Cololabis saira (Pacific saury): 133444329
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Entry
133444329 CDS
T09849
Symbol
prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133444329 (prpf18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133444329 (prpf18)
Spliceosome [BR:
csai03041
]
Complex C
Other components
Step II factors
133444329 (prpf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
133444329
NCBI-ProteinID:
XP_061578020
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All DBs
Position
5:39933333..39943661
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AA seq
351 aa
AA seq
DB search
MDILKAEIERKRKHIEEKQILDDSKKYFKRADLARKEQEDYFRRCGYKVQRETPESQRVE
EEKEENEPSTSTNPVLELELTEKLPMTLSRQEVIRRLRERGEPVRIFAESDYDAFQRLRK
IEILTPEVNKGLRNDLKAAMDKIDQQYLNEIVGGTEPGEVDTQHDLKVHEENTTIEELEA
LGKTLGTGDDHRDQDVIDKFLRFLLGVWAKDLNSREDHVKRSVQGKVASATHSQTESYLR
PLFRKLRKKNLPADIKESITDIIKFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHAR
TGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQKHFQTVPSKCVEYNAL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacatactcaaagctgagatcgaaaggaagaggaagcatatcgaggaaaaacagatt
ttagacgactccaaaaaatattttaaaagggccgaccttgcacgcaaggagcaagaagac
tacttcagaagatgtggatataaggttcagagagagactcctgagagccagagggttgag
gaggagaaagaagaaaatgaaccatccacttcaactaatccagtattagaactggagcta
acagagaagctgccaatgacactgtcgcgacaggaggttattcgacgtcttcgggaacga
ggggaaccagtcagaatatttgcagagtctgactatgatgcctttcagagactcaggaaa
atagaaatactgactcctgaagtaaacaagggcttgaggaatgacctgaaagcagccatg
gacaagattgaccagcagtacctgaacgagattgttggagggacagagccgggggaggtg
gacacacagcatgacctgaaagttcatgaagaaaataccactattgaagagcttgaggct
cttgggaaaaccctgggcacaggggatgatcacagagaccaggacgttattgacaaattt
ttaaggtttcttcttggggtttgggccaaagatctgaacagcagagaagaccatgtgaag
cgcagcgttcagggcaaggtggccagtgcaacacactcgcagaccgagtcttatctcagg
cctctctttcgaaagctcaggaagaagaatttacctgctgacatcaaagagtcgatcaca
gacatcatcaagtttatgttggagagggaatatgtgaaggcaaatgatgcatatctacaa
atggctatcggaaatgccccctggcctattggtgtcaccatggtgggtatccacgcccgt
actggacgagaaaagatcttctccaaacacgtggcccatgttctcaacgatgagacgcag
aggaaatacatccagggactgaagagactgatgacaatctgccagaaacactttcaaacg
gttccatcgaagtgtgtggagtacaacgctctttaa
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