KEGG   Cololabis saira (Pacific saury): 133444508
Entry
133444508         CDS       T09849                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    133444508 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133444508 (exosc6)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     133444508 (exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 133444508
NCBI-ProteinID: XP_061578330
LinkDB
Position
5:50851052..50854008
AA seq 275 aa
MPTDTKRVRGPDVSRSPGVFALSPADAAPPAAGSRPDGRQRDQVDVRPVFVRCGPVSQAE
GSAYMEAGGTKLLCCVYGPRETERRDDTDMTRGRLTTDMRFAPFSCPERGSWIQGSQDKD
FSLMLQESLQPAVRLQKYPRSQIEVNVMVLENSGSVLAHAITCASLALADAGIEMYDVVL
GCSMHQDGASFVVDPTYVEENSHISGSGDNQGGLTVAFLPSLNQISGLQSDGEMAEETLT
AGIRTCIEGCYKLYPVIQQALVKAVRKAAPPPSES
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgaccgatactaagcgcgtccgcgggcccgacgtgtcccgtagcccgggcgtgttc
gcgctcagccccgcggacgccgctccgccggcggccggcagcaggccggacgggcggcag
cgggaccaggtggacgtgcggccggtgttcgtgcgctgcgggccggtgagccaggccgag
ggctcggcctacatggaggccggcggaaccaagctgctgtgctgcgtttacggaccccgg
gagacggagcgcagggacgacaccgacatgacccgcggaaggctgaccaccgacatgcgc
ttcgctccgttctcctgcccagagaggggctcctggatccagggcagccaggacaaggat
ttctctctgatgttacaggagagtctgcagccggccgtgcgcctgcagaaatacccccgc
tctcagatcgaggtcaacgtgatggtgctggagaacagcggctcggttctggctcacgcc
atcacgtgcgcctctctcgctctcgcagacgcggggattgaaatgtacgatgtggtgctg
ggatgctccatgcaccaggacggcgcctccttcgtggtggaccccacttacgtggaggag
aacagtcacatctctggcagcggcgacaaccagggtggactgaccgtcgcgttccttccg
agtctgaatcagatttcagggctgcagtcggacggagaaatggccgaggagactctgacg
gcagggattcggacctgcattgagggttgctataaactgtacccagtgatccaacaagcc
ctggtcaaggctgtgcgcaaggctgctcccccaccgtcagagagctga

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