Cololabis saira (Pacific saury): 133444511
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Entry
133444511 CDS
T09849
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
csai04137
Mitophagy - animal
csai04144
Endocytosis
csai04340
Hedgehog signaling pathway
csai04350
TGF-beta signaling pathway
csai04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133444511
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133444511
04350 TGF-beta signaling pathway
133444511
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133444511
04137 Mitophagy - animal
133444511
09144 Cellular community - eukaryotes
04520 Adherens junction
133444511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133444511
04121 Ubiquitin system [BR:
csai04121
]
133444511
03029 Mitochondrial biogenesis [BR:
csai03029
]
133444511
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133444511
Membrane trafficking [BR:
csai04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133444511
Autophagy
Mitophagy
Other mitophagy associated proteins
133444511
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
HECT type E3
133444511
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133444511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
133444511
NCBI-ProteinID:
XP_061578339
LinkDB
All DBs
Position
1:complement(37990231..38063770)
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWDRPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAVASGPPGEQRVQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNNPSPNGSRVAMDSQNTNL
SHPTPLKDQGGPGAPQQAVSPAQLPEEAECLTVPKYKRDLVQKLKILRQELAQHQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIP
VTEETKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKI
DIVDWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANTNNLPKAHTCFNRIDIPSYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagttcggagaaatggcccagtgaagctgcggttgacagtcctgtgt
gcaaagaacctggcaaagaaagacttctttcggttgccagatccctttgccaaagtggtc
gtggatggttcaggacaatgccactctacagatactgtgagaaatacgcttgaccccaag
tggaatcaacattatgatctttacattggaaagtcagattccattaccatcagcgtgtgg
aaccacaagaagatccacaaaaagcagggtgcaggtttcctaggttgtgtccgccttctc
tccaatgccatcaacagactcaaagacacaggctatcagagactagatctgaataagctg
ggcccaaatgacaatgacactgtgagaggacagatagtagtgagtctacaatccagagat
cgcattggcaccggcggaccggtggtagactgcagtcgtctttttgacaatgacctacct
gatggctgggaagaaaggaggacagcttctggaagaatacagtacctgaaccacatcacg
cgaaccacacagtgggatcgacccaccagacccgcatcagagtattccagcccatcaggg
cgtccgctgagctgtgtggttgatgagaacacaccggtgatgacgcctgtgaatggggct
gtggccagtggccctccgggtgaacagcgtgtacaggagagacgggttcgatcacagcgg
catcggaactacatgagtcgaacacacctgcatacgccgcctgacctgccagagggctat
gagcaaagaacaacccagcagggccaggtctacttcctccatacgcagactggagtcagc
acttggcatgacccgcgggtacccagggatttgagtaacgtaaactgtgaagagctgggc
ccgttgccaccaggctgggagatcagaaacactgctacaggccgtgtctactttgttgat
cacaacaatcgtacaacgcagttcaccgacccacggctatctgctaacctacatctagtg
ctcaacaacccgagtccgaatggttcccgtgtggccatggacagccaaaacactaacctc
agccatccaactccattgaaggaccagggtggtcctggggctcctcagcaagccgtgtcc
ccggcccagttacccgaagaggcagagtgcctgacggtgcccaaatacaaaagagacctg
gtgcagaagctgaagatcctgcgacaagagcttgcacagcaccaaccacaggctggccac
tgccgcatcgaggtcagccgggaggagatctttgaggagtcgtaccgacaggtgatgaag
atgcgcccaaaagatctttggaaaagactaatgatcaaattcagaggagaagagggactg
gactatggaggggttgcaagggaatggttatatctgctgtcacacgagatgctgaacccc
tactacggcctcttccagtactccagggacgacatctacacgctacagattaatcccgac
tctgctgtcaatcctgagcacctgtcgtacttccattttgtgggtcgaattatgggcatg
gcggtgtttcacggccactacatcgacggaggcttcaccctgcctttctacaaacagctg
ctggggaaaccgatcacgctggacgacatggagtctgtggaccccgacctccacaacagt
ctggtctggattctggacaatgacatcactggcgtcctggaccacaccttttgtgtggag
cacaacgcttacggagaaatcatcccacatgaactcaagcccaatgggaagagcatccct
gtgacagaggagaccaagaaggagtacgtcaggttgtatgtgaactggcgtttccttcat
ggcatcgaggctcagtttctggccctgcagaaaggcttcaacgaggtcatcccgcagcac
ctgctcaaatcctttgatgaaaaggagttggagctgatcgtgtgcggcctgggaaagatt
gatattgtggactggaagtccaacacgcgtctgaagcactgcacccctgacagcaacatc
gtcaagtggttttggaaagccgtggagtcatttgacgaggagaggagggcccgcttactg
cagtttgttactggctcgtctagagtcccgctgcaaggctttaaggctttacagggcgct
gcaggacccagactcttcaccattcatcagatcgatgccaacaccaataatctgcccaaa
gcccatacctgtttcaatcggatcgacattccttcgtacgaaagctatgacaagctatac
gacaagctactgacggcaatcgaggagacgtgcgggtttgcagtggagtga
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