Cololabis saira (Pacific saury): 133444464
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Entry
133444464 CDS
T09849
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133444464 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133444464 (lamb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
F5_F8_type_C
DUF948
Motif
Other DBs
NCBI-GeneID:
133444464
NCBI-ProteinID:
XP_061578256
LinkDB
All DBs
Position
5:complement(45835891..45899897)
Genome browser
AA seq
1774 aa
AA seq
DB search
MILPFLIFFIPAVRLQDPQRTQDQCDGISCNPQLGDLMIGRAAQLSTSSTCGLRGPQQYC
ILGFLEEEKKCFICDSQQPYDRYDNLNSHRIENIISTFDPERKTRWWQSENGVHRVSIQL
DLEAVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFAEDCALHFPSVPRESADKI
DDVVCDSRYSGSQPSTGGEVVLKALDPVFEIENPYARNIQDLITVTNIRVNFTRLFTLGD
TLLSRRRRNPQDKYYYSLYNMVVQGSCFCNGHASQCVSSDGGRGDVFTQQVHGRCVCQHN
TAGANCERCADFYQDSPWWPGGQNTANICRRCNCNGHSDSCHFDAARYAATGGVSGGVCD
DCQHDRMGPQCERCRQGLYRDPRRAPDDPEACKPCDCDPAGSHGGGQCDALSGACFCKEN
VEGERCDRCKPRFFGLSEDDPAGCQECKCHQPGSIGSCDQITGECECAPFASKPLCDRCL
PGYWGLGTINRCLPCDCDIGGAHDNRCSPEEGQCHCLPNMVGRRCSEPASGYFLPSLDYF
LYEAERAAPLFGKRRPRSPPAASLVNPLVSPPCEQNFTRQGPDFNVSDGQVILQRTRRQS
RRRKPEQPKTIPLDPGHALQIIPRKRWPGQPVTWTGLGLVRVFAGAGLLFTVDNLPVSKD
YQLIIHYEPEFPSDWLATINIKMLSPGDGGCPTNPTESKNLVLPGNTRASILDSPVCLNA
GGRYSAEIRFHKQLTSNSSYILVDSMGLIPSIESAQDFCSKSDLDSSRDFHCTGLALESG
SQESLPEVCEGIINGLSARIHNGAVACRCNAIGSLGKACSKLGGICDCKPNVIGRCCDTC
APLTFGFGPEGCKRCRCEPEGSVSKSCDQISGQCACRSEVSGRRCDRCKTGFWGFPACRP
CECNGLSETCDGETGVCLDCRKHSTGPHCDRCVDGYHGNPVSRQPCQPCLCPDLRTSERF
FATSCDHQSLSLTCKCLEGHTGTRCERCSPGFYGDLTLPRARCKPCPCNDNTDPDDHDAC
DGTTGECLRCLHNTAGPHCENCKPGYYGNALRQTCKECSCDRRGTQVTQCPLDSPCFCNP
RTGQCPCRRGVVGDLCDECEDGYWNLDGASGCQPCKCDPTNSLSNVCNKVTGQCPCRAEF
GGKQCDECGKNHFGNPDLQCISCGCNLEGTADPSCDSETGECFCRTGVTGSLCDECAPGY
ESTFPECKECHPCISLWIKNITDVQRAAEKMETLIVDRGDSLEPKDSRHEQQVEEMQSKL
NSLAGLTGLSLPKVEKMEKLFLKMIKLKDAIDTNKILINPSLLVNTEIDNIQLEFKKLLN
NLRAKLTDSNDKEKEKTEELLEKIGELNKSFMADEKRVKNSKKAVEDSMDTRQEAKAKLS
TCSSKGGSAPLEKKINELSAGKLNKTVCGEDCSRCGGTQGPKCDGVVSVSQNASQTAEES
TKQLKELPSRLEESMKKIEDAKQLAQDTRDKARDVQERISNNTESYEREKNKTKELIQRV
KLYLADESVPPEDIERIVNAVLRIQLPRSTDEIRSMLNDINNLLSNSTPFKNNQNDLVDE
AKTVQKLLQEAQDLKARTKDLNVEDINRNLIDADEAQNKANDHLETAFNDKTMAQRLIQE
VEAKVDNIEAQLRNQSKDLMKNIDAVKKKTQDNREMAREARQSADSALRDTADTQAELVD
VVKQFEDLNQKYLNQTLDQGDAAERIKKILKEAEDIKRQVEDKLRQLQDVETKIKQLLER
KKQKTTEVSELMETVDSLRKDIAARAETYATCTS
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcccctttctcatcttttttattccagcggtgagactccaggatccccagagg
acccaggaccagtgcgatggaatttcctgtaacccccagctgggtgatctgatgatcgga
cgagcagcacagctgtcaacgtcatctacgtgtggtctgcgtggaccccagcagtactgc
atcctcggattcctggaggaggaaaagaaatgtttcatctgtgactctcaacaaccatac
gatcgctatgacaacctcaacagccaccgcattgaaaacatcatctcaacttttgaccct
gaaagaaaaacaaggtggtggcaatctgaaaatggagttcatcgagtcagcatccagtta
gatctggaagctgtgttccaattcagtcacctcgtcctcaccttcaagagttttcgacca
gcagccatgttagtggagcgatcaaaggattttggaagaagttggaaggtttttcgttat
tttgcagaagattgtgcgcttcattttccttcagttccacgtgagtcggctgacaagatt
gatgacgtggtctgtgatagcagatactctggatcccaaccgtccactggtggagaggtg
gtcctgaaagctctggatcctgtttttgaaatagaaaacccatacgcacgaaacattcaa
gatctgatcaccgtgacaaatatccgggtgaacttcacccgtctcttcacactcggtgat
actcttctgtctcggagacgccggaaccctcaggataagtattactactcgctttacaac
atggtggttcaaggaagctgcttctgcaacggacacgccagccagtgtgtgtcttcggat
ggaggaagaggggacgtcttcacccagcaggttcatggccgatgtgtttgtcagcataac
acggctggagcaaactgtgaaagatgtgcagacttttatcaggactccccctggtggccc
ggaggacaaaacacagccaacatctgcaggaggtgtaactgtaacggccactcagactcg
tgccactttgatgcagcccggtatgcagccacgggcggtgtgagtggcggtgtgtgtgac
gactgtcagcatgacaggatggggcctcagtgtgaacgctgccgccagggtctgtaccgg
gatccacggagagctccggacgaccccgaggcctgcaaaccctgtgactgtgacccggct
ggttctcatggcggtggccagtgtgacgcactgagtggagcttgtttctgcaaggaaaac
gtggagggtgaacgctgtgatcgctgcaagccccgcttctttggtttgagcgaggacgac
ccggctggttgtcaagagtgcaagtgtcatcagccgggaagtatcgggtcatgtgatcaa
ataacaggagaatgtgaatgtgcgcccttcgctagtaaaccactgtgtgatcggtgtttg
ccaggttactggggtttaggaaccatcaacagatgtttaccatgtgactgtgacatcggt
ggagctcatgacaatcggtgttcaccagaggaaggacagtgtcactgtttacccaacatg
gttggccggcgctgctctgaaccggcctccggatacttcctgccttcactggactacttc
ctgtatgaagctgagcgtgctgccccgctgtttggaaaaagacgcccccgttctccacct
gctgcttctctggtgaatccactagtttcacctccttgtgagcaaaacttcacacgccag
ggccctgacttcaacgtctccgacggacaagtcattttacaaaggactcgtcgacaaagc
cgccgcaggaaaccggagcagccgaaaaccattcctctggacccgggtcacgctctgcag
attattcccagaaagagatggcctggtcagccggtgacgtggacaggcctgggattggtc
agagtgtttgcaggggcagggcttttatttactgtggacaacctccccgtatcaaaggac
taccagctcatcatccactacgaaccagagtttccttctgattggttggcaacaataaac
ataaaaatgctgtcaccgggtgatggaggctgccccactaatccaacagagagtaaaaat
ctggttcttcctggaaataccagagcaagtattctggactctcccgtgtgtctgaatgca
ggaggaagatattctgcggagatccgcttccacaaacagctcacgtccaacagctcatac
atcctggttgactctatgggcctaattcctagcattgagtcagctcaagatttctgctcc
aagagtgaccttgactcttcccgtgactttcactgtactggtttggctttagagtctgga
tctcaggagtctctaccagaagtctgtgagggaattattaacggtctgtcagcaagaatc
cacaatggagccgtcgcctgcaggtgcaacgccattggctcccttggaaaggcctgcagt
aagctgggcgggatctgtgactgtaaacccaatgtaattggccgttgctgtgatacctgt
gcaccactaacgtttggatttggacctgaaggatgtaaacgatgtaggtgtgaacctgaa
ggctctgtatcgaaatcgtgtgatcagatcagtggtcagtgtgcgtgtcgctcagaggta
tccggccgtcgctgtgatcgctgtaagacggggttctggggattccccgcctgtcgaccc
tgtgaatgcaacggactgtcggagacgtgtgatggagagacgggagtgtgtctggactgc
aggaagcactcgactgggccacactgcgacaggtgtgtggatggttaccatggtaaccca
gtctccagacaaccctgtcagccctgcctctgtccggatcttcggaccagtgagcgattc
tttgccacttcttgtgaccatcagtccttgagtctgacctgtaaatgcctggagggccac
acagggacacgctgtgaaagatgcagccctggtttctatggggatctgacgttgccacgc
gcccgctgtaagccatgtccatgcaacgacaacactgacccagacgatcatgatgcatgt
gacggcacaactggagaatgtttgcgctgccttcacaacacagcaggaccccactgtgaa
aactgcaaacctggttactatggcaatgccttgcgacagacctgcaaagaatgctcttgt
gacaggcgaggaacccaggtgacccaatgtcctctagatagtccctgcttttgcaatcca
agaacgggccagtgtccgtgccggaggggagtggtgggagacctgtgtgacgagtgtgag
gacggatactggaacctggacggggcatcgggatgccaaccctgcaaatgtgatcctacc
aactccctctctaacgtctgtaacaaggtgaccggacagtgtccatgtcgtgctgagttt
ggaggaaaacagtgcgatgaatgtggaaaaaatcattttgggaatccagacctgcagtgt
atctcttgtggctgtaacctggaaggaacagcggatccatcgtgtgactctgaaacgggc
gagtgtttctgccggactggagtcacgggtagtctctgtgatgagtgtgcccccggctat
gagtcaacatttccagaatgtaaagaatgccatccgtgcatcagcctttggatcaaaaac
atcactgatgtccaacgagctgcagagaagatggaaacattaattgttgaccgtggcgat
agcctggagcccaaagacagccgccacgagcagcaggttgaggagatgcagtcgaagctg
aatagccttgccggcctcacaggtctctcactaccaaaggtggagaagatggaaaaattg
ttcctgaagatgattaaattgaaagatgccattgatactaataagatcctgatcaatcca
tctttactcgtcaacactgaaattgacaacattcagttggagtttaagaagctgctgaac
aacttaagagccaaactcacagactcaaacgataaagaaaaagagaaaactgaagagttg
ctggaaaaaataggagagctcaacaaatccttcatggcagatgagaaaagggtaaaaaac
tccaaaaaagctgtagaagactccatggataccagacaggaggccaaggccaaacttagc
acatgcagtagcaaaggaggctcggcaccacttgaaaagaagatcaacgagctcagtgca
ggcaaactcaacaagacggtttgtggagaggactgttcaagatgtggtgggacacaaggt
cctaagtgtgatggagttgtctctgtcagtcagaacgcttcacaaacagcagaggaatca
acgaagcaactcaaggaactcccctcaagactggaggagtccatgaagaagatcgaagat
gccaaacagctggctcaggacaccagagataaagccagggatgtgcaggagcggatcagc
aacaacactgaatcctatgagagggagaaaaacaagaccaaggagctcatccaacgagtc
aaactctaccttgctgatgaaagtgttcctccagaggacattgagagaattgtcaacgct
gtcctgaggatccagttaccacgctcaactgatgagatccgctcaatgctcaatgacatc
aataatctgctgagcaattctactccattcaagaataatcagaatgacctggtggatgaa
gccaaaactgtccagaagctcctgcaggaagctcaagatctaaaggcacggactaaagac
cttaacgttgaagacatcaacagaaacttgattgatgcagatgaagctcagaacaaagcc
aacgaccacttagagacagccttcaacgacaaaaccatggcccaaagactaatccaagag
gttgaggccaaagtggacaacattgaggcgcagctgaggaatcagtctaaagatctgatg
aaaaacattgatgctgtaaaaaagaaaactcaggacaacagagagatggccagagaggcc
agacagagtgcagattctgctttaagggacactgcagacacacaggcggagctcgttgat
gtagtgaagcagtttgaggatttaaatcaaaaatacttgaatcagaccttggatcagggt
gacgctgcagaacgtataaagaagatcttaaaggaggcagaagacataaagagacaagtg
gaagacaaactcagacagctacaagatgttgagacgaagataaaacagctgcttgagagg
aagaaacaaaagacaactgaagtgtccgagttgatggagacagtggattcactccgaaag
gacattgccgctcgagctgaaacatacgccacttgtacctcataa
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integrated database retrieval system