Cololabis saira (Pacific saury): 133444767
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Entry
133444767 CDS
T09849
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133444767
04121 Ubiquitin system [BR:
csai04121
]
133444767
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
133444767
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
133444767
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
Motif
Other DBs
NCBI-GeneID:
133444767
NCBI-ProteinID:
XP_061578645
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Position
5:39004166..39007152
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AA seq
617 aa
AA seq
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MAGRTEDDAQKLRPKTSTVWEHFNENKPTKQVKCKLCDAQLSYHGSTTAMHEHLKRRHPG
AVTPTRAAESSFKQRRVDEFVMTRGSCTPQMATVLTQSILNMIVTDMRPIAMVEDDGFKQ
MIQTFHPGYTLPSRTHFTKLIEEKYETVVSDIKATLKLINKNKIALTADAWTSISTEAYL
GITCHFISDDWELTSLCLTTMPLEERHTGSNIAAWIEEAMARFEISESNIVALVHDNGSN
IVLAANILQEKHGWMSIRCAGHTLQLVINRALKHPQIIKTLGAARCLVEHFRKSELASSK
LRAKQKQMGTPEHKLIQDVSTRWNSTFYMVTRLLEQRWPLTATLSDPTVTQSNKQYLDLK
ADQWLLLEELAKALEAFECATVYLSSESYVTVSALPPLVRGLLKSTHTTYDAAPVQAFQA
VASEETTVRWTNEVTVTREPCTQVIAAALDPRFSKLKFLTPEDRFTVQKKVQALALQSIQ
GAEKKNASEADKSLASAERTFSALDSLLACDSSTDSDTETNEQDAHNQSITNEILMYFGQ
QPLSKTESPLSWWKSNEAKYPTLASLAKSFLCIPATSTPSERLFSAAGNIASKKRASLTP
KHVDMLTFLHCNLHKKK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagaactgaagatgacgcccaaaaacttcgtcccaaaacttccacagtttgg
gaacattttaacgaaaacaagccaacaaagcaagttaagtgcaagctatgtgacgcccag
ctttcataccatggaagcacgacggcgatgcatgagcatctgaaacgccgacaccccgga
gccgtaacacctacacgtgccgcagaaagtagttttaagcagagacgtgtggatgagttt
gtcatgacaagaggttcatgcaccccccaaatggctacagtcctgacacagagcatcctt
aacatgattgtgaccgacatgagaccaatagccatggttgaagatgatggcttcaagcag
atgatccagacctttcatccaggctacaccttgccatccagaactcattttaccaaactg
attgaagaaaagtatgagactgttgtcagtgacataaaggcaactcttaaattaatcaac
aagaacaagattgccctcacagctgatgcctggacaagcatttccacagaggcatatctt
ggcatcacatgtcacttcataagtgatgactgggagctcacaagcctctgtctcacaacc
atgccactagaagagcgacatactggatcaaacattgctgcatggattgaggaggccatg
gcaaggtttgagatatctgaaagtaatattgtggctcttgtccatgacaatggctccaac
attgtcctggctgcaaacattctgcaagaaaaacatgggtggatgtcaatccgctgcgca
ggtcacactttgcaattagtgatcaatcgtgctctaaaacaccctcagatcataaaaaca
ctgggagcagcaagatgtcttgttgagcacttcagaaaaagtgaactggcttcaagcaag
ctgagggccaaacagaaacagatggggaccccagaacataaacttatccaagatgtctct
accaggtggaacagcaccttttacatggtcacccgtttgctggaacagagatggccgctg
actgcaacactgtctgacccaacagtcacgcagagtaataaacagtaccttgacctgaaa
gcagatcagtggctcctgctagaggaactggctaaagctcttgaagcctttgaatgtgcc
acagtctacttgagtagtgaaagttatgtgacagtttctgctctccctcctctggtcaga
gggcttttgaagtccacacacaccacctatgatgcagctcctgtgcaggcctttcaggca
gttgcttcagaggagaccactgtacgctggactaatgaggtcacagtcacacgtgaacca
tgcacacaggtcatcgcagcagccttagatccacgatttagtaaactgaaatttctgacc
ccagaggataggttcactgttcaaaaaaaagtccaagctctggccctgcaatccatccaa
ggggctgagaagaaaaatgccagtgaggctgacaaaagccttgcctcagctgagagaact
ttttcagctctagattcactgctggcctgtgactcctcaacagacagtgacactgagacc
aatgaacaggatgctcacaaccagtctatcaccaatgagatactgatgtacttcggacag
cagcctctttccaagactgagagtccgctttcttggtggaagtctaatgaggcaaagtat
ccaacccttgcatcactagccaagtcattcttgtgcattccagctacctctacaccatct
gagcgtctcttctctgcagctggaaatatcgcctcaaagaagagagccagcctcacacct
aagcatgttgacatgcttacgttcctgcactgcaatttgcataaaaaaaaatag
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