Cololabis saira (Pacific saury): 133445592
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Entry
133445592 CDS
T09849
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133445592
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133445592
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133445592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
133445592
NCBI-ProteinID:
XP_061578903
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All DBs
Position
1:40230202..40251157
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AA seq
633 aa
AA seq
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MRGSSYGDRDRGRDRPRFGGGMGGRSGSNKFGNPGERLRKKKWNLDELPKFEKDFYTQHD
EVERMGQFEVEEFCRRKEITIRGSGCPKPVTAFHQAQFPQYVIDVLMQQNFKEPTAIQAQ
GFPVALSGKDIVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQV
QQVAYDYGKSSRIKSTCVYGGAPKGPQLRDLERGVEICIATPGRLIDFLESGKTNLRRCT
YLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKEYIQINIG
ALELSANHNILQIVDVCMETEKDNKLMQLMEEIMTGEEKKTIIFVETKKRCDDLTRRMKR
DGWPVMCIHGDKSQPERDWALAEFRSGKSPILIATDVASRGLDVEDIKFVINYDYPNSSE
DYVHRIGRTARSTNTGTAYTFFTPGNLRQARHLVRVLQEARQDVNPKLLQLAGSGRGGGG
GGGGGRMRYHGGGGGSSSSSANNPNLMFQEVCDRRMHPGGGGNGQAFGRDGRNNRDGDRS
MGRDDRNTYNLASDQYQNYSNSGNYNSHGGGQCGSSQDQSGALQAQFGQAPLPGGLQPLM
GQQFAPSQPSLMGFMGQAPYAYPCPQAPGIPRN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagaggatcttcctacggagacagggaccgtggacgggacaggccacggtttgggggt
ggtatgggcggccgcagtggatccaataagtttggaaatccaggagagcgacttcgcaaa
aagaagtggaacctggacgagctgccaaaatttgaaaaggacttctatactcagcatgat
gaggtggagcgcatgggacagtttgaagtggaagagttttgcaggaggaaggagatcacc
atcagaggttcaggctgcccaaagcctgtgactgcttttcaccaggcacagtttcctcag
tatgtgatagatgtgctgatgcagcagaacttcaaagaacccacagcgatccaggcccag
ggttttcctgtggccctgagcggcaaggacatagtgggaattgcacagactggttctgga
aagacgctggcctacctgctccctgcgatcgtacacattaaccaccagccctacctggag
agaggagatggtcctatatgtctcgttcttgccccaaccagagagttggctcagcaggtg
cagcaggttgcctacgactatggcaagtcttctcgtatcaaaagcacctgcgtctacggt
ggagcacccaaaggaccacagttacgagacctcgagaggggtgttgagatctgcattgcc
acgcctggtcgccttattgacttcttggagtcagggaagaccaacctgcggcgctgcacc
tacctagtgctggatgaggctgaccgcatgttagacatgggctttgagccgcagattcgc
aagattgttgatcaaatcaggcctgacagacagacactgatgtggagtgcaacgtggccg
aaagacgttcgccagctggcggaggacttcctaaaagaatacattcagattaatattgga
gctttggagctcagcgccaaccacaacatcctgcagattgttgatgtctgcatggagacg
gaaaaggacaacaaacttatgcagctgatggaggagataatgaccggagaggagaagaaa
accatcatctttgtggagactaaaaaacgatgtgatgatcttactcgaaggatgaagcgt
gatggttggccagtaatgtgtatccatggagacaaaagccagccagaaagagactgggca
ctcgcagaatttcgaagtggcaaatcccccatcctgattgcgactgatgttgcctctcgt
ggcctggatgtggaagatatcaagttcgttatcaactatgactatcccaactcctctgag
gattacgtccatcgtattggacgcacagcccgcagtaccaacacgggtacagcttacacc
ttcttcacacctggaaacctgcggcaggcccgacatctggttcgggtgctccaggaagct
cggcaagacgtcaatcctaaactgcttcagctcgcaggttccggcagagggggcggcggc
ggcggcggcggtggtagaatgcgttaccatggcggcggcggcggcagcagcagcagcagc
gccaacaaccctaacctaatgtttcaggaagtatgtgatcggcgtatgcatcctggcgga
gggggtaacggccaagcatttggccgtgacggtcgcaacaaccgtgacggcgatcgatcc
atgggtcgcgatgacaggaacacctacaaccttgcttcagaccagtaccagaattacagc
aacagcggaaactacaattcccacggtggaggtcagtgtgggagcagtcaggatcagtcc
ggcgcactgcaggctcagtttggccaggctcccctaccaggggggctgcagcctctaatg
gggcagcagtttgctccatcacaaccctcactcatgggcttcatggggcaagcaccgtat
gcctatccttgtcctcaagctccaggaattcccaggaattaa
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