Cololabis saira (Pacific saury): 133446000
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Entry
133446000 CDS
T09849
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta
KO
K12897
transformer-2 protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133446000 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133446000 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133446000 (tra2b)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133446000 (tra2b)
Spliceosome [BR:
csai03041
]
Common components
Common spliceosomal components
SR proteins
133446000 (tra2b)
BRITE hierarchy
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
133446000
NCBI-ProteinID:
XP_061579638
LinkDB
All DBs
Position
6:21557895..21564114
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AA seq
278 aa
AA seq
DB search
MSDNDKGRESRSASRSLSPRESRKSASRSLTHSPAGSKDGSRRSRSRSKSRSHSYHGSRR
YHSRSRSRSRSDRRRSHSRSYSGERRRRSHSHSPMSNRRRHIGNRANPDPNCCLGVFGLS
LHTTERDLKDVFTKYGPLADVSIVCDQQSRRSRGFAFVYFENNQDAKEAKERANGMELDG
RRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGGGGGPSGPRRHPREYDRGYDRGYDRGYD
RYDDREYYRSYRRRSPSPYYRGAYRSRSRSRSYSPRRY
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataacgacaaaggaagggagtctcgctccgcttccaggagcttgagtccgcgg
gaatctaggaagtcggcaagccggtccctcactcattcacccgccggttcgaaagatggc
tcccgccgctctcgctccaggtctaaatctcgctcccattcttaccacggctcacggaga
taccacagccgatctcggtcccgctcgaggtccgaccgccggcggtctcacagcaggtcc
tacagtggagagcgccggcgcaggagccacagtcactctccgatgtccaaccgtcgcagg
cacatcgggaaccgggctaatccggatccaaactgttgcctgggagtgtttggcctgagc
ttgcacaccaccgaacgggacctgaaggacgtcttcaccaaatacgggccccttgcggac
gtctccatcgtgtgcgaccagcagtccagacgctccaggggatttgctttcgtttacttt
gagaacaaccaggatgctaaagaggcgaaggagcgagccaatggcatggagttggacggt
cgtcgaatccgggtggatttctccatcacgaaaagacctcacaccccgaccccggggatc
tacatggggagacccacatatggtggtggtggaggtggtggaggcggtcccagcggtcct
cggcgacatccacgagagtacgatcgtggatatgacagaggatatgacagaggatatgat
cgctatgacgacagggaatactacagatcctacagacggcgatctccatcaccatactac
agaggagcgtacaggtctcggtcaagatcccgctcctattctccccgtcgctattga
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integrated database retrieval system
