Cololabis saira (Pacific saury): 133445649
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Entry
133445649 CDS
T09849
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133445649 (impg2a)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
133445649 (impg2a)
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Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
133445649
NCBI-ProteinID:
XP_061578956
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Position
6:45343080..45407242
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AA seq
1242 aa
AA seq
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MLPTSWSSVFCSVLLSLLLLDPRTGASSEGSSMGFLSLPYMNEPALLPRVTRVSELKAAA
PHPAASSRRRRNIFYQAGLRLCGQDTEEQVLASHLSYFHLRVCQETVWEAFKIFWDRLPE
QDEYQRWMGRCQDGSATAQDIGEYFSTSEEHRERVQQKLSHSTLKSTPTPETPAEPEPAG
SPDTGDEAAEDVEAVSTATTEENSRLNDITVQPTTAPVQQQVVEMSILLTGEVFSDDLHD
PASLHFQTLSRHLVDKIEDALEELPGFRSVSVIDFRPQKDNQGTDGVVADYAVTVLVDGD
GVSSEQIDYLTLQSNLVENSYREVRERSTVVYSRNKEEESTDTLPIGEPESVSEVPALVG
SAGETTVSDLHPGLSAAVPPVTAAGACNTTHVPVGAIEDPSQVWTPADDSGVDVLPEPSE
TNTVSVSDGDVVVLEESELVTPAGVLVSNTPEDLQEEGLLLEETRHVIVAEEPEEPEEPE
EPPPEPSSTEPPPVATEPLAVATEPPAVATEPLAVATEPLAVATEPPAGGATLPEPPVET
EASGSHEDNLPEPPTTSAEEETVPRQNPSSENTVMVQDISAEEEKGDVAAADEEPGEHGD
EAAGNEIPEDTETSTTVTETTEEEDLVVSPTVTETIEDEEEEGEEEEGPSAAPPLAEDVD
LWSEASDPDAAETSRRPDADEIVMETPEEPHPTDAPNSSQEAEDAAVNPQDAAIDTEDAA
VIDTEEDAAIDTENPALKDEGSEETAESDGEEEEEKEEEKEETVVPDLPEISTEDLTEDE
ILPASKSDPEPSVTNSPASPQPTSSSPEKESPFTLISVISPDPEDQPEISITTLLEVEDS
DDVTTGDDGHGVVSFGFGLTNLTEEGSTGFPFGVSQGTDQASIAVPVNPGRALIVFFSLR
VTNMVFSDDLFNKSSPEYKALEQRFLELLVPYLQSNLTHFENLEILNFRNGSIVVNSRMK
FGRPVARGVTTTVYLILEDFCNTAYQTMNLAIDKYSLDVESGDQADPCKFQACNEFAECK
VNKWSGEAECVCNAGYFSVDGLPCQSICELQSDFCLNDGKCDVIDGQGAICRCRVGENWW
YRGEHCEEYVSEPLVVGIAIASVAGFLLVASGVLFFLARTLRDQYDKDESEDPIRRAESL
PSLERATKYNPMFESEATTGYSHYYRRYPEAPVYSSASAEASTDFSSEEIRHIYENSELT
KDEIQDRIRIIELYAKDRQFADFVRQHQTVLDTRGESSSTQT
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgctccctacgtcctggagcagcgtgttctgctcggttctgctgagtctgctgctgctg
gacccacgcacaggtgcgtcctccgagggttcctccatgggattcctctctctgccttac
atgaacgagcccgcgctgctgccgcgcgtcacccgcgtgtccgagctgaaggcggcggcc
ccacaccccgcggcctcctcccggcggaggaggaacatcttctaccaggccggactgcgc
ctgtgcggccaggacacggaggagcaggtgctggccagccacctcagctacttccacctg
agagtgtgccaggagaccgtctgggaggcgttcaagatcttctgggaccggctgccggag
caggacgagtaccagcgctggatgggccggtgccaggacgggtcggccacggcccaggac
atcggtgaatacttcagcacgtcggaggaacaccgagaacgagtgcagcagaaattgtct
cattcaaccctgaaaagcacaccgacaccagagaccccggcggaaccagaacccgctgga
tctccagacactggtgacgaggcggcggaggatgtagaggccgtttccacggcaacgacg
gaggagaattcacggctcaacgacatcacggtgcagccgaccacggcgccggtgcagcag
caggtggtggagatgagcatcctgctgaccggggaggttttcagcgacgacctccacgac
cccgccagcctccacttccagacgctcagccggcacctggtggacaagatagaagacgct
ctggaggagctgcctggcttcaggagtgtgtcagtgatcgacttcaggccgcagaaggac
aaccaagggacggacggcgtggtggcggactacgccgtcacggtgctggtggacggagac
ggagtcagctcggagcagatcgactacctcaccctgcagtccaacctggtggagaactcg
taccgggaggtcagggaacgatccacggtggtttacagcaggaacaaggaggaggaatcc
accgacaccctgcccatcggagagccggagagcgtgtccgaggtccctgcgctggtcggc
tctgcaggtgaaaccacggtgagtgacctccaccccggcctgagcgccgcggtgccgccg
gttacggcggctggcgcgtgcaacaccactcatgttccggtcggcgccatcgaagacccg
tctcaggtctggaccccagcagatgactccggggtcgacgtcctccctgaaccctcagaa
accaacacggtgtcggtatcagacggagacgtggtggttctggaggagagtgagctggtg
acgccggccggcgtcctcgtctccaacacgcctgaagaccttcaggaggaaggtctgttg
ctggaggaaacgaggcacgtcatcgtcgcagaggaacctgaggaacctgaggaacctgag
gaacctccacccgagccatcctccacggagccgccgccggttgccacggagccgctggcg
gttgccacagagccgccggcggttgccacggagccgctggcggttgccacggagccgctg
gcggttgccacggagccaccagcggggggcgccacgctgcccgagcctccggtggagacg
gaggcttcggggtcacatgaggacaacctgccggaacctcccacgacctcagcagaagaa
gagacggttccccgccaaaatccttcctcggagaacacggtcatggtacaagacatcagc
gctgaagaagagaaaggtgatgtcgctgcagcggacgaagaacctggagaacatggagat
gaggctgctggaaatgagattccagaagacacagaaacctccactactgtaacagaaacc
acagaagaagaagacctggtggtctcccctactgtaacagaaaccatagaagatgaagaa
gaagaaggagaagaagaagaaggtccgtcagctgcccccccactggcggaggatgttgat
ttgtggagtgaagcttcagatccggatgcagcagaaacgtctcgacgccccgatgctgat
gagatcgtcatggagacgccagaagagcctcatcccactgatgctccgaattcgagccag
gaggccgaggacgccgccgtcaatcctcaggatgccgccatcgatactgaagacgccgcc
gtcatagatactgaggaagatgcagccatcgatactgagaatcctgcgttgaaggatgaa
ggttcagaggagacagcagagagtgatggagaggaagaggaggagaaggaagaggagaag
gaggagacggttgtgccagatctaccagagatctcaaccgaggacctcacagaggacgag
atcttaccagcgagtaaaagtgatccagaaccgtcggtgacgaattctccagcttctcct
cagccgacgtcttcgtctccagaaaaggagtctcctttcaccctgatctccgtcatcagt
ccggaccccgaggaccagccggagatctccatcaccacactgttggaggtcgaggactcg
gacgacgtcaccaccggggacgacggccacggcgtcgtgtccttcggcttcggcctgacc
aacctgacggaggagggcagcaccgggttccccttcggcgtgtcccaggggacggaccag
gccagcatcgccgtgccggtgaaccccggccgagccctgatcgtgttcttcagcctcagg
gtcaccaacatggtgttctccgatgatctgttcaacaagagctccccggagtacaaggcc
ctggagcagcgcttcctggagctgctcgtgccgtacctgcagtccaacctgacccacttc
gagaacctggagatcctgaacttccggaacggcagcatcgtggtgaacagccggatgaag
ttcggcaggccggtggctcgaggcgtcaccaccaccgtgtacctgatcctggaggacttc
tgcaacacggcctaccagaccatgaacctggccatcgacaagtactcgctggacgtggag
tcaggcgaccaggccgacccctgcaagttccaggcctgcaacgagttcgccgagtgtaag
gtgaacaagtggtcgggggaggcggagtgtgtgtgcaacgccggctacttcagcgtggac
ggcttgccctgccagagcatctgcgagctgcagagcgacttctgcctcaacgacggcaag
tgcgacgtcatcgacggacagggcgccatctgcaggtgccgggtcggggagaactggtgg
taccggggagagcactgtgaggagtacgtgtcggagccgctggtggtcggcatcgccatc
gcctcggtggcaggattcctgctggtggcgtcgggggttctgttcttcctggcccggacg
ctgagggaccagtacgacaaggacgagtccgaggacccaatacggcgggcggagagcctc
ccgtccctggagcgggccaccaagtacaaccccatgtttgagagcgaggccacgacgggc
tacagccactactaccgccgttacccagaagccccggtgtacagcagcgccagcgccgag
gcctccaccgacttcagcagcgaggagatccggcacatctacgagaacagcgagctcacc
aaggatgaaatccaagacaggatacgcatcatcgagctctacgcgaaggaccggcagttt
gcagacttcgtgcgacaacatcagacagtgctggacacccgcggggagagctcctcgacg
cagacatga
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