Cololabis saira (Pacific saury): 133445817
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Entry
133445817 CDS
T09849
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133445817 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133445817 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133445817 (sptbn1)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133445817 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
133445817 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
BORCS6
PH_11
DUF7854
Motif
Other DBs
NCBI-GeneID:
133445817
NCBI-ProteinID:
XP_061579276
LinkDB
All DBs
Position
1:complement(40883645..40936870)
Genome browser
AA seq
2347 aa
AA seq
DB search
MMTTVAADYDHMELQQQYSSSDTVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTSLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAL
ETEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLMGVQQQLQAFNTYRTVEKPPKFVE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVSVARELETERYHDIKRVAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVSTNASKYSVSD
SGYKPCDPQVIQDRVSHLEFSYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWMREKE
QILSSMEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQAMVQADHFGSAKIQER
IADLQAQWAALEQLAAGRKRRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAAALPKEEAESEDVRGRLAGIEERYKEVAELT
KLRKQVLQDALALYKMLSEANACEVWIDEKEQWLNNMEIPEKLEDLEVVQHRFESLEPEM
NNQASRVAVVNQIARQLIHNGHPSEKDIKTQQDKLNNRWGQFRDLVDQKKESLNSALGVQ
NYHLECNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTSMERDLAAIEDKLGDLRGE
AQRLAEEHPDQAKAITGRLAEITAVWEDMKNTLKTREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGETVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
TTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINAERIQERVASIDERHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGALLVSEKPETEAVVKEKLAALQTMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLAGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQKEVVE
LQSQVKALGQEVKDADEVDGRRQLVEKKFQELLDPLRHRRNFLVASREVHQFTRDVEDEI
LWAQERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRINDILERSQGLLQDQTSN
SDGIRQRLADLQQLWDQLKEEAEQRHARLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSSVTMLKKHQIMEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDGVNRLADELINTGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYQDAKEILARIADKHKKLPEEVGRDQNTVEMLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRTLLEACDGRRVRLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSSLMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRR
PPTPEPALVQKEEPLQESAVTQNGLASDQDSPRDAVDGVDMVNGVIERSSKEPSPTPSPT
LGRKSKSSQSSTLPSRNQDSISQMEGLLHRKHEWEGHNKKASNRSWHNVYCVISNQEMGF
YKDSKAVAQGSAYHNETPVSLKDAACDVASDYKKKKHVFKLRAADGNEYLFQAKDEEEMS
TWIQAILNASATDLPDTQSSNPGTPASVRAQTLPASITVTTESSPGKREKDREKDKEKRF
SLFKKKQ
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaacggtggccgccgactacgaccacatggagctgcagcagcagtacagcagc
agcgacacggtcaacaaccgatgggaggatgagtgggacaacgaaaacagctcagcccgc
ctctttgaacgctcccgcatcaaggcgctcgcagatgagagggaggcggtgcagaagaag
accttcaccaagtgggtcaactcccacctgtccagagtgtcctgcaggatcacggacctg
tacatggacctgagagatggacggatgctcatcaagctgctggaggttctgtccggggag
agactgccgaagcccaccaaaggccggatgcggatccactgtctggagaatgtggacaaa
gctctgcagttcctgaaggagcagcgggtccacctggagaacatgggatcccatgacatc
gtggatggaaaccaccgcctaacgctgggcctcatctggaccatcatcctccgcttccag
attcaagacatcagcgtggaaactgaagacaacaaggagaagcggtcggccaaagacgcc
ctgctgctctggtgtcagatgaagacggctgggtatcccaacgtcaacatccacaacttc
accaccagctggagagacggcatggccttcaacgcgctcatccacaagcacaggcctgat
ctgatcgactttgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttc
aacctggccgagcagcacctgggcctgaccagtctgctggacccagaagatatcagcgtg
gatcatcccgatgagaagtccgtcatcacctacgtggtgacgtactaccactacttctcc
aagatgaaggcgctgaaggtggagggcaaacggatcggaaaggtcttggacaacgccctt
gagacggagaagatggtcgagaagtacgagtctctggcgtcggacctgctggagtggatc
gagcagaccatcatcatcctcaacaacaggaagttcgccaactctctgatgggggtccag
cagcagctgcaggccttcaacacgtaccggaccgtggagaagccgcccaagttcgtggag
aaggggaacctggaggttctgctcttcaccatccagagtaagatgagagccaacaaccag
aaggtgtacatgccgcgcgagggaaagctcatctccgacatcaacaaggcatgggagcgc
ctggagaaggcggagcacgagcgggagctggctctgaggacggagctcatccgccaggag
aagctggagcagctggcccgacgcttcgaccgcaaggcagccatgagggagacctggctc
agcgagaaccagagactggtgtcccaggacaactttggctttgaccttcaggcggttgaa
gcagctaccaagaagcacgaggcgattgagacggacattgcagcgtacgaagagcgcgtc
caggcggtggtttccgtggcgagggagctggaaacggagcgctaccatgacatcaagcgc
gttgcagccaggaaggacaacgtcatccgactgtgggagtacctgctggagctgctgaag
gcgcgcaggcagaggctggagatgaacctgggcctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgttgctcctgtctcaggattatgggaag
catctgttgggggtggaggacctgctgcagaaacacgccctggtggaggccgacatcgcc
atccaggccgacagggtgaaggccgtgtccaccaacgccagcaagtactccgtctctgac
agcggctacaagccatgtgaccctcaggtgatccaggaccgagtgtcccacctggagttc
tcctaccaggaactgacccagttggctgctgagcgccgtgcccgtctggaggagtctcgc
cgcctctggaagtttttctgggagatggcggaggaggagggttggatgcgtgagaaggag
cagatcctgtcctccatggagcatgggaaggacctgacgggggcgctgcgcctcctcagc
cagcagcgcgccctggaggacgagatgagcggccgcgccggccacctgcagcacaccatc
gccgaaggccaggccatggtgcaggcggatcacttcggctcagccaagatccaggagcgc
atcgccgacctgcaggcgcagtgggcggcgctggagcagctggctgccgggaggaagagg
aggctggaggaggctctggccctgcaccagttccaggctgacgccgacgacgtcgacgcc
tggacgctggacgcgctgcgcatcgtctccagcggagagacgggccacgacgagttctcc
acccaggcgctggtcaggaaacacaaggacgcggcagcggaggtggccagctaccggccc
gtcatcgatgcgctacacgagcaggccgccgcgctgcccaaggaggaggcggagtcagag
gacgtgcgcggacggttggctgggattgaggagcgctacaaggaggtggcggagctgacg
aagctgaggaagcaggtgctgcaggacgcgctggcactctacaagatgttgagtgaagct
aacgcctgcgaggtctggatcgacgagaaggagcagtggctcaacaacatggagatcccc
gaaaaactggaggacctggaagtcgtccagcacaggtttgagagtctggagccagagatg
aacaaccaagcgtcccgtgtggccgtggtgaaccagatcgcccggcagctgatacacaac
ggtcacccgagcgagaaggacatcaagacccagcaggacaagctcaacaacaggtggggc
cagttccgggacctggtggaccagaagaaggagtccctgaactcggctctgggtgtgcag
aactaccaccttgagtgcaacgagaccaagtcctggatcaaagagaagaccaaagtcatc
gagtccacccaggagctgggcaacgacttgaccggggtcatggccctgcagcgcaaactg
accagcatggagcgggacctggccgccatcgaggacaagctgggcgacctgcgaggagaa
gcccagcggctggccgaggagcaccccgaccaggccaaggccatcacgggccgcctggct
gagatcaccgccgtctgggaggacatgaagaacactctgaagacccgcgaggagtctctg
ggggaagccaggaagcttcagcagttcctgcgagagctggacgacttccagtcctggctg
tcccgcacgcagacggccatcgcctccgaagacatgcccaacacgctggccgaggccgag
aagctgatggcccagcacgagggcatcaagaacgagatccagaactacgaggaggactac
cagaagatgcgggacatgggcgagacggtgacgcagggccagacggacgcccagtacatg
ttcctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtctcagtcccacgcctaccagctgttcctgagggacacc
aagcaggcggaggccttcctcaacaaccaggagtacgtcctggctcacactgagatgccc
accactctggagggggccgaggccgccatcaagaagcaggaagacttcatgaccaccatg
gacgccaacgaggacaagatcaatggcgtggtagaggcgggccgacggctggccagcgac
ggaaacatcaacgccgaacgcatccaggagagggtcgcctccatcgatgaaagacacaag
aagaaccgggaggcagcggtggagctgctcatgaggctgaaggacaaccgagacctccag
aagttcctgcaggactgccaggagctgtccctgtggatcagtgagaagatgctgacggcg
caggacatgacctacgatgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggctgagctgcagtccaacaaggagtggctggacaagatccagaaggacggggcg
ctgctggtgtcggagaagccagagacggaggcggtggtgaaggagaagctggcggcgctc
cagaccatgtgggaggagctggagtccaccacgcagaccaaagcccagtgtctgttcgac
gccaacaaggcggagctgttcacccagagctgcgccgacctggacaagtggctggccggc
ctggagggccagatccagtccgacgactacggcaaagacctgacgtccgtcaacatcctg
ctcaagaagcagcagatgctggagaaccaggtggaggtgcgtcagaaggaggtggtggag
ctgcagagccaggtgaaggccctcggtcaggaggtgaaggacgccgacgaggtggacggc
cggcggcagcttgtggagaagaagttccaggagctgctggatcccctgcggcaccgcagg
aacttcctggtggcgtccagagaagttcatcagttcacccgggacgtcgaggatgagatc
ctctgggctcaggagaggatgccgttggccacgtccaccgaccacggacacaacctgcag
acggtgcagctgctcatcaagaagaaccagacgctgcagaaggagatccagggccaccag
ccgcgcatcaacgacatcctggagcgcagccagggcctcctgcaggaccagacctccaac
agcgatgggatccggcagcgcttggccgacctgcagcagctgtgggaccagctgaaggag
gaggcggagcaacgccacgcccgcctccaggaggcccacaaagcccagcagtactacttc
gacgccgccgaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaagag
aaggccaaggatgagctgagctccgtcaccatgctgaagaagcaccagatcatggagcag
gcggtggaggactacgccgagaccgtccaccagctgtccaagaccagcaggggcctggtg
gccgacggacaccccgagagcgagcggatcagcatgcgccagtctcaggtggataagctg
tacgcagggctcaaggacctgtcggaggagaggcggggcaaactggatgagcggctccgg
ctcttccagctcaaccgggaggtggacgacctggagcagtggattgcggagcgggaggtg
gtggccgggtcgcacgagctgggtcaggactacgaacatgtcacaatgctgcaggagcgt
ttccgggagtttgcccgggacaccggcaacatcggccaggagcgcgtggacggcgtcaac
cgactggcggacgagctgatcaacaccggccacggcgacgccgccacggtggccgaatgg
aaggacgggctgaacgaggcctgggccgacctgctggagctcatcgacacgcggacgcag
atcctcgccgcctccttcgagctccacaagttctaccaagacgctaaggagatcctggct
cgcatcgcggacaaacacaagaagctccctgaggaggtgggccgagaccagaacacagtg
gagatgctgcagaggatgcacaccacctttgaacacgacatccaggctctgggaacacag
gtgcggcagctgcaggaggacgccgtgcggctgcagtcggcgtacgcgggagacaaggcc
gacgacatccagcggcgggagagcgaggtcctggaggcctggaggactctgctggaggcc
tgcgatggacgcagggtccgcctcctcgacactggagacaagttccgtttcttcagcatg
gtccgggatctgatgctgtggatggaggacgtgatccggctcatcgaggcccaggagaat
cccagagacgtgtcatcggtggagctgctgatgaacaaccatcagggcatcaaggcggag
atcgacgcccgtaacgacagcttcaccgcctgcatcgagttggggaaggcgctgctggcc
aggaagcactacgcctccgaggagatcaaagagaagttgctgcagctgacggacaagagg
aaggagatgattgacaagtgggaggacagatgggagtggctgcgcctcatcctggaggtg
caccagttttcccgggatgcgggcgtggccgaggcctggctgctgggtcaggagccctac
ctgtccagcagtctgatggggcagagcgtggacgaggtggagaagctcatcaaacgccat
gaggccttcgagaagtcggctgccacatgggaggagcgcttctccgccctggagaggctg
accacgctggagctgctggaggtgaggcgacagcaggaggaggaggagcggatgaggaga
ccccccactccagaaccagccctggtccagaaggaggagcctctgcaggaaagcgccgtc
acccagaacggactcgcctcggaccaggactctccccgggacgcggtggacggcgtagac
atggtgaacggcgtcatcgagcgcagctccaaggagccgagccccaccccctcgcccact
cttggcaggaagagtaagagcagccagtcgtccacgctgccctccaggaaccaggactcc
atctcccagatggaggggctgctgcaccgcaaacacgagtgggagggccacaacaagaag
gcctccaacaggtcgtggcacaacgtgtactgcgtcatcagtaaccaggaaatgggcttc
tacaaggacagcaaggcggtggctcaggggagcgcctaccacaacgagacccccgtcagc
ctgaaggacgccgcctgtgacgtcgcctccgactacaagaagaagaaacacgtcttcaaa
ctcagagccgccgatggaaacgagtatctgttccaagccaaagatgaagaggagatgagc
acctggatccaggccatcctgaacgccagcgcgaccgacctccccgacacacagagcagc
aaccccggcacgccggcttctgtgcgcgctcagacgctgccggcctccatcactgtcacc
accgagtcgagtcccggcaagagagagaaggaccgggagaaggacaaggagaagcgcttc
agcctgttcaagaagaagcagtag
DBGET
integrated database retrieval system
