401)
Genome browser
AA seq
1917 aa
AA seq
DB search
MPLRPAAGKHEPPSSPRQDQQQHTHTHSHTLTNPYTHAANGSQGASTDSSSSREEDSSVP
VPHTVLAFRPGAERSNSARTPMEEPTGNTVVIRIGIPDLQQTKCLKFNVDAPIWLSKQRI
LCTLNQSLKDVLNYGLFQPAYNGKAGKFLDEERQLREYPFPSIAPVPYLEFRYKRRVYTQ
TYLDEKQLSKLHTKANLKKFMDYVQQRNIEKLSRFLEKGLDPNFHDPDTGECPLTHAAQL
EGCAELIKVLRSGGAHLDFRTKDGITALHKAVRSKNHTALITLLDLGASPDYKDSRGLTP
LYHSSMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRYGHVQHLEHLLFYGADMSAQ
NASGNTALHVCALYNQDSCARVLLFRGANKEIKNYNSQTAFQVAIIAGNFDLAEIIKVHK
ASDVVPFRETPSYTNRRRVSTGPLPSPRSLLRSASDNNLNGDHDHLHAPPPREARGRQGP
SPVPSLRSLPAFGQQHCSLGESRHPEVPDSSLQSTGSSRSSHSRSPSLRHMHEEDKPVPR
RSQSHGYPYGYGPRGRLSPGSVQRDPSPPHHTPPALTGPRGPKRKLYSAVPGRTFIVVKP
YSPQGDGEIQLNRGERVKDYDCNDVEVTNGCLDVNADAPSSADVGDNADFDDEYDEHEVL
SIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDPRLETREDRNKRLFRHYTVGSYDNFAS
YRKVVHGSPGCGSRSSVFPCDYIIEEKNAVLHKKENEGFGFVLRGAKAETPIEEFTPTPA
FPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGSRLLMKVVS
VTRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRKRGVLAHFLLSERL
DEMLASQESMLRSQPAEVDYRAATVKQRPTSRRITPAEISSLFERQGMTLHGGLHPGIER
GHIPLPKGMSRTKSFGATEEDRLSALAGEHRFPRSSSMTDSLRDHSQPHPIPPPPQTAPP
PPPYYLDTGPPPAFCPPPPPSRTQSQGHEPGGRSSFKPSSLDLPYEAAQRQATQIERQKK
ARSMIILQDSSHQPVEPTEIPRPSAATPPERIKRRGRVIDNPYANVGQFSIGLYTPTKPQ
RKKSPLVKQLQVEDAQEKASLALAAAHSRESSPSGRHPHTHGHTHTSRADYYQQQLMAER
ERLRGEIMFQGKGPFAAAIAGAVKDRERRLEERRKSTVFLSVGTMEGTSATGSDAPSLTQ
SHSIDERMLTRELGQLPPPALALSPSPSGTTFIHPLTGKPLDPNSPLALALAARERALTS
QSQSPTSSPEPRTKQERVGQGVMFTDTQTKESPHGDGAATPPFSPKSAKATGYEVGSSPA
SVLAPQPTKTPWASSPSPVSFRQEMEARIEERREEKGLEEKKSMLISIVDTSQQKTAGLI
MVHATSNGQAIAVAPELEQTPVPTSTEPSKSQSPRAKSPSPTVPPPQPQPQTQRPASPAQ
AKSLAQGSSEEDVDPYTVTLPPAMLSSSDEETREDLRKIGVVPPPDEFANGLLSETQAAS
PAKPSTAPTTPATPTSQTPSTPTTPTVTPSQPQPQPPQPPPPPSAAAVSGKPSDPLEPPP
VGESGSAADSGVEEADTRSSSERERDYHLETTSTVSTVSSMSTLSSESGEPADTHTTHTS
YADGQTFVLDKPPVPPKPRLKSQVGGGKGPVTFRDPLLKQSSDSELLSQQQAAALAAAAA
GGHGLPAGGSASVTGLAPTKPRYLFQRRSKLWGDPVEPRGPGVGLGIGSLGNLGGLGLGL
GVDESTKPSVMGELSSRLQQLNKDTRSLGEEPLGSSLDPGRKSPVAGARTACAPRRAGRL
YFSAAWVSSTPFLREVMEPRTPSAPEAATPSPAAPLAPAQVHLIGATPSDDTQASAC
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccacccagctctccacggcaggaccag
caacagcacacacacacacactcacacacactcacaaacccttacacacacgcagcaaac
ggcagtcagggggccagcactgacagcagcagctcccgagaagaggacagcagtgttccc
gttcctcacactgtcctggctttccgtcccggtgcagagcgtagcaacagtgcaagaaca
cccatggaggaaccaacaggcaatactgtggtcatccgcatcggaatcccagacctgcaa
cagacgaaatgtttgaaattcaacgtggatgccccaatctggctgtccaagcagcggatc
ctatgtactctcaaccagagcctgaaggatgtactcaactacggccttttccaaccagct
tacaacggcaaagctggcaagtttctggatgaggagagacagctgagggaataccccttc
ccatctatcgctcctgtaccttacctggagttccgctacaaaagacgtgtctacactcag
acgtacctggatgaaaagcaattgtctaagctccacactaaggcaaacctgaaaaagttt
atggattatgtgcaacagaggaacattgaaaagctctcgaggttcctggaaaaaggtctg
gaccctaacttccatgatccagacacaggagagtgtccactaacgcacgcagcacagctg
gaaggatgtgcagagctcatcaaagtgctgagaagtggaggggcacatctggacttcaga
acaaaggatggcatcactgccctgcacaaggctgtgcgcagcaagaaccacacagcactc
attacactgctggacctgggtgcatcacctgactataaagacagcagggggttgacacct
ctgtaccacagttcgatggtaggaggagacccgtactgctgtgagctgctgctgcatgat
cacgcacaggtcggctgtgtggatgagaatggctggcaggagatacaccaggcatgtcgc
tatggccacgtgcagcatttggagcatctgctattctatggagctgacatgagtgcccag
aatgcatctggaaacaccgccctgcatgtgtgtgccctctacaatcaggatagctgtgcc
cgtgtcctcctgttccggggagccaacaaagagataaaaaactacaacagccagactgct
tttcaggtggcgattatagctggaaactttgatcttgcagaaatcattaaggtccacaaa
gcatcagatgttgtgcctttcagggagaccccctcctacaccaaccgtcgacgtgtgtca
actggccccctgccctcaccgcgttccttgctccgttctgcgagtgacaacaacctgaat
ggcgaccatgaccatctccacgcgcctccccccagagaagcgcggggccgccagggcccg
tctcctgtcccctcgctgcgcagcctcccagcgtttggtcaacagcactgcagccttggg
gaaagtcgtcacccagaggttcctgacagcagtcttcagagcactggcagctccagatct
tcccattcccggtcaccatcactacgtcacatgcacgaagaagataaaccagtccccaga
aggtcccagagccacgggtacccctacggatacggccctcgtggaaggctgagccccggc
tcagtgcagcgagacccaagcccacctcatcacacccctccagcactgacaggccctcgt
gggcccaaacgaaaactctacagtgctgtcccaggacgtaccttcattgtggtcaagccg
tattcgccgcagggagacggagaaatccaactcaaccgaggagagcgagtcaaagactat
gactgtaatgacgtagaagtaacaaatggctgtctggatgtaaatgctgacgccccgagc
agtgcggacgttggcgataatgctgactttgatgatgaatatgatgaacatgaagtgctg
agtataggggaaggaggtttctgggaaggcacggtcaaagggcggacaggctggttccca
gcagactgcgtggaagaagttcagatgaggcagtatgacccacggctagagactcgagag
gaccgcaataagagactgttcaggcactacaccgtgggatcttacgacaactttgcctca
tacagaaaggttgttcacgggtctcctggttgcggcagcaggagctctgttttcccttgt
gactacatcatagaggagaagaatgctgttttacacaagaaagaaaacgaggggtttggc
tttgtcctgcggggagccaaagccgagacacccattgaagagttcacccccaccccggcg
tttcctgccctgcagtatctggagtctgtggatgtggagggagtggcctggagggctggt
cttaggacaggagacttcctcattgaggtaaacggggtgaatgtggtgaaggtgggccat
aagcaggtggtgtctttgatccggcaagggggcagcaggctgctgatgaaggtcgtttct
gtcacacgtaaacctgagtctgaagaagttgttcgaaagaaagctcccccaccacctaag
agagctcccagcaccaccctgactctgcgctccaagtccatgactgctgagctggaggaa
ctggcttctgcacggaggaaaagaggagttctggctcattttcttctatcagagagacta
gatgagatgttggcatcgcaggagtctatgttgcgttctcagcccgcagaggtagattac
agagcagccactgtcaaacaacggcctaccagcaggagaataacaccagcagagattagc
tcactgtttgagcgacaaggaatgactctacacggaggtctacatccagggatcgagaga
ggtcacattccacttccgaagggcatgtccaggaccaagtctttcggtgccacggaggag
gatcgactgtctgcccttgcaggcgagcacagatttccacgcagttcctccatgacagac
agccttagagaccactcacagccccatcccatccctccgcctccacaaacggcccctcct
cctcctccttactaccttgacactggtccccccccagcattctgcccccctcctccccca
tctaggacccagagtcagggccacgagcccggcggacgttccagctttaaaccctcctcc
ttggacctgccttatgaggctgctcagcggcaggccacgcaaattgagaggcagaagaag
gcccgctccatgatcatcctgcaagactcctcccatcaacctgttgaacccacagagatt
ccccgtccttctgctgctaccccacctgagcgaatcaaaagaagggggagggttattgac
aacccttatgcaaacgtgggtcagttcagcattggactgtacacacccaccaagccacaa
aggaaaaaaagtcccctggtgaaacaactacaggtagaagatgcacaagaaaaagctagt
ttggccttagctgctgcccactcgcgagagagctcaccctcaggacgacacccacatacc
cacgggcacacacacaccagccgtgcagactactaccagcagcagttgatggctgagcga
gagcgcttgcgtggagagataatgtttcagggtaagggcccgtttgctgctgcgatcgcc
ggagcggtgaaggatcgtgagcgtcgcctagaagaacggaggaaatccactgtcttcctt
tctgttgggaccatggaggggacatctgcaaccggctccgatgccccctccctgactcag
tctcattccatcgatgaacggatgctgacccgggagctgggacagcttcctccccctgcc
ttggctctgagcccctcacctagtgggaccacctttatccatccactcacaggaaagcct
ctcgacccaaattcaccactggctcttgcgctggccgcaagggagagggcgctcacttct
cagagtcagtctccgactagcagcccagagcctcggactaaacaagagcgagtaggccag
ggtgtgatgttcactgacactcagaccaaagagtctccacacggggatggtgcagcaact
ccccctttttcaccgaaaagcgccaaggcaacggggtacgaagttggatcctcccctgca
tctgtgttagcccctcagcccaccaaaacaccgtgggcctcatcgccatcgcccgtatca
tttcgccaagagatggaggctagaattgaggaaaggagggaagaaaagggtctagaagag
aaaaaaagtatgttgatcagcattgtggatacgtcgcagcagaagacagcagggctaatc
atggtccatgctaccagtaatgggcaggccatcgcggtggctccagaacttgaacagaca
cctgtgcctacatccacggagcccagcaaatcccagagtccccgggctaaatctcccagc
cccaccgtgcccccgcctcagcctcagccgcaaactcagcgtccagccagtccggcccaa
gccaagagtctggctcagggaagctcagaagaggacgtggatccgtacacagtcaccctg
ccccctgccatgttatcctccagcgacgaggaaacgcgggaggacctacgaaagatcgga
gtggttcctccaccagatgagtttgcgaatggactgctgtcggaaacacaggcggcgtcc
ccggctaaaccttccaccgctcccaccacccccgcaacaccgacatcgcaaactccctca
actccgacaaccccgaccgtgactccctcccagcctcagcctcagcctccccagcccccg
cctccacccagtgcagcggccgtctcagggaagccctccgaccctctagagcccccgcca
gtgggcgaatccggctctgcggctgactcgggcgtggaggaggccgacacgcgcagctcc
agcgagagagagcgagattaccatctcgagaccaccagcaccgtctcaaccgtttccagc
atgtccacgttgtcctcggaaagcggcgagcccgccgacacacacaccacgcacacctcc
tatgccgacgggcagactttcgtgctcgacaagccgccagtgcctcctaagccccggctc
aagtcccaagtgggaggcggcaaaggcccggtcactttcagggaccctctgctgaagcag
agctccgacagtgagctactatcgcagcaacaggccgccgccctggccgccgctgcagct
ggaggacatgggctccccgccggcggatccgcttctgtgactggtttggcccccaccaag
ccacgctacctcttccagcgcaggtccaagctgtggggggacccggtggagccccgagga
cctggggtggggctcggtattgggagtttgggcaatctcggtggacttggacttggactc
ggtgtggacgagagtacaaaaccgtctgttatgggagagctcagttcacgtctacagcag
ctaaataaagacacaaggtcactgggggaggagccgctgggatcatcactcgacccgggg
aggaaatcacccgtggcaggtgccagaactgcctgtgcgcccaggagggcaggacgactg
tacttttcagcagcttgggtgagctccacaccatttctcagagaagttatggaaccacgt
acaccatccgccccggaggccgctaccccatcacccgccgcacccctagccccggctcag
gttcacctgatcggggcgaccccctcggacgatactcaggcttcggcctgctga
DBGET
integrated database retrieval system
