Cololabis saira (Pacific saury): 133444659
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Entry
133444659 CDS
T09849
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03020
RNA polymerase
csai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133444659 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
133444659 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133444659 (polr2c)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133444659 (polr2c)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
133444659 (polr2c)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
133444659 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
133444659
NCBI-ProteinID:
XP_061578512
LinkDB
All DBs
Position
5:22873666..22879439
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPIIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCEDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGYGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFYYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgacggtgaagattactgaactcacggacgaaaatgtgaag
tttgtcattgaaaacacggatttggcagttgccaattctatccgccgtgtcttcatgtcc
gaagtcccaataatagcgattgactggatccagattgatgccaattcctcagtcctgcac
gatgagttcatcgcacacagagttggtctcatccccctcaccagtgatgacatcgtggat
aaaatgcaatattccagggactgcacctgtgaggatttctgtccggagtgctccgtggag
ctgacccttgatgtccgatgcactgaagatcagacgcgtcacgtgacttccagagatctg
ttgtccaacaatcccagagtcattccggtgacgtcgcggagccgagacaacgatccaaac
gactatgtcgagcaagatgacatcttgctggtgaagcttcgcaaaggtcaggagcttcgg
ctccgagcgtacgcaaagaaaggctacggtaaggagcacgccaagtggaacccgaccgca
ggagtctcctttgagtacgacccggacaacgcactgaggcacacggtctatccacgacct
gaggagtggccgaagagcgaatattcagagatagaagaggatgaggttcaggccccttac
gatcccaatggaaagccagaaaggttctattacaacgtggagtcgtgcggttctcttcga
cccgagaccatcgtcatgtcagcgttggccgtcctcaagaagaaactaagtgacttgcag
acccagttgagccacgagatccagagcgacgtactcaccatcaactaa
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