Cololabis saira (Pacific saury): 133444462
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Entry
133444462 CDS
T09849
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133444462 (nlrc5)
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133444462 (nlrc5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NLRC3
LRR_TMOD-LMOD
LRR_MHP1-HER1-GIP3
NACHT
LRR_6
LRR_CARMIL
LRR_NLRC4
NLRC4_HD2
HTH_NLRC5
LRR_4
WHD_NOD2
Atypical_Card
AAA_30
LRR_8
AAA_22
AAA_31
WHD_NACHT_C
AAA_16
Phytochelatin
ABC_tran
AAA_25
Motif
Other DBs
NCBI-GeneID:
133444462
NCBI-ProteinID:
XP_061578252
LinkDB
All DBs
Position
5:45385563..45434946
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AA seq
1941 aa
AA seq
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MDLGADPDESAKDVLSQESSELLHILSEQSPSVIMSLGRMVPRELLKENQQAPTSPAAAS
VTDIEIMLKYFQTSADAGACCRFLQSVCMVCENIPMRLESRLMSVAGHACNVLLNPASED
TVGSDTGCSDICTPNTADMKPLTPPSEEQLVKRPRIDHWEQYITEVTSSLQRRWKRVTAG
LVKEVQLEKVWVSIRNPSRSRDRPDQTPGSASRASRTQDPDVDYGCFESRSTLETFLQGC
TGKVTVLVGQAGSGKTLLMSCLGQQWAKGLGPIPSSYLFVLLEFRQLNLLSCPLSLSQLL
FQHYLPPNGGNHAKQAILDYLLSNPEQSCWVLDGYDEFHRKISGQAAGSEPLDVRTPVPV
ADLISGLLNGQLLPGSTVLVTCRVRDAVDLDGLSDKVGQLLEWDHNEMKEYVDNFFGVKD
GIVGAKAADLLLSSRHLLAMSSVPGLCSICCICLEHLLLRGQEAGCTRVLDKRGDKTKKS
TQETKEKEGEEEEDSRGKSRAQKVEQSGMREVSQDTTTTDTSDRAKLSPTFGQVPTTLSQ
VYLTVVAAFLSRYPNQGGQYCRPASPPSTVGALSILSHYQSELRELSRMAWRGLEESKIL
FEEEDIPRHVLELSIKTGLFSQVELRRHDGALVNAYCFVHLTVQEFLAAFRTMTSTDVSD
EQLKRRFSLKTRWTTKSDQKSVFTDSLYLYVCGLASPQCTSALVQVARISGLKGVQSWVQ
KRQALVLNLLEGLCHSTSLTGPKLLQLCHCIQESQDHKLAKLFVSVRPTLELRNIWLLPN
DIDALAFVINSRGNNSIGLDFGACSMELECLDALPRCQYIHHLSFRGRRYGDNFAEKLSS
ILPEFTTLRKLEFCGASLSATGAASLASGLQNCPEIAEINLIDNNLQDEGIRHIAEIVTK
LQNLVSVTMGQNNTSLKAMDYLIEKMSSCLNIQHVHADGMKKVSVTFSQTLDNSDKSDSE
PMVSLVNQKWSKFEMKNLVRTLAGCPALSVLDLSGAEWDEETFRTLAEFVPKFRITKKII
LNDIYSSVECLVALTALLSDCLVTELSIRLQKPVQISVTFPGRQEKPASEMSKKLCLSCC
NLLPADLERVWRSLGTASGLTVFDLSCNRLGDKGLKKLLNILPHLSKIQEINASNNGISM
SGMIPLAIALCSHGSLMEIHLSCGVKDQLTLLFGPEESNGKQKIKMFRINNSRLFPNDVS
KVCRRLSQCRFHFELEFSHCSFANNATENLVKLLPKMLSLQKLNVSSSVASTTDALELVR
SLADNQRVTLVDLSPQNESVINFGEGANQASCRLTHFCFNVGQMERLLEILQQSQHLHYL
DLSGNQLEDTAFKCLVDSLQRLKISSYINLSNNMLTQQGLFCITSTLVNCINVSAVEVSG
RLGEDQRCLIWFRQNGSCEKTLSVREFSLERDDLVRLAEIVSSCPSMAKLEFSNNSLQSE
WIEDLVKVLRPNLRGYTVSIEECWIRAEKAVHLLCRCLELNSHIQNIRIHQTTLYLSVMK
TAALTSVSGAAEPPAQSVATNIGLVDCAVTGNQLASLWSVIQHCPSLTELDFSYITLGTD
GAEMICSFLPLLPKLTSLSVAVKESTLSMVEEILQEVLQSGSIKCLNLSGHTISDTAAHN
MTRLLPRLRSLNLSHCVWSLTGGLELLQTLQRCHTLEDLCLDSVQLNEESQACLAHALRN
IKSVQSLKLNETVRVAGGSEADRRLDLLAAMEGITQMKEIQLGCWRLSDGGVQQLSRLLW
NWTQLRTLCLSKNLIGDESGVKLLDALKRCSHLEELNLSSNRLGDLTAARMALVLPSLTH
LAVLDISENRIGPEGSVHLSEAIMSLKSLTKFHLTSVGNSQLNTVAASLLHCPIIQDLGL
GWNNCGDDVVLELAGVLPFCHKLTRIDLECNSVSVSGVDALVRAMRSCPGLHVVRLWRNK
VSQNEAQRLCLREKRLNFSST
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atggatctgggggctgaccctgatgaaagtgcgaaagatgtattgtcccaggaatcctca
gaactgttacacatcctttcagaacagtcaccgtcagtcataatgtcgcttggccgaatg
gtgcccagagaacttctgaaggaaaaccagcaggcccccacaagccccgcggctgcatcc
gtcacagacattgaaatcatgttgaagtacttccaaacaagcgcagatgcgggggcatgc
tgcaggtttcttcagagtgtttgtatggtgtgtgaaaatattcccatgcgtctggagtcg
aggctcatgtcagtggctgggcatgcatgcaatgtcttactgaatccagcctcagaagac
acagttgggagcgacacaggttgttctgacatttgcactccaaacacagcggacatgaag
ccattaacaccaccgtcagaggagcaacttgtaaaacgcccgcggattgatcactgggag
cagtatatcaccgaagtgacgagttccctgcaaaggaggtggaaacgagtgacagcaggg
ctggtgaaggaggtgcagctggagaaagtgtgggtcagcattagaaatcccagcagaagc
agggacagacccgatcagaccccggggtcagcaagcagagcaagcaggacgcaagatcct
gatgtggattacggctgttttgagtccagatcgactttggagaccttcctgcagggatgt
acaggaaaagtgaccgttcttgtgggccaggctggatcaggaaaaactctgctcatgtcc
tgtttaggacaacagtgggcaaaggggctaggccctatcccttcatcctacctatttgtt
ctgctggagtttcggcagctcaacctgctgtcctgccctctctccctgtcccagctgctg
ttccagcactacctccccccaaacgggggcaaccatgcaaagcaggcaattttagactac
ctcctttctaatccagagcaaagctgttgggtactggatggctacgacgagtttcacagg
aaaatcagtgggcaagctgcggggagcgaaccgctggatgtgagaacacctgttccagtt
gctgacctcatctcagggttgttgaatggtcaacttctgccaggaagcactgtactggtc
acctgccgcgtacgtgatgccgtagacttagacggcttgtcggacaaagtcgggcagctg
ctggaatgggaccacaatgaaatgaaggaatatgtggacaacttctttggcgtgaaagac
ggaattgttggagcaaaagctgctgatctcctcctctccagtcgacacctcctcgccatg
tcctctgttcccggcctctgcagcatctgctgcatctgtctggagcatttactgctgcga
ggccaagaggcaggatgcacacgggtgctggacaaaagaggagacaagacaaagaaaagc
acccaagaaacaaaagaaaaagaaggagaagaggaagaggacagcagaggaaagagtcgt
gcacaaaaagtcgaacagagtggaatgagagaagtcagccaagacacgacaactactgat
actagtgacagagccaaattatctcccacatttggccaagttcccacaacgcttagccag
gtttatctaacagttgttgccgcatttctcagccgttatcctaatcaaggaggccaatat
tgcaggccagcgtctcctccgagtactgtgggtgcactgagcattctgagtcattaccaa
tctgagttgcgtgagttgagtcgcatggcatggagaggcttagaggagagcaagatcctc
tttgaggaagaagacattccacggcatgttttagagttatccatcaagacaggtctcttc
tcacaggtggagctcagacgtcacgatggggcccttgtcaacgcctactgcttcgtccat
ctcactgtgcaggagttcctggctgcatttagaaccatgacaagcactgacgttagtgat
gaacagcttaagaggagatttagtctgaaaactcgctggacaactaaatcagaccagaag
tcggtgtttaccgactccctgtatctatacgtctgtggcctggcctctccacagtgcacc
tcagcccttgttcaagtagccagaatttctggtttgaaaggagtccaaagttgggttcag
aaacgccaagcccttgttctgaatctacttgaaggactatgccacagcaccagtctgact
gggccaaagctgttgcaactttgccactgcatccaggaaagccaggatcacaaactggca
aagctgtttgtcagtgtgagacccaccctggaactgcgcaacatctggcttctaccaaat
gacatagatgctctggcctttgtaattaactcgagaggtaataacagcattggtttggac
tttggcgcatgctcaatggagttggagtgcttagatgccctgcccagatgtcagtacatt
catcacctcagttttcgtggacggaggtatggtgacaactttgcagagaagttgtcttct
atactacctgaattcacaacactaagaaaactagagttttgtggtgctagtctgtctgct
acaggagcagcgagtttggcttccggtctgcagaactgtccagaaatcgctgagatcaat
cttattgacaacaatctccaagatgaaggaatcaggcacatagctgagattgttaccaaa
ctgcaaaacctggtgtctgtaacgatgggacaaaacaacacctctcttaaagcaatggac
tatctcattgagaaaatgtcttcatgtctgaacatccaacatgttcatgcagatgggatg
aaaaaagtgtcagtaacattttctcaaacattagataacagcgataaatccgattctgag
ccaatggtcagcttggtgaatcagaagtggagcaagtttgagatgaaaaacctggtcagg
actctggcgggctgcccggcactgtctgtactggatctctctggagctgaatgggatgaa
gaaactttcagaactctggctgagtttgtgccaaaattcaggatcaccaaaaaaatcatc
ttaaatgacatctactcatctgtggagtgccttgtggctttgactgctctgctgtcagac
tgtcttgtgacggagctgagtatcagattgcagaaacctgtacagatttctgtaacattc
cctggacggcaagaaaaacctgcaagtgaaatgtctaaaaaactctgtctcagctgctgt
aatctgcttcctgctgacctggaaagagtttggagaagtttgggaactgcctctggtctc
actgtgtttgacttgtcctgtaaccgtttgggtgacaaaggcttgaagaagctattgaac
atcctgcctcatttaagcaaaatccaggaaatcaatgccagcaacaatggcatcagcatg
agtgggatgattcctctggccattgcgttatgttcccatggcagcttaatggaaattcac
ctcagttgtggcgttaaagaccagctgactctgctgttcggccctgaagaaagtaatgga
aagcagaagataaagatgttcagaataaacaacagcaggctctttccaaatgatgtgtcc
aaagtgtgcagaagattgagccagtgccgcttccattttgagttagagttttcacactgc
tcatttgctaacaatgcaactgagaatctggtcaagctgttgccaaagatgttgtcactt
caaaaactcaatgtcagcagcagcgttgcttccaccactgatgcgctggaactggtcagg
tctttggcggacaatcagagagtcacattggttgatctcagtccacagaacgaatctgtc
attaactttggagaaggagcaaaccaagccagctgcaggttgacacacttttgctttaat
gtgggccaaatggagagactacttgagatcctgcagcagagccagcatttgcattacctt
gatttatcaggtaatcaactggaggatacagctttcaagtgtttggtggattctttgcaa
aggcttaaaataagcagctatatcaatctcagcaacaacatgctgacccagcaggggctg
ttttgcatcaccagtacactggttaactgcatcaatgtgtctgctgtggaagtcagtggt
agattgggagaagatcagagatgcctcatctggttcagacagaatggaagttgtgaaaaa
actctgagtgtcagagaattcagtctggagcgtgatgatctggtcagattagcagagatc
gtgtccagctgtcccagcatggccaaactggagttctcaaacaattcactgcagtcagag
tggattgaggatttagtgaaggtcttgagacccaatctgagaggatacactgtaagtatt
gaagagtgttggatcagagctgagaaagctgtgcatttgctgtgtcgctgtttggagctc
aatagccacattcaaaatatcaggattcaccagaccacgctctacctgtctgtgatgaag
accgctgcactgacctcagtcagtggtgccgcagaacctccagctcagtcagtggccaca
aacataggccttgttgattgtgctgtaactggaaaccaacttgcatcactgtggagcgtc
atccaacactgtccttcactgacagagctggatttttcctacatcacactgggtacagat
ggagcagaaatgatctgctcctttctacccttgttgccaaagctcacttctctcagtgtt
gcagtcaaagagagtacgctgtcaatggtggaggagatattacaagaagtcctgcagtct
ggatccatcaaatgcttaaacctgtcaggtcacaccatcagtgacacagcagctcacaat
atgaccaggttgctgccccgccttcgatcacttaatctgtcccattgtgtgtggtcgttg
actggagggctggagctcctccagacactgcagcggtgccacactttggaagatctttgc
ctggactctgtgcagctgaatgaagagagccaggcgtgtttggcacatgcactgaggaac
atcaagtccgtacaaagtctcaagctgaacgagactgtcagagtagcgggggggtcagag
gctgaccggaggctggatctcctggctgccatggaaggaatcacacagatgaaagagatt
caattgggctgctggagactttctgatggaggggtgcaacaactgagcagactcctttgg
aactggacacagctcaggacactctgtctctcaaagaatctcattggtgatgaatctgga
gtgaagctgcttgatgctttgaagcgttgtagccacttggaggagctcaacttatcgagc
aatcgtcttggtgacctcaccgccgccaggatggccctcgttctaccatcactaacccac
ctcgctgtcttagatatttcagaaaaccgtattggacctgaagggtcggttcatctgtct
gaagcaataatgagcttaaagagcctcaccaagtttcatctgacctctgttgggaactca
caactaaatactgttgctgccagtttgctccactgtcccatcatacaagatctgggtctg
ggatggaacaactgcggtgatgatgtggtgctggagctggccggagttctgcctttctgc
cataaactgactcgaatagatctggagtgtaacagtgtgagtgtgagtggagtggatgcc
ctggttagagcaatgaggtcctgccctggtctccacgtcgtcaggttgtggaggaataaa
gtttcacagaatgaagctcagaggctttgtttgagggagaagaggttgaatttttcatcc
acctaa
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