Cololabis saira (Pacific saury): 133444371
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Entry
133444371 CDS
T09849
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133444371 (ppfibp1b)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133444371 (ppfibp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
Motif
Other DBs
NCBI-GeneID:
133444371
NCBI-ProteinID:
XP_061578096
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Position
5:complement(40957008..40984077)
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AA seq
980 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGLFDCQSPTSPYMGNLRALHLLEDLRSVLE
LMDTEERESLRCQIPDSTAESLVEWLHSHLSNGHISMGGSDHYQERLSRIESDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLDEHREKLNATEEMLQQELLCRTALETQKLELMSEVSNL
KLKHNAMDKDRRDFTDDRFRDSEDLILEISELRYRVTEMESEKLQYEKKLKSTKSLMAKL
SSLKIKMGQMQYEKQRKEYKLLAMKEELAILRRELEGRDGEMRSADPTERVSHPDETLRK
RLKEKHVEVQRMKKAVESLMAANEEKDRKIEELKQSLLRYKKVQDMVMSVQGKKEKTKDN
ERTESPGEGSSVCLSASPISLESEMQDLTDVDQTKRKSPDEMESFSGQSEEPSPTPSPSD
PEQAPESTPTDVESHDATRTEGQDHLDENSNGKHTNEETSKTNEKPPMAPSATPPASTED
DSFGSKKARSSFGKGFLKIRGGKKTTSGPNLDRSRSASAPMLAETEQQGTDHLDLAGLPQ
RSSNNDSTHTLATTPESRKKSKGIKKLFGKLIRSQSTTFNLDDNLQEGEFKRGGVRATAG
PRLGWSRDLQRVNNDVDAPFARWTKDQVCDWLHEQGLGLYVNMARVWISSGQTLLQASQQ
DLERELGIKHTLHKKKLQLALQALGSEEEDIKGKLDYNWVTRWLDDIGLPQYKTQFDEGR
VDGRMLHYMTVDDLLSMKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDESSISPAEV
SQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVEAMALLLNIPPNKTLLRR
HLATHFNLLIGSEAQQLKQECLENPDYILLTATTKVKPKKLPFSSFGNLRKKKQEENEEY
VCPMDVEMPKGRSFQKGYELQIYEDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDD
EFFNASNSPNPSVTDDDSNV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagcgacatgttggctgctgccctggagcaaatggatggtataata
gcaggctcaaaggccttggactactccaatggtttgtttgactgtcagtcacctacgtcc
ccttacatgggcaacttgcgggcgctccaccttttggaagacctgaggagtgtcctggag
ttgatggacacagaggaaagagagagtctacgctgccagatccctgactccacagccgag
agtctggttgagtggctccacagtcacctgtccaatgggcacatctctatgggtggaagt
gatcattaccaggaacggctttccagaatagagagcgataaggagtctctggtgcttcag
gtaagcgtgctcactgaccaggtggaggctcagggagaaaaaattcgagatttggacttg
tgtttggatgagcacagggagaaactcaacgccactgaggagatgctgcaacaggagctt
ttgtgcagaactgcgctggagacccagaagctggaactaatgtctgaagtatccaatctg
aagctgaagcacaatgctatggacaaggacagacgggactttacagatgacagatttagg
gacagtgaggacttgattcttgaaattagtgaactgcggtacagagtgactgaaatggag
agtgaaaaactacagtacgaaaagaaacttaaatcaacaaagtcgctaatggccaagctt
tctagcctgaaaattaaaatgggccagatgcagtatgagaaacagaggaaagagtacaaa
ctcctggctatgaaggaagagctagccatactccggagggagctggagggcagagatgga
gagatgaggagtgcagatcccacagaaagagtttctcatccagatgaaactcttagaaag
aggctgaaagaaaaacatgtggaagtgcaaagaatgaaaaaggcagtagagtcgttgatg
gcagcaaatgaggaaaaggatcgaaagattgaggaactaaagcagtcacttctgcggtac
aagaaagtccaagacatggtgatgtctgtgcaagggaagaaagaaaaaacgaaagataat
gaacgcaccgagagccctggcgaaggatccagcgtgtgcctgtctgccagccccatctct
ctggaatctgaaatgcaagaccttacagatgtcgaccaaacgaaaaggaagagcccagat
gagatggagagtttcagcggacagagtgaggagccttcacctactcccagtccgtctgac
ccggagcaagcgcccgagtccacaccaacagacgtggaaagtcatgacgccaccagaact
gagggccaggaccatttggatgagaacagtaatgggaagcatacaaatgaagagaccagt
aagaccaatgaaaagccacccatggctccctctgccaccccgcctgcatccacagaagac
gacagctttggttcaaaaaaggctcgctcgtcttttgggaagggcttcttaaagatccgc
ggaggcaagaagacaaccagcggccctaacctcgaccgcagcaggagtgcaagtgcgcct
atgctagctgaaacagagcaacagggcactgaccatctggatctagctgggctgccgcag
agatcatccaacaatgacagcactcacactcttgctacaacgccagaaagtagaaagaaa
tccaaagggataaaaaagctatttggaaagcttataaggagccagtcaaccacatttaac
ctggatgacaacctgcaggagggtgagtttaagcgtggtggggtgcgtgccacagcagga
cccagactgggttggtcccgggacctacaacgagtcaacaatgatgtggacgctcccttt
gcacgttggacaaaggatcaggtctgtgactggctgcatgagcagggtctcggcctttat
gtgaacatggcccgtgtgtggatctcctccggacagactctgctacaagcttcacagcaa
gaccttgagagggagctgggcatcaaacacacgttacacaaaaagaagctgcagctggct
ctgcaggccctcggctcagaggaggaggatattaagggaaaattggattacaactgggta
acaaggtggctggatgatatcggcctgcctcagtataagacacagtttgatgagggcaga
gtagatggacgcatgctgcactacatgacggtggatgacctgctttctatgaaggtggga
agcgtcctacatcacctcagtatcaaaagggctattcaagttctgcgactcaacaactac
gagcctaattgtttgcgccgcagaccatcagatgagagctctatttcacctgcagaggtt
tcccagtggaccaaccacagggtgatggagtggctgcgatccgtagatctggccgagtac
gctcccaacctgagaggcagcggggtccatggaggcctcatggtcctggagccgcgcttc
aatgtggaggccatggctctgctgctgaacatcccccccaacaagactctgctgcgacgc
caccttgccacgcacttcaacctgctcatcggctcagaggcccagcagctcaaacaggag
tgtcttgagaacccagactacattttgcttaccgccaccacaaaagtcaagccaaagaaa
ctgccattcagtagttttgggaatctgaggaagaagaagcaggaggagaatgaggagtac
gtgtgtcccatggacgtggagatgccaaagggacgaagcttccagaaaggctacgagctc
cagatctatgaagatgacctggacaggctagaacagatggaggactccgaggggacagtg
agacagatcggggctttctctgaaggaattcaaaacctgacgagtatgctgaaagatgat
gaattcttcaatgcttccaattcaccaaatccgagtgtaacagatgacgactccaacgta
tga
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