Cololabis saira (Pacific saury): 133445817
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Entry
133445817 CDS
T09849
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133445817 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133445817 (sptbn1)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133445817 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
133445817 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SOS1_NGEF_PH
BORCS6
Motif
Other DBs
NCBI-GeneID:
133445817
NCBI-ProteinID:
XP_061579276
LinkDB
All DBs
Position
1:complement(40883645..40936870)
Genome browser
AA seq
2347 aa
AA seq
DB search
MMTTVAADYDHMELQQQYSSSDTVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTSLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAL
ETEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLMGVQQQLQAFNTYRTVEKPPKFVE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVSVARELETERYHDIKRVAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNASKYSVSD
SGYKPCDPQVIQDRVSHLEFSYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWMREKE
QILSSMEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVQADHFGSAKIQER
IADLQAQWAALEQLAAGRKRRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAAALPKEEAESEDVRGRLAGIEERYKEVAELT
KLRKQVLQDALALYKMLSEANACEVWIDEKEQWLNNMEIPEKLEDLEVVQHRFESLEPEM
NNQASRVAVVNQIARQLIHNGHPSEKDIKTQQDKLNNRWGQFRDLVDQKKESLNSALGVQ
NYHLECNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTSMERDLAAIEDKLGDLRGE
AQRLAEEHPDQAKAITGRLAEITAVWEDMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGETVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINAERIQERVASIDERHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGALLVSEKPETEAVVKEKLAALQTMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQKEVVE
LQSQVKALGQEVKDADEVDGRRQLVEKKFQELLDPLRHRRNFLVASREVHQFTRDVEDEI
LWAQERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDILERSQGLLQDQTSN
SDGIRQRLADLQQLWDQLKEEAEQRHARLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSSVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDGVNRLADELINTGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYQDAKEILARIADKHKKLPEEVGRDQNTVEMLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRTLLEACDGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSSLMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRR
PPTPEPALVQKEEPLQESAVTQNGLASDQDSPRDAVDGVDMVNGVIERSSKEPSPTPSPT
LGRKSKSSQSSTLPSRNQDSISQMEGLLHRKHEWEGHNKKASNRSWHNVYCVISNQEMGF
YKDSKAVAQGSAYHNETPVSLKDAACDVASDYKKKKHVFKLRAADGNEYLFQAKDEEEMS
TWIQAILNASATDLPDTQSSNPGTPASVRAQTLPASITVTTESSPGKREKDREKDKEKRF
SLFKKKQ
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaacggtggccgccgactacgaccacatggagctgcagcagcagtacagcagc
agcgacacggtcaacaaccgatgggaggatgagtgggacaacgaaaacagctcagcccgc
ctctttgaacgctcccgcatcaaggcgctcgcagatgagagggaggcggtgcagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtgtcctgcaggatcacggacctg
tacatggacctgagagatggacggatgctcatcaagctgctggaggttctgtccggggag
agactgccgaagcccaccaaaggccggatgcggatccactgtctggagaatgtggacaaa
gctctgcagttcctgaaggagcagcgggtccacctggagaacatgggatcccatgacatc
gtggatggaaaccaccgcctaacgctgggcctcatctggaccatcatcctccgcttccag
attcaagacatcagcgtggaaactgaagacaacaaggagaagcggtcggccaaagacgcc
ctgctgctctggtgtcagatgaagacggctgggtatcccaacgtcaacatccacaacttc
accaccagctggagagacggcatggccttcaacgcgctcatccacaagcacaggcctgat
ctgatcgactttgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttc
aacctggccgagcagcacctgggcctgaccagtctgctggacccagaagatatcagcgtg
gatcatcccgatgagaagtccgtcatcacctacgtggtgacgtactaccactacttctcc
aagatgaaggcgctgaaggtggagggcaaacggatcggaaaggtcttggacaacgccctt
gagacggagaagatggtcgagaagtacgagtctctggcgtcggacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagttcgccaactctctgatgggggtccag
cagcagctgcaggccttcaacacgtaccggaccgtggagaagccgcccaagttcgtggag
aaggggaacctggaggttctgctcttcaccatccagagtaagatgagagccaacaaccag
aaggtgtacatgccgcgcgagggaaagctcatctccgacatcaacaaggcatgggagcgc
ctggagaaggcggagcacgagcgggagctggctctgaggacggagctcatccgccaggag
aagctggagcagctggcccgacgcttcgaccgcaaggcagccatgagggagacctggctc
agcgagaaccagagactggtgtcccaggacaactttggctttgaccttcaggcggttgaa
gcagctaccaagaagcacgaggcgattgagacggacattgcagcgtacgaagagcgcgtc
caggcggtggtttccgtggcgagggagctggaaacggagcgctaccatgacatcaagcgc
gttgcagccaggaaggacaacgtcatccgactgtgggagtacctgctggagctgctgaag
gcgcgcaggcagaggctggagatgaacctgggcctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctcctgtctcaggattatgggaag
catctgttgggggtggaggacctgctgcagaaacacgccctggtggaggccgacatcgcc
atccaggccgacagggtgaaggccgtgtccaccaacgccagcaagtactccgtctctgac
agcggctacaagccatgtgaccctcaggtgatccaggaccgagtgtcccacctggagttc
tcctaccaggaactgacccagttggctgctgagcgccgtgcccgtctggaggagtctcgc
cgcctctggaagtttttctgggagatggcggaggaggagggttggatgcgtgagaaggag
cagatcctgtcctccatggagcatgggaaggacctgacgggggcgctgcgcctcctcagc
cagcagcgcgccctggaggacgagatgagcggccgcgccggccacctgcagcacaccatc
gccgaaggccaggccatggtgcaggcggatcacttcggctcagccaagatccaggagcgc
atcgccgacctgcaggcgcagtgggcggcgctggagcagctggctgccgggaggaagagg
aggctggaggaggctctggccctgcaccagttccaggctgacgccgacgacgtcgacgcc
tggacgctggacgcgctgcgcatcgtctccagcggagagacgggccacgacgagttctcc
acccaggcgctggtcaggaaacacaaggacgcggcagcggaggtggccagctaccggccc
gtcatcgatgcgctacacgagcaggccgccgcgctgcccaaggaggaggcggagtcagag
gacgtgcgcggacggttggctgggattgaggagcgctacaaggaggtggcggagctgacg
aagctgaggaagcaggtgctgcaggacgcgctggcactctacaagatgttgagtgaagct
aacgcctgcgaggtctggatcgacgagaaggagcagtggctcaacaacatggagatcccc
gaaaaactggaggacctggaagtcgtccagcacaggtttgagagtctggagccagagatg
aacaaccaagcgtcccgtgtggccgtggtgaaccagatcgcccggcagctgatacacaac
ggtcacccgagcgagaaggacatcaagacccagcaggacaagctcaacaacaggtggggc
cagttccgggacctggtggaccagaagaaggagtccctgaactcggctctgggtgtgcag
aactaccaccttgagtgcaacgagaccaagtcctggatcaaagagaagaccaaagtcatc
gagtccacccaggagctgggcaacgacttgaccggggtcatggccctgcagcgcaaactg
accagcatggagcgggacctggccgccatcgaggacaagctgggcgacctgcgaggagaa
gcccagcggctggccgaggagcaccccgaccaggccaaggccatcacgggccgcctggct
gagatcaccgccgtctgggaggacatgaagaacactctgaagacccgcgaggagtctctg
ggggaagccaggaagcttcagcagttcctgcgagagctggacgacttccagtcctggctg
tcccgcacgcagacggccatcgcctccgaagacatgcccaacacgctggccgaggccgag
aagctgatggcccagcacgagggcatcaagaacgagatccagaactacgaggaggactac
cagaagatgcgggacatgggcgagacggtgacgcagggccagacggacgcccagtacatg
ttcctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtctcagtcccacgcctaccagctgttcctgagggacacc
aagcaggcggaggccttcctcaacaaccaggagtacgtcctggctcacactgagatgccc
accactctggagggggccgaggccgccatcaagaagcaggaagacttcatgaccaccatg
gacgccaacgaggacaagatcaatggcgtggtagaggcgggccgacggctggccagcgac
ggaaacatcaacgccgaacgcatccaggagagggtcgcctccatcgatgaaagacacaag
aagaaccgggaggcagcggtggagctgctcatgaggctgaaggacaaccgagacctccag
aagttcctgcaggactgccaggagctgtccctgtggatcagtgagaagatgctgacggcg
caggacatgacctacgatgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggctgagctgcagtccaacaaggagtggctggacaagatccagaaggacggggcg
ctgctggtgtcggagaagccagagacggaggcggtggtgaaggagaagctggcggcgctc
cagaccatgtgggaggagctggagtccaccacgcagaccaaagcccagtgtctgttcgac
gccaacaaggcggagctgttcacccagagctgcgccgacctggacaagtggctggccggc
ctggagggccagatccagtccgacgactacggcaaagacctgacgtccgtcaacatcctg
ctcaagaagcagcagatgctggagaaccaggtggaggtgcgtcagaaggaggtggtggag
ctgcagagccaggtgaaggccctcggtcaggaggtgaaggacgccgacgaggtggacggc
cggcggcagcttgtggagaagaagttccaggagctgctggatcccctgcggcaccgcagg
aacttcctggtggcgtccagagaagttcatcagttcacccgggacgtcgaggatgagatc
ctctgggctcaggagaggatgccgttggccacgtccaccgaccacggacacaacctgcag
acggtgcagctgctcatcaagaagaaccagacgctgcagaaggagatccagggccaccag
ccgcgcatcaacgacatcctggagcgcagccagggcctcctgcaggaccagacctccaac
agcgatgggatccggcagcgcttggccgacctgcagcagctgtgggaccagctgaaggag
gaggcggagcaacgccacgcccgcctccaggaggcccacaaagcccagcagtactacttc
gacgccgccgaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaagag
aaggccaaggatgagctgagctccgtcaccatgctgaagaagcaccagatcatggagcag
gcggtggaggactacgccgagaccgtccaccagctgtccaagaccagcaggggcctggtg
gccgacggacaccccgagagcgagcggatcagcatgcgccagtctcaggtggataagctg
tacgcagggctcaaggacctgtcggaggagaggcggggcaaactggatgagcggctccgg
ctcttccagctcaaccgggaggtggacgacctggagcagtggattgcggagcgggaggtg
gtggccgggtcgcacgagctgggtcaggactacgaacatgtcacaatgctgcaggagcgt
ttccgggagtttgcccgggacaccggcaacatcggccaggagcgcgtggacggcgtcaac
cgactggcggacgagctgatcaacaccggccacggcgacgccgccacggtggccgaatgg
aaggacgggctgaacgaggcctgggccgacctgctggagctcatcgacacgcggacgcag
atcctcgccgcctccttcgagctccacaagttctaccaagacgctaaggagatcctggct
cgcatcgcggacaaacacaagaagctccctgaggaggtgggccgagaccagaacacagtg
gagatgctgcagaggatgcacaccacctttgaacacgacatccaggctctgggaacacag
gtgcggcagctgcaggaggacgccgtgcggctgcagtcggcgtacgcgggagacaaggcc
gacgacatccagcggcgggagagcgaggtcctggaggcctggaggactctgctggaggcc
tgcgatggacgcagggtccgcctcctcgacactggagacaagttccgtttcttcagcatg
gtccgggatctgatgctgtggatggaggacgtgatccggctcatcgaggcccaggagaat
cccagagacgtgtcatcggtggagctgctgatgaacaaccatcagggcatcaaggcggag
atcgacgcccgtaacgacagcttcaccgcctgcatcgagttggggaaggcgctgctggcc
aggaagcactacgcctccgaggagatcaaagagaagttgctgcagctgacggacaagagg
aaggagatgattgacaagtgggaggacagatgggagtggctgcgcctcatcctggaggtg
caccagttttcccgggatgcgggcgtggccgaggcctggctgctgggtcaggagccctac
ctgtccagcagtctgatggggcagagcgtggacgaggtggagaagctcatcaaacgccat
gaggccttcgagaagtcggctgccacatgggaggagcgcttctccgccctggagaggctg
accacgctggagctgctggaggtgaggcgacagcaggaggaggaggagcggatgaggaga
ccccccactccagaaccagccctggtccagaaggaggagcctctgcaggaaagcgccgtc
acccagaacggactcgcctcggaccaggactctccccgggacgcggtggacggcgtagac
atggtgaacggcgtcatcgagcgcagctccaaggagccgagccccaccccctcgcccact
cttggcaggaagagtaagagcagccagtcgtccacgctgccctccaggaaccaggactcc
atctcccagatggaggggctgctgcaccgcaaacacgagtgggagggccacaacaagaag
gcctccaacaggtcgtggcacaacgtgtactgcgtcatcagtaaccaggaaatgggcttc
tacaaggacagcaaggcggtggctcaggggagcgcctaccacaacgagacccccgtcagc
ctgaaggacgccgcctgtgacgtcgcctccgactacaagaagaagaaacacgtcttcaaa
ctcagagccgccgatggaaacgagtatctgttccaagccaaagatgaagaggagatgagc
acctggatccaggccatcctgaacgccagcgcgaccgacctccccgacacacagagcagc
aaccccggcacgccggcttctgtgcgcgctcagacgctgccggcctccatcactgtcacc
accgagtcgagtcccggcaagagagagaaggaccgggagaaggacaaggagaagcgcttc
agcctgttcaagaagaagcagtag
DBGET
integrated database retrieval system
