Cololabis saira (Pacific saury): 133444508
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Entry
133444508 CDS
T09849
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133444508 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133444508 (exosc6)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133444508 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133444508
NCBI-ProteinID:
XP_061578330
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Position
5:50851052..50854008
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AA seq
275 aa
AA seq
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MPTDTKRVRGPDVSRSPGVFALSPADAAPPAAGSRPDGRQRDQVDVRPVFVRCGPVSQAE
GSAYMEAGGTKLLCCVYGPRETERRDDTDMTRGRLTTDMRFAPFSCPERGSWIQGSQDKD
FSLMLQESLQPAVRLQKYPRSQIEVNVMVLENSGSVLAHAITCASLALADAGIEMYDVVL
GCSMHQDGASFVVDPTYVEENSHISGSGDNQGGLTVAFLPSLNQISGLQSDGEMAEETLT
AGIRTCIEGCYKLYPVIQQALVKAVRKAAPPPSES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgatactaagcgcgtccgcgggcccgacgtgtcccgtagcccgggcgtgttc
gcgctcagccccgcggacgccgctccgccggcggccggcagcaggccggacgggcggcag
cgggaccaggtggacgtgcggccggtgttcgtgcgctgcgggccggtgagccaggccgag
ggctcggcctacatggaggccggcggaaccaagctgctgtgctgcgtttacggaccccgg
gagacggagcgcagggacgacaccgacatgacccgcggaaggctgaccaccgacatgcgc
ttcgctccgttctcctgcccagagaggggctcctggatccagggcagccaggacaaggat
ttctctctgatgttacaggagagtctgcagccggccgtgcgcctgcagaaatacccccgc
tctcagatcgaggtcaacgtgatggtgctggagaacagcggctcggttctggctcacgcc
atcacgtgcgcctctctcgctctcgcagacgcggggattgaaatgtacgatgtggtgctg
ggatgctccatgcaccaggacggcgcctccttcgtggtggaccccacttacgtggaggag
aacagtcacatctctggcagcggcgacaaccagggtggactgaccgtcgcgttccttccg
agtctgaatcagatttcagggctgcagtcggacggagaaatggccgaggagactctgacg
gcagggattcggacctgcattgagggttgctataaactgtacccagtgatccaacaagcc
ctggtcaaggctgtgcgcaaggctgctcccccaccgtcagagagctga
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