Cololabis saira (Pacific saury): 133445733
Help
Entry
133445733 CDS
T09849
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133445733
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133445733
Endosome - Golgi transport
Rab GTPases and associated proteins
133445733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
133445733
NCBI-ProteinID:
XP_061579104
LinkDB
All DBs
Position
6:6521404..6551684
Genome browser
AA seq
1126 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVTDRSNDFFLLQRRRGRGEPSSRITGLLVGALDTVLDSNARVT
PFRILLQVPGSQISWVIASGAVIEEVNKHWDWLVHNLLHSLSVFENKDDAASFVRGKVKG
LIAEEVRGRQAAQEEDPEKFREALRKFELHFGLPSSEKLVTYYSCCCWKGRVPRQGFLYL
SINHMAFYSFLLGKEVKFVIPWAEVTGLERVSTALMTEAIRISTRQRQREFSMFLNLDEA
FGVICQLADIALRRLLDSEGLELDRVLQQPARITKRVLEEQALRDYVLALFRLPRTEKLY
EVASCAVWTPHARCHTAGTLYTTDNYLCFSSRDEGSCSLLVPLSEVLSIEKAESTSLLPN
PVIVSIRTKKAFQLIELQDRDELVESTNCRLRAAQWKRSMFRRKSDTKRSVSSPAPYYTF
YYDTGYSDEEEMEEQVLRNTINSEALMTAFSQNQPGTDGNKQKMELEKQQLWEDHFSEFG
RGVHMFRTEKIQRLVAMGIPESLRGELWMTLSDASSELESHEGYYTSLVQKSMGHSSLAT
EEIERDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYAKEE
EAFWLLVAVCERMLPDYFNRRVIGAQVDQSVFEELIKERLSELAEQVPDLSTLSSVSLSW
FLTLFLSVLPFSSAVCVVDCFFFQGIKAIFQLGLAVLEANAAQLSASTDDGQALMILTSF
LDQVGSEELPSVPSPPPAAEERRCSDADAPAVGHINITHLINESYQKFGDLTVRQIERLR
RLHRVQVLQAHEDTIRENTLRLVSADVSISPEDLSDIYDLFKTEHFVSLYWGDSSSAAAA
ETAAWKFSDSSRSFVERQYRVDRPQLKSLYGLLAPWPAGSSQHSDTLANRTFTLLDQDRH
NLVTFKEFASWLDTLYCEDLNEKIRLLYRLHIPPALTESEDDASLKSPLLSTTRPLYVNL
PSDGEAEVKDYQEQLKQMLQDLAKEKDVEKPLPLMNQREFIQFCKTLYGMFHGDPEENEL
FQAIATVTSLVLQIGEVGHRGQAPASEDQEEAGAPEQAADGRSGGSPAGEDEWTVSYAQI
LASLLTEQALVNFFEKPLDLSAKISQAKEQQYQQRAGLLTLQRGAR
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagccggaggaagtcctgctgaagaacgcgctgaagctctgggtgacggac
cggagcaacgacttcttcctgctgcagaggaggagaggccgcggggagcccagcagcagg
atcacaggtctcctggtgggggcgctagacacggtgctggactccaatgccagggttaca
cccttccgaatcctcctgcaggttcctggctctcagatcagctgggtcattgctagcgga
gccgtcatcgaggaggtgaacaagcattgggattggctggtccacaacctgcttcactct
ctttcagtgtttgagaacaaggatgatgctgccagctttgtcagaggaaaagtcaagggc
ctcattgcagaggaggtccgcggccgccaggccgcccaggaagaagatccggagaagttc
agggaggcgctccggaagtttgagcttcacttcggcctcccctcgtcagagaaactggta
acatactactcgtgctgctgctggaaaggccgggtgcctcggcagggattcctctacctc
agcatcaaccacatggccttctactccttcctgctggggaaggaagtcaagtttgtgatt
ccttgggctgaggttacggggttggagcgggtttccaccgctctaatgacagaggctatt
cggataagcacacgacagcggcagagggagttctccatgttcctgaacctggacgaggct
tttggggtgatatgtcagctggctgacatcgccctcaggcggctgctggacagcgaaggc
ctggagctggaccgggttctgcagcagccggcacgcatcaccaagagggtcctggaggaa
caggcattaagagactacgtcctggctctgttccgactccctcgcacagagaaactctac
gaggtggcctcgtgtgcagtgtggacgccgcacgcccgctgccacacagccgggaccctc
tacaccaccgacaattatctgtgtttctccagccgagacgaaggaagctgcagtctgctc
gtacccctgtcagaggtgctgtcgatagaaaaagcagaaagcaccagcctcctgcccaac
ccggtgatcgtgagcattcggaccaaaaaggccttccagctgatagaactgcaggacaga
gacgagctggtggagagcaccaactgtcgactccgggcggcgcagtggaaacgctccatg
ttccgcaggaagagcgacaccaagaggagtgtgagctcccctgcaccttactacaccttt
tactatgatactgggtactcggatgaggaggagatggaggagcaggtcctgcgtaacaca
atcaacagtgaagctctcatgacagccttcagccaaaaccaaccaggaaccgacggcaac
aagcagaaaatggagctggagaagcagcaactgtgggaggatcatttttctgagtttggt
cgtggcgtccacatgtttcgtactgagaagatccaaagactggttgccatggggatacca
gagtcactacggggggagctgtggatgacactttctgatgcatcctcggagctggaatcc
cacgagggctattacaccagtctggtgcagaaatcaatgggccacagtagcctggcaacg
gaggagatcgagcgcgacctgcaccgctccctgccggaccatccggctttccaaaacccc
accggcatcgccgcactccggcgcgtcctcaccgcctacgctcaccgaaacccaaagatc
ggatactgtcagtctatgaacatcctggcatctgtgctgctgctgtacgccaaagaagaa
gaagctttctggctgctggtggccgtctgtgagcggatgctgcccgactacttcaaccgc
agggtcataggagctcaggtggaccagtccgtgtttgaggagctgataaaggagcgtctg
tctgagctggccgaacaagtgccggacttgtccaccctctcctccgtgtccctctcctgg
ttcctcacactcttcctcagcgtcctgcccttcagcagcgccgtgtgtgtggtcgactgc
ttcttcttccagggaatcaaggccatcttccagctgggtctggctgtgctggaggccaac
gctgcccagctctctgcatccacagatgatgggcaagctctcatgatcctcacaagtttt
ctagatcaggttgggagtgaggagttgcccagtgtcccgtcccccccgcctgctgcagag
gagcgccgctgcagcgacgctgatgctcctgcagtgggacacatcaacatcacccatctc
atcaacgagtcctatcagaaatttggagacctgacagtgcggcaaatcgagcgtcttcgc
cgtctacacagagtccaagtgctgcaggcgcatgaggacaccatcagagagaacactttg
cggctggtgtccgcagacgtgtccatctctccagaggacctgtcagacatctatgacctc
ttcaagacggagcacttcgtcagcctgtactggggcgacagcagctcggcggcggcggct
gaaaccgcggcgtggaagttcagcgactccagccgctcgttcgtggagcggcagtaccgg
gtggaccggccgcagctcaagagcctgtacgggctgctggcgccgtggcccgccggctcc
tcgcagcattccgacacgctggccaaccgaaccttcaccctgctggaccaggaccgccac
aacctggtcacgttcaaggagtttgccagctggctggatactttgtactgtgaggatctg
aatgagaagatccggctgctgtaccgccttcacatccctccagctctgacggagagcgag
gacgacgcctctctgaagagccccctgctgtccacgaccagacctctctacgtcaacctg
ccctccgacggtgaggctgaggtgaaagattaccaggagcagctgaagcagatgctgcaa
gatttggccaaagagaaggatgtggagaagcctctgccccttatgaatcagcgagagttc
atccagttctgtaagaccctctacggcatgttccacggcgatccggaagaaaacgaactg
ttccaggccatcgccacggtaaccagtctggtgctgcagatcggtgaggtgggccaccgc
ggacaagccccggcctcagaggaccaggaggaggcgggggccccggagcaggcggccgac
ggccggtccggcggcagcccggccggcgaggacgagtggacggtcagctacgctcagatc
ctggcgtcgctgctcaccgaacaagccttggtgaacttcttcgaaaagccgctggacctg
tcggcaaagatctctcaggccaaagaacaacagtaccagcagcgggccggtctgctgacg
ctgcagcggggggccaggtga
DBGET
integrated database retrieval system
