Cololabis saira (Pacific saury): 133444860
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Entry
133444860 CDS
T09849
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133444860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133444860
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133444860
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
HECT type E3
133444860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
133444860
NCBI-ProteinID:
XP_061578743
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All DBs
Position
5:complement(20250573..20270909)
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AA seq
1014 aa
AA seq
DB search
MFSWGEEYGHSFRLKNSPAVTNRDGVTLLKLTFRTADLCAGGSVLAFAKTSGEVFIVRTN
QGDDGRRVRGKYKFVSCQEKAQAVSCGEDVVMLLSERGSVFSVDTTHTPYTASSLRALQN
IPVTQVACGSQHTLALTKDGRVFAWGQDSRGQLGLGKGGSGTSSPRQLGCLAGLPLAQVS
AGGEQSFALSVSGGVFGWGRNDCGQLGLGDAEDRHIPTPVHHLNKKKTLLISCGRDHTAV
LTKDGAVFTFGSGQHGQLGHNSLRDERRPRLVAELWGAKATKIACGRYHTLVLTDSKKVY
SFGCDAQGQLGRGEESHPSVPLPVQLPHGNTNGHMIHNIYAGCNSSFATCMSHEAVHSES
SSTTNTDATLHCIENKVDRWVSECDSKLGKMTKQEIHLTFSSASFMNQSFLDHRKDGHFQ
TSPLSSGLDLSLAPSVFRKLVEKDDILTEVETVVVKLLHSLGVKPVGVEGLRLFLILSEL
LRAIQERGVNQSLRLAVEVAAVMRKLSAESLQILECWWSSLSSSTLRRHVKAWKTALSAI
LPHVPSPRTTIKNVLLVLQVLHKANNRRKRRISRATFCLEIYQRFLLEELQLWLSEIKTN
NNNRRLQSSADDQPFLYCSFLFVLGLKLKKEAFYNYALITKGEHMNPGKVEMQFDFQYGL
VPVQKYDYFELHLRRASLVEDTFAQLAAAPPSDFKKTLMVYFDGDSKVTQVYRKDLFHHL
FRNIVETKPEMFMFNDSKTLAWFPSKATEELKADLHLFGVLCGLALYNDCITYLAFPLAL
FKKLLRLEPTLEDMMEFSSSVGQSLQYILNYEEDDLENQYYDFVINWDGANVDLDPQNPG
KAVTSQNKREFVDAYVNHAFNKSVESTFQEFERGFFQVCDRPLLKLFGPEELRRVLAGHD
DYDWEKLKQNALCDLYDLSPSTIQMFWEVFDELTEDQKKDFLWFLTGFRKPPILGMEQIQ
MQMRSKQILSGSHDQHFPESLTCHCILELPSYSTKEIMRDRLIAALEPESGFLE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtggggagaggagtacggccacagctttcgcctgaagaacagcccagctgtc
acgaacagggacggagttacgcttttaaagctcactttccgcaccgcagatctgtgcgca
ggtggcagcgtgctcgccttcgccaagaccagcggggaagtgttcattgtgcgcaccaac
cagggcgatgatgggagaagagtccgaggaaaatacaagtttgtgagctgtcaggagaaa
gcccaggctgtgagttgtggtgaggatgtggtgatgctgctgtctgagagaggctcggtg
ttttccgtggacacgactcacactccttacaccgccagctctctgcgagctctgcagaac
attcccgtcacccaggttgcttgtgggagccagcacacgcttgcactgaccaaagacggc
cgggtgtttgcgtggggccaggactccaggggtcagctcggcctggggaagggaggatct
ggcaccagttccccccgacagctgggatgtctggcgggcctgcctctggctcaggtgtcg
gccggaggagagcagagctttgctctgtccgtgtctggaggcgtgttcggctggggaagg
aatgattgcggacaactcggactgggcgacgctgaagatagacatataccaactccagtt
catcacctgaacaagaagaaaactcttttaatttcctgtggacgggaccacactgcagtt
ttgacaaaggatggtgctgtgtttacattcggctctggccaacatggacagcttggacac
aactcattacgagatgagcgccgtccgcggctggttgcagagctctggggggcaaaagct
acaaagattgcatgtggaagatatcacacattggtgctgacggactcaaagaaggtctac
tcctttgggtgtgatgctcaagggcagctggggcgtggagaggagagccatccatctgtg
cctcttccagtccaactgccacatggtaacacaaatggccacatgattcacaacatctac
gccggatgcaacagttcatttgcaacgtgcatgtctcatgaggccgttcacagcgagtcc
agcagcaccacaaacacggacgcaacactgcactgtattgaaaataaagtggatagatgg
gtttctgagtgtgattcaaagctagggaagatgacgaagcaggaaatccatttgacattt
tcctctgcatcctttatgaatcagagctttctcgatcacaggaaagacggtcatttccaa
acatcaccactttcctctggtttggacttgtcacttgctccaagtgtttttaggaaacta
gtggagaaggacgatatcttaacagaggtggaaactgtggtcgtgaagctgcttcactct
cttggtgtgaaaccagtgggagtagaagggttgaggctcttcctgattctcagtgagctc
cttcgtgctattcaggaacgtggcgtgaatcagagcttgaggctcgctgtggaggtcgcc
gccgtcatgcgaaagctgtctgccgaaagcctgcagattttagaatgctggtggtcctcg
ctgtcatcctccactctgcgcaggcatgtgaaggcgtggaagacggccctctcggcgatc
ctgccccatgtgccctctcctcgcaccaccatcaaaaacgttctactggttcttcaagtc
ctacacaaagccaacaacaggaggaagaggagaatttctagagccactttttgtttggag
atttaccaaagatttcttctagaagagctgcagctttggctgtcagaaatcaagacgaac
aacaacaacaggagactgcaaagcagtgcagatgaccaaccattcctctactgtagcttc
ctttttgtgttgggactcaagttaaagaaagaggctttttacaactacgctctcatcact
aagggagaacacatgaaccctggaaaggtggaaatgcaattcgattttcaatacggattg
gttcccgtacaaaagtatgattattttgaattgcatctgaggcgagcgtcacttgtggaa
gacacctttgcacagctggctgctgcccctccgagtgacttcaagaagacactcatggtc
tattttgacggagactcaaaggtcacacaggtctacaggaaagacttgttccaccacttg
tttcgcaacattgtggaaactaaaccagagatgttcatgtttaatgactccaaaactctg
gcgtggttcccctctaaagcaacagaggagctgaaggcagatctccacctgtttggagtt
ctgtgtggactggccttgtacaatgactgtatcacgtacctggcgttccctctggctctg
ttcaaaaagctgctccgcttagagccgacgctggaggacatgatggagttcagttccagt
gttggacagagcctgcagtacatcttgaactatgaggaggatgacctagaaaaccagtac
tatgactttgtgattaactgggatggtgcaaatgttgacctcgatcctcaaaatccagga
aaagcagtcacgagtcaaaataagagggagtttgtggatgcctacgtgaatcacgccttc
aacaagtcagtggaaagcacttttcaggagtttgagcggggcttcttccaggtgtgtgac
cggccgctgctgaagctgtttgggccggaggagctgcggcgagtactggcaggccacgac
gactatgactgggaaaaactcaaacagaatgcactttgtgacttgtacgacctaagcccg
tccacgattcaaatgttctgggaggttttcgatgaactgacggaagatcagaagaaagat
ttcctctggttcctcactggtttcaggaagccccccattctcggcatggagcagatccaa
atgcaaatgcgaagtaaacaaatcttaagcggatcccacgatcagcactttcctgagtca
ctgacgtgtcactgcatcctggaactgccttcatactcaaccaaggagatcatgcgagac
agactcatcgcagccctggaaccagagagtggattcctggagtga
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