KEGG   Cololabis saira (Pacific saury): 133445789
Entry
133445789         CDS       T09849                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04137  Mitophagy - animal
csai04144  Endocytosis
csai04145  Phagosome
csai04148  Efferocytosis
csai05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:csai00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133445789 (rab5b)
   04145 Phagosome
    133445789 (rab5b)
   04137 Mitophagy - animal
    133445789 (rab5b)
   04148 Efferocytosis
    133445789 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133445789 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csai04131]
    133445789 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csai04147]
    133445789 (rab5b)
   04031 GTP-binding proteins [BR:csai04031]
    133445789 (rab5b)
Membrane trafficking [BR:csai04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133445789 (rab5b)
 Endosome - Lysosome transport
    133445789 (rab5b)
Exosome [BR:csai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133445789 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   133445789 (rab5b)
  Exosomal proteins of colorectal cancer cells
   133445789 (rab5b)
  Exosomal proteins of melanoma cells
   133445789 (rab5b)
GTP-binding proteins [BR:csai04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133445789 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 133445789
NCBI-ProteinID: XP_061579209
LinkDB
Position
6:9093638..9100848
AA seq 216 aa
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYADDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagcggtggccgctccaacggcacactcccgcagaccaagatatgc
cagttcaaactggtgctgctgggagacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtaaagggccagttcgatgagttccaggagacgaccattggagctgcattcctggcc
cagtcggtgtgtctcgatgacaccacggtgaagtttgagatctgggacacggcaggacag
gagcgataccacagcctggctcccatgtactaccgtggcgctcaggctgcaattgttgtc
tttgacatcaccaagccagagacgtttgagagagccaaagcctgggtgaaggagctgcag
aggcaggccagtcctaacatcgtcattgcactggccggaaacaaggccgacctcgctgag
aagaggctggtagaatacgaggaagcccagacgtacgccgacgacactggcctgctgttc
atggagacgtctgctaagacggccatgaacgtgaacgagctcttcctggctatcgcaaaa
aagatgccaaaaacagacacccagaacccaacacacgcagcgcggcatcggggagtcaac
ctgcaggacccggatgcccactccacccgagcctgctgcggtgggaactag

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