Cololabis saira (Pacific saury): 133444672
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Entry
133444672 CDS
T09849
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133444672 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133444672 (nup93)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133444672 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
133444672
NCBI-ProteinID:
XP_061578524
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All DBs
Position
5:23743245..23779609
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVTTPGRSALDS
VEVAYGRQIYIFNEKIVNGHIQPNLGDLCASVAESLDDKNVSDMWLLVKQMTDVLLVPAK
DTLKSRTSVEMQMAFVRQGLNFLENSYKNYTMVTVFGNLHQAHLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEIEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKSWFQEYMNSP
DRRLSPTSENKLRLHYRRVLRNSADPYKRAVYCMIGKCDITDNHGEVADKTEDYLWLKLN
QVCFDDNDSSAPQDRLTLPQLQKQLLEDYGESHFSARQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDNQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIISKVALEAENKGLFEEAVRLYELARNPDKVLELMNKLLSPVIAQVSAPQSN
KERLKNTAVAIAERYRSQGLAGEKSVDSTFYLLLDLMTFFDEYHAGQVDRAYDVMERLKL
LPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGTPAGTPGRPQRTIE
DSDVQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaaggttttggtgagctgctgcagcaggcagaacagcttgcggctgagaca
gaagctgtgtctgagttgccacatgttgagaggaaccttcaggagatccagcaagctgga
gagagacttcgatctcgcaccctgacccgcacatcccaagatgcagcagatgtaaaagcg
tcaatcctccttggttcaagaggtttggacatctttcatatttctcagaggctggaaagt
ctaagtgctgctaccacctttgagcccctagagccagtcaaagacacggacatacagggc
ttcctgaagaacgagagggacaacgccctcctgtcagccatcgaagagtctcgccgcagg
acttttctgttggctgaagagtaccatcgtgagtccatgctggttcaatgggagcaggtg
aagcagagagtgctgcacactttactcggagccggagaagatgctctggacttcagccaa
gatgttgagccaagctttgtgagtgaagtgaccactccagggaggagtgcgttggacagc
gtggaggtggcctatggacgacagatctacattttcaatgagaagatagtcaatgggcat
attcaacctaatctgggagatttatgtgcgtctgtcgcagaaagcctggatgacaagaac
gtatctgacatgtggctgttggtgaagcagatgacagatgtgttgttggttccagctaaa
gacaccctcaagagtcgcacttcagttgaaatgcagatggcttttgtacgccaggggctc
aacttcctggagaacagctataaaaactacaccatggtgaccgtctttgggaacctccat
caggcccatctgggaggcgtgccgggaacataccagttagtccgcagcttcctcaacatc
aaacttccagggcctttacctggcatgcaggatggtgagatcgagggccacccggtgtgg
gcagtgatctactactgtctgcgttgtggtgacctgaatgcagccatgcaggtggtgaac
agagtgcaacatcagctgggagacttcaagagctggtttcaggagtacatgaacagtcct
gatagacgcctttctccaacttcagagaacaagcttcgtcttcactatcgcagagtgctg
aggaacagcgccgacccctacaagagagccgtctactgcatgattgggaaatgtgacatc
actgataaccacggagaggtggctgataagacagaggactatctctggcttaagttgaac
caggtgtgttttgacgacaatgacagcagtgctcctcaggacaggctcactctcccacag
ttacagaagcagctgctggaagattatggagagtcccatttctccgcgaggcagcagccc
ttcctgtacttccaggtattgtttctgacagctcagtttgaggcggcggtggccttcttg
tttcgcgtggagagacttcgcagtcatgccgtgcacgtggcgttggtgctgtacgagctc
cggctgctgctgaagtcgtccggccagagcgctcagctgttgagtcaggagcccggtgac
cctccaatggtgcgtcgcctcaactttattcgtctgctcatgctttacactcggaagttt
gaatccactgatccacgggaagccctgcagtacttctacttcctgcgcaatgaaaaagac
aatcagggagagaacatgttcatgcgttgtgtcagtgaacttgtgatcgagagtcgagag
tttgacatgctgttgggaagattagagaaggatggcagtaggaaacctggcgtcatcgat
aagtttgccggagacacgagagcgatcatcagtaaagtggctctggaggctgagaacaaa
ggcttgttcgaggaggcggtcagactatacgaactggctaggaacccagataaggtgttg
gagctgatgaacaagctcttgagtccggtcatcgcccaggtcagtgcccctcagtccaac
aaggagaggctaaaaaacactgcagtggctatcgctgagaggtatcgttctcaggggtta
gcaggagagaagtcggtcgatagcactttctacctgctgttagacctgatgacattcttc
gacgagtaccacgcgggtcaggtcgacagagcttacgatgtgatggagcgtttgaagctg
cttcctctcagtcaggacagcgtggaggagagagtcgctgccttcaggaacttcagtgat
gaggtacgtcacaacctgtctgaagtgcttttggccaccatgaacatcctcttcacccag
tacaaacgcctgaaggggacgccagcaggcacaccaggacgcccacagaggaccatcgag
gacagtgatgtgcaactgcgcagccaggcccgagcgctgatcacttttgctggcatgatt
ccctacaacatggccggggacaccaacgcacggctggtgcagatggaattactgatgaac
tga
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