Cololabis saira (Pacific saury): 133445789
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Entry
133445789 CDS
T09849
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
csai04144
Endocytosis
csai04145
Phagosome
csai04148
Efferocytosis
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133445789 (rab5b)
04145 Phagosome
133445789 (rab5b)
04137 Mitophagy - animal
133445789 (rab5b)
04148 Efferocytosis
133445789 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133445789 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133445789 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133445789 (rab5b)
04031 GTP-binding proteins [BR:
csai04031
]
133445789 (rab5b)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
133445789 (rab5b)
Endosome - Lysosome transport
133445789 (rab5b)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133445789 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
133445789 (rab5b)
Exosomal proteins of colorectal cancer cells
133445789 (rab5b)
Exosomal proteins of melanoma cells
133445789 (rab5b)
GTP-binding proteins [BR:
csai04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
133445789 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
133445789
NCBI-ProteinID:
XP_061579209
LinkDB
All DBs
Position
6:9093638..9100848
Genome browser
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYADDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagcggtggccgctccaacggcacactcccgcagaccaagatatgc
cagttcaaactggtgctgctgggagacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtaaagggccagttcgatgagttccaggagacgaccattggagctgcattcctggcc
cagtcggtgtgtctcgatgacaccacggtgaagtttgagatctgggacacggcaggacag
gagcgataccacagcctggctcccatgtactaccgtggcgctcaggctgcaattgttgtc
tttgacatcaccaagccagagacgtttgagagagccaaagcctgggtgaaggagctgcag
aggcaggccagtcctaacatcgtcattgcactggccggaaacaaggccgacctcgctgag
aagaggctggtagaatacgaggaagcccagacgtacgccgacgacactggcctgctgttc
atggagacgtctgctaagacggccatgaacgtgaacgagctcttcctggctatcgcaaaa
aagatgccaaaaacagacacccagaacccaacacacgcagcgcggcatcggggagtcaac
ctgcaggacccggatgcccactccacccgagcctgctgcggtgggaactag
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