Cololabis saira (Pacific saury): 133445724
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Entry
133445724 CDS
T09849
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133445724 (ttf2)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133445724 (ttf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Zn_ribbon_GRF
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
133445724
NCBI-ProteinID:
XP_061579080
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All DBs
Position
6
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AA seq
1129 aa
AA seq
DB search
MEKVLCEVHGSVCMLKTGVKDGANKGKSFYVCVDKQSCDFSQQSSIPASHCLNHEDSVVE
LQALTYSQQQQSHRLYYRCTEGKKTGVRWCGSVPWIQAEKEKRSPLLDTQQQPTCLSPVR
NPFKASRKTEKDSEWRKMQGGKREEEDGEKKTVETDHKAGGGESRQKENVKAVGAGLEPE
GNVTLSGSYQGKPLPLGMKIKKRISSEETGNSKKISDKMEDKTGEKHAEQVAEKKVSTPK
LEMVQTKKISPTSVDLHKSAPQQPTNDKTRPGNRIDPTVQQSIAESAPSGSSQAHKDPDS
GVSSNTESNKTKTQQDDGDDDVVLVSVKPAAQKTLPVSAVQKPLTTFPGFQSAAKVKDGM
HSLLSAQLQQKKATLSSVNLAALPDKGERLKTQVKELEDALDSLSLAGPSPPESVDERNG
KHSATGSSQLNPFSRQGGTILLPCPPVSGAIQPQASGISLGLQLSQGHHQMSGAEPQMDA
FYGGRMTSDRLLAVKNATCEAIDHLHKSLESCPDPEAEVPDPSGIKVTLLAHQRRALSWL
LWRETQNPCGGILADDMGLGKTLTMIALILAKKVKAKKGDEEKEEDSWVSKTDSTIVDSK
GTLIICPASLIHHWKNEIDRHVKKRKLTVYLYHGPNREKSAKVLADYDVVVTTYSLVSKE
IPVQKEEAGNPSKDPDQEPPRSAPLMRVVWARVVLDEAHNIKNPKVQTSMAVCHLRATAR
WAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLWKAQVDNGSKRGRERLNILTRNLLLRRT
KYQLDSTGKPLVSLPNRTCTLHQLKLSKDEQSVYDVLFAQSRSTLQNYLKRHEGNDVNKG
NASSSNPFDKVAQEFGLSQADPAAASSQQPPQASSTIHILSLLLRLRQCCCHLSLLKKTL
DSAELQGDGIVLSLEEQLNALSLSPGSSSSGPDPKDTVALNGTRFPSLIFEDTSKSTKIS
AITSELMAIREKSGDQKSVIVSQWTSMLSIVAVHLNQMGLRCGVIDGSVNPKRRMDLVEE
FNTNPKGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQHRDVTI
HRFQCEGTVEEKISTLQIKKKELAQNVLSGTGSTVSKLSLADLRTIFGV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtcttatgtgaagtccatggcagcgtgtgtatgttaaaaacgggcgttaaa
gatggagcaaataaagggaagagcttctatgtgtgcgttgacaagcaaagctgtgatttc
agccaacagtcgagcatcccagcttcccactgtctgaaccacgaggactcagtggtggaa
cttcaggctctcacttacagtcagcagcagcagagccaccgattgtactacagatgcact
gagggtaaaaaaactggcgtaagatggtgtggaagtgtgccgtggattcaagcagaaaag
gaaaagagaagccctctgttggacacgcagcaacagcccacctgcctttcacctgtccga
aaccccttcaaagcctccagaaagacagagaaagattctgagtggagaaagatgcaaggt
ggtaaacgtgaggaggaggatggagaaaagaaaaccgttgagacggatcacaaggctggg
ggaggagaaagccgtcagaaagaaaacgtgaaggctgtaggtgctggattggaaccagaa
ggaaacgtgactttgtctggtagctaccagggtaaaccacttccactcgggatgaagata
aagaagaggatttcaagtgaggagactggcaattccaaaaaaatatcagataagatggaa
gacaaaactggggagaagcatgctgagcaagtagcagaaaaaaaggtttctacacctaaa
cttgaaatggttcagactaagaaaataagccctacctctgttgatcttcacaagagtgct
ccgcagcaaccaaccaatgacaaaacccgtccagggaatcggattgaccccacggtgcaa
caaagcatcgctgaatctgcacccagcgggagcagccaggctcacaaagaccctgattct
ggagtttcatccaacacggagtccaataaaaccaaaacgcagcaagatgatggagacgat
gacgtggtgttggtgtcagtgaaacctgctgcacagaaaactcttcctgtttccgccgtt
caaaaacccctgaccaccttccctggattccagtcagcagccaaggtgaaagatgggatg
catagtctgctgtcagctcagctccaacaaaagaaggccacgttgtcttcagtgaatttg
gcagctctgccagacaaaggagagaggttgaagacgcaggtgaaggagctagaggatgcg
ctggactcactgagccttgctggtccttctccgcctgagtctgtggatgaacgtaatggc
aaacattctgctactggcagcagccaactcaacccattcagccgtcaggggggcaccatc
ctgctcccgtgtccccctgtctccggtgccatccaaccccaggcctccggcatctccctg
gggctccagctgagccagggacaccaccagatgagtggagcggaaccacagatggacgcc
ttttatggtggaaggatgacttctgatcgtttgctagcagtgaaaaatgcaacctgtgaa
gcaatcgaccatctccacaaatccctggagtcgtgtcccgaccccgaggctgaagtccca
gaccccagcggcatcaaggtgacgctcttggcacatcagcggagagctttgtcctggctg
ctttggagagaaacacagaacccttgtggaggaattctggccgatgacatgggtcttggg
aaaacgctgacgatgatcgcactcattttggctaagaaggtgaaagcgaaaaagggagat
gaagaaaaggaagaagactcctgggtttccaaaactgactccaccattgtagattccaaa
ggcactctgatcatctgtcctgcttctctgattcatcactggaagaatgaaattgaccgg
catgtcaaaaaaaggaagctgaccgtgtatttgtaccacggccccaaccgcgagaaaagc
gccaaagtgctggcggattatgacgtggtggtgaccacatacagtctggtgtccaaggag
atcccagtccagaaggaagaggctggtaaccccagcaaagatcctgatcaggagccgcca
cgctcggctcctttgatgcgagtggtttgggctcgcgtggttcttgatgaagcccataac
atcaaaaacccaaaagtgcagacttcaatggctgtctgtcacctgagggctacggcccgc
tgggccgtcaccggtacgcccatccagaacaacctgctggacatgtactcactactcaag
tttctgcgttgttctccgtttgatgagtacaaactctggaaagctcaggtggacaacggc
tccaagagaggcagagagaggctcaacatcctgacgaggaacctgcttctgcgacgaacc
aaataccagctggactccactgggaaacccctggtgtctcttccaaaccggacctgcacg
ctgcatcaactcaaactctccaaggatgagcagtctgtgtatgatgtgctgttcgcacag
tccagatctactctgcagaactacctgaagagacatgaaggaaatgatgtgaacaaggga
aacgcttccagttcgaatccctttgataaagtggcccaggagttcggcttgtcccaggct
gatcctgctgcagcgagttctcagcagcctccgcaggcgtccagcaccatccacatcctg
tctctgctgctgcgtctccgccagtgctgctgtcacctttcactcctcaagaagactctg
gactcggctgagctgcagggtgacgggatcgtcttgtccctggaggagcagctcaatgcc
ctgtcactctcccccggctcctcctcttcagggcccgatcccaaagacacggtggcgctc
aatggcactcgcttcccttcactgatatttgaggacaccagtaaaagtaccaagatttca
gctatcacctctgagctgatggcaatcagagagaagagtggggatcagaaaagcgttatc
gtgtcccagtggaccagcatgctcagcatcgtagcggttcacctgaaccagatgggcctg
agatgtggagttattgacgggtctgtcaaccccaaacgtcgcatggacctggtggaggaa
ttcaacactaaccctaaaggaccgcaggttatgctggtttctctttgtgctggaggggtt
ggactcaatctcatcggtggaaatcacctctttctcattgacatgcactggaacccagct
ctggaagaccaagcctgtgaccgcatctatagagtcggacaacaccgagatgtcaccatc
cacaggtttcagtgtgaaggcacagtagaggagaagatttcaaccctgcagataaagaag
aaagagctggcccagaatgtgctttcaggaacaggaagcaccgtctccaaactctccctg
gctgatctaagaaccatttttggtgtctga
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