Cololabis saira (Pacific saury): 133444415
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Entry
133444415 CDS
T09849
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04260
Cardiac muscle contraction
csai04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133444415
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133444415
04261 Adrenergic signaling in cardiomyocytes
133444415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133444415
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133444415
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA_2
VWA
dCache_1
CobT_C
ArsR
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
133444415
NCBI-ProteinID:
XP_061578173
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Position
5:complement(42439268..42520594)
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AA seq
1092 aa
AA seq
DB search
MRKLLRILAFFFLWVMAESQMKIPPETVQQWASVFSVQLRELSTKYSGSLLLQKKLKDVE
SIIKIVELNGDDLVIDYSDEIERMLGSKMKSVKRLAESAEDSDLYHEFNASLEFDYYNSM
LINTMDDDGNSVELGGEFSLEENEHFNNLPVNTQQSNIQVPTNVYNKDPNILNAIYNSEA
LNDVYISNFLKDPTLTWQYFGSSFGFFRIYPGIKWTPDTNGVVAFDCRNRNWYIQAATSP
KDIIIMVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRYVEPCFRGTLVQ
ADLDNREHFKLLVEELHVKGEAKIKNAMKESFKILNEARLKGQGSMCNQAIMLITDGAME
DYESVFEEFNWPDRRVRVFTYLIGREMTFSQNTKWIACNNKGYYTHISTLADVQENVMEY
LHVLSRPMVINHDHDIIWTEAYMDTVLPNTKELFTTKAQSLLLMTSVAMPVFSKKKETLS
HGILLGVVGTDIPLMEVMKLAPRYMLGPHGYAFLLNNNGYILAHPDLRPLYKDGKKLKPK
PNYNSVDLAEVEWEDIDELLRTAMVKGETGSISLDIRASVDKGKRPMYLVNNYFYTNIDE
TPFSFGMALTRGHGSLMFMGNVSVEEGLHDLTSPDLSIATEWTYCETDIDPAHRKYTQIQ
AVIRYLQGKEPDLECDEVLLQQTLFDAVVTAPLEAYWNALMLNDRLEPGVETAFLGTRSG
LMRIIRYAGTESRVAKKFLTPSDKDNLFTIDHFPLWYRLAVENTAGQFYYYPINDKGVKY
VIATTAARVSSGGKTAMAGAIGVQLSLDLLEKRFWAIAKQPSDTDCSTIEGVCPLSCESA
DLNCFLVDNNGFILLSKERNEVGRFFGEVDGSIMASLIKMGMFKKVSLFDYQAMCKNSHH
HASSARPLLSPFYVIVALIRWIFSNALMFLLDFNFCGLWHSDYFVDAKAGYHTSHKQKKV
EALQPCDTAYPSFMYDPSIREANSLIKCGRCQKMFVVQQIPDSNLVLVVTQAYCDCSRQY
GPILLDPKEIKYIATVKCNRMKSQKVRRRPESCHAYHPKEDATDCGGASAIFLSLFVFPA
SLLVSLVHLCWP
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaactcttgaggattctggcatttttcttcctgtgggttatggcagagagtcag
atgaagatcccaccagagacggtgcagcagtgggcatcagtgttctctgttcagcttcga
gaattgtcaaccaaatactctggctctctgttgctgcagaagaaactcaaggatgtggaa
tccatcattaagattgtggagctcaacggagatgatttagtaattgactactctgatgaa
attgaacgaatgttgggaagtaagatgaagtctgtgaagaggttagcggagtcggctgag
gattctgacctgtaccatgaattcaacgcttcactagagtttgattactacaattccatg
ctgatcaacacaatggatgacgatgggaactctgtggaactgggtggagagttttctctt
gaagagaatgaacatttcaacaacttgcctgtgaacactcagcagagcaacatccaggtt
cccaccaacgtttacaacaaagatcctaacatactcaatgccatctacaactctgaggct
ttaaatgacgtctacatcagcaacttcctgaaggatcccacgctcacctggcagtacttt
ggcagttcctttggcttttttaggatatatcctggtattaaatggacaccagacaccaac
ggtgtggttgcttttgactgcaggaaccgaaattggtacatccaggcagctacgtctcca
aaggacatcatcatcatggtggatatcagtggcagcatgaagggcttgaagatgaccata
gctaagcacaccatcaacaccatcctggacacgctgggagagaacgactttgtcaacgtc
attgcttacactgactatgttcgttacgtggagccgtgcttcaggggaactctggtccag
gctgacttggacaacagagagcatttcaagctgttggtggaggaactgcatgtcaaagga
gaagcaaaaatcaagaatgccatgaaggaatccttcaagatcctaaatgaggcgaggctg
aaaggtcaaggcagcatgtgcaaccaggccatcatgctgatcacggatggagccatggag
gactacgagtctgtctttgaagaattcaactggcctgatcgccgggtgcgggtgttcacc
tacctgattggtagagagatgaccttctctcaaaacaccaaatggattgcttgcaacaac
aaaggttattatacacacatttcaaccctggctgatgttcaggagaacgtcatggagtat
ttacatgtgctgagccggccgatggtcattaaccacgaccatgacatcatctggaccgaa
gcctacatggatactgtgcttcccaacacaaaagagcttttcaccaccaaggctcagagt
ctactgctgatgacgtcagtggccatgccagtctttagcaagaagaaagagacgctgtct
catgggatcctgcttggtgttgttggaactgacatcccactcatggaggtgatgaagttg
gctcccagatacatgctgggaccacacggctatgccttcctcctcaacaacaatggttat
attttggctcatcctgatctgcgacctctgtataaagatggcaagaaactgaagccgaag
ccaaactacaacagtgtggatctggctgaagtggagtgggaagatatagatgaactgctg
aggacagccatggtgaaaggagagacaggcagcatctctctggacatcagggcgtctgtg
gacaaaggaaaaaggccgatgtacctcgtcaacaactatttctacacaaacattgatgaa
acgcccttcagttttggcatggcgctaacaagaggtcatgggagcttgatgttcatggga
aatgtatctgtggaagaagggctgcatgatctaacatctccagatcttagcattgctact
gagtggacatactgtgaaacggacattgatcctgctcaccgaaaatacacccagattcaa
gccgttatccggtacctgcaaggaaaggaacctgatcttgaatgtgacgaggtgttatta
caacagaccctgtttgacgccgtggtaacagctccacttgaagcctattggaatgccttg
atgcttaatgacaggctggagccaggggtggagacggcgttccttggtacacgttctggc
ctcatgaggatcatcagatatgcaggaactgagtcgagggtggcaaagaagttcctgact
ccatctgataaagacaacctgttcaccattgatcacttccccctgtggtaccgtctggct
gtggaaaacactgctggacaattttattactatccaattaacgacaaaggagtcaagtat
gtcattgcaacaacagcagcgagggtatcgtctgggggaaaaacagcaatggctggagcc
atcggggtgcagctgtccttggatttgctggaaaagaggttctgggccatcgccaagcag
cccagtgacaccgattgttcaaccattgaaggtgtatgtcctctcagctgcgagagtgct
gatcttaattgtttcttggttgacaacaatggcttcattttgctgtctaaagagagaaac
gaggttggtcggttctttggtgaggtggatggatccatcatggcgtcactgatcaagatg
ggaatgttcaaaaaagtctcactgtttgactaccaagctatgtgcaaaaatagccaccat
catgccagcagtgcacgacctttgctcagtccattctatgtgattgtggccttgattaga
tggatcttctccaacgctctgatgttccttctggacttcaacttctgtggcctctggcac
tctgattatttcgtggatgccaaagctggctatcacacatctcataagcaaaagaaggtg
gaagcacttcagccctgcgacaccgcgtaccccagcttcatgtatgatccatccatcaga
gaagccaacagcctcatcaagtgtggacgctgccaaaagatgtttgtggtgcagcagatt
cctgatagcaatttggttctagttgtgactcaggcgtactgtgactgctctcgtcaatat
ggacccatcctgctggaccccaaagagatcaaatatatcgccacagtgaagtgcaacagg
atgaaatcccagaaggtgcggcgacgtccagaatcctgccacgcctaccacccaaaggaa
gacgctacggattgtggtggagcttcagccatattcctgtcactcttcgtgttccctgct
tctctgctcgtctcattggttcatctctgctggccataa
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