Cololabis saira (Pacific saury): 133446076 Help Entry 133446076         CDS       T09849                                  Symbol sympk Name (RefSeq) symplekin   KO K06100   symplekin Organism csai  Cololabis saira (Pacific saury) Pathway csai03015   mRNA surveillance pathway csai04530   Tight junction Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     133446076 (sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     133446076 (sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csai03021]     133446076 (sympk)    03019 Messenger RNA biogenesis [BR:csai03019]     133446076 (sympk) Transcription machinery [BR:csai03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      133446076 (sympk) Messenger RNA biogenesis [BR:csai03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      133446076 (sympk)     U7-dependent histone pre-mRNA processing factors      133446076 (sympk) SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_MROH2B_C PDS5 Adaptin_N Motif Other DBs NCBI-GeneID:  133446076 NCBI-ProteinID:  XP_061579820 LinkDB All DBs Position 6 Genome browser AA seq 1214 aa AA seqDB search MDLSSKKGGTPNPVDMTTSEKVVELLNQAALMTTDEKLNVLKQVQELIINKDPSLLDNFL DEMIAFQTDKSIEVRKFVIGFIEEACKRDNELLLRLIANLNMLLKDDSVNVVKKAILTLT QLYKVTLQWLVRSKAVTEMQEPCWDLVTQMKEEVLALLDSENDGVRTHAIKFTESLIITL SPRGSDSDVPKRQEGDISLDKVPKDHSYIRYDALCEEGKTALEKLLKFMVHPAISSINLT TALGSLATIARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLKLHLVAVLKHPCS VEFQGQISTLLLDLGMPQSEITRYTPAPREQRKRPRYDQYTEGKKVKMEPMEDDEDKEEP AQLSAPKPVVVPVAQSAIDLTAEFLHPLLSPENVANLVLISMVYLPDVMPASFQATYTPV ESAGTDAQIKHLARLMATQMTAAGIGPGLEQCKAREDEAVKGETSEDGNSKDTLIKRKVP PMMGQAISVVGGYSDKPPTTEAPTAVKRLPEPILPSAQTKMTGASGRKKVFRLSDVVQPL SDTHIEQSTSKAVKRILHSEKAIAQSGMSHVRVKLLSRLVTQFEGMMKEDVLEFILDDIR GRSDLAFSLLYQEYNTYLSQLPSGLLDSYDHCLFTLLSGLQEKPEQRDGLFTKLVLEAPI ITESALDVIRRYCEDESRVYLGMTTLKELIIKRPSRQFQYLHVLLDLSSHEKEKVRTTAL AFLKRMYEKDQLRDYIEKFALNYMQLLVHPNPPSLLFGADKDTEVAAPWTEETVRQCLFL YLSLLPLNHRLVHELASVYTEAIADIKRSVLRAIEQPIRGMGMNSPELLLLVENCPKGAE TLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVINGLEKNEVIQALPKLIKL NPIVVKEVFNRLLGTQHSEGSSSVSPLTPGDLLISLHNIDSAKCDMKSIIKATNLCFGEK NVYTSEVLAVVMQQLMEQNPLPILLMRTVIQSLTMYPRLVGFVMNILSRLIVKQVWKYPK VWEGFVKCCQRTKPQSYSVLLQLPPAQMTSVFERCPELRAPLLQHVHSFTPHQQAHIPSS IMAVLEADKKPEPKPVEQIIGNEMEAAPAVSLLEETQITAQTELDMSAHPEPPIMKDYEE PMEQEEADPVIQEENDESIPQVDLEKTADTPPPHSEMTEEPMEEPEPSNHQDHPEDSEAN VTGAEAGSGCEDAE NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atggatctttcctcaaagaagggaggaactcccaatcccgtggatatgaccaccagtgag aaggttgtggagctcctgaatcaggctgctctcatgaccacagatgaaaagctaaatgtt ctcaaacaggttcaggagcttatcatcaacaaggatccatctcttcttgacaattttctg gatgagatgattgctttccagactgacaagtctattgaagtgagaaaatttgtaattgga tttattgaggaagcatgtaaaagggacaatgagcttctactcagactcatcgccaacctg aacatgttgctgaaagatgatagtgtgaatgtggtgaagaaagccatccttacactgact cagctgtacaaagttacactgcagtggttggtccgctccaaagcggtaacagagatgcag gagccatgctgggatttggtcacacaaatgaaagaggaagttctggccttgctggactct gagaatgacggcgttcgcactcacgccatcaagtttactgaatcattgatcatcactctt tcaccacggggttctgattctgatgtccccaaacggcaggaaggggacatcagtctggac aaagttcccaaggaccattcatacatacgctatgatgctttgtgtgaggagggaaagact gccttggagaagctgttgaagttcatggtccatccggctatttccagtatcaacctcaca acagcactcggttccctggccaccatcgctcgtcagaggccgatgttcatgtcagaagtg gttcaggcgtatgaaacactgcatgcaaacctaccccccactctggccaagtctcaggtc agcagtgttcgaaaaaatctgaagctgcacttggtggcagttctcaaacatccgtgcagc gtggagttccagggtcaaatcagcaccctgctgctggatctgggaatgccccagagcgag atcacccgatacacaccggcgccgcgtgagcagcgcaaaaggccacgttatgatcaatac acagagggaaaaaaggtcaagatggagccgatggaagacgacgaggacaaggaagagcca gctcagctctcggctcccaaaccagttgttgttcctgtcgcacagtctgccattgacctc acagccgagttcctgcatccactgctgagccctgagaacgtcgccaaccttgtgctcatc agcatggtgtacctgcccgatgtcatgccagcatctttccaggccacatacacacctgtt gaatcagcaggtactgatgcccaaattaaacatctagccaggctgatggctacccagatg actgcagctgggattggtccaggacttgaacagtgcaaagcaagagaggatgaagcagtc aaaggagaaacaagtgaggatggaaactctaaagacacgctcatcaagcgcaaagttcca cctatgatgggccaagccatctcggtggtggggggttacagtgataaacctcccaccaca gaagctcccactgcggtcaagagacttcctgagcccatccttccatctgctcaaaccaag atgacgggggcgagtgggagaaagaaagtgtttcggttatccgacgttgtccagccttta tcagacactcacattgagcagtcaacttcgaaagcagtgaagaggattctgcattcagag aaggcaattgcacaaagcggaatgtcccatgtcagggtgaagctcctttccagacttgtg acgcagtttgaaggaatgatgaaagaagacgtgctggagtttattctggatgatatccgg gggagaagcgacttggcgttttctcttctctaccaagaatacaacacctacctcagccag ctgccgtcagggctgctggacagctacgaccactgtctcttcacactactgtcaggcctg caagagaaaccagagcagagggatggactttttaccaagctggtactggaggctcccatt ataacagaatcagcattggatgtgatacgtcgatactgtgaggacgagtctcgggtgtat ttgggcatgacgactctgaaggagctcatcatcaaacggccgtccaggcagtttcaatat ctgcatgtccttctggacctgagctcacacgagaaagagaaggtacggaccactgccttg gcttttctaaagcgcatgtatgagaaagaccaactcagggactacatagagaagtttgcg ctaaactacatgcagcttctggttcacccgaatcctccatctctgctgtttggggctgac aaagatacagaggtggctgcgccctggactgaggagacggtgagacagtgtctattcctc tacttgtccctgcttcctctgaaccaccggctggtccatgagctcgcgtctgtctacact gaagccattgctgacatcaaacgcagcgtgcttcgagccatagaacagcctatccgtgga atggggatgaactctccagagctgctgctgttggttgaaaactgccccaaaggagcagaa actctggtgactcgctgcctccacattctgactgataaagtgcctccatcaccagagctg gtggagagagtgcgagacctttaccacaaacgagtcccagatgttcgctttctcatccct gtcatcaatggtctagaaaagaatgaagtcatccaagccctcccaaagctcatcaaactt aacccaatcgtcgtcaaggaagtgttcaacagactcctgggaactcagcacagtgaggga agctcctctgtgtcccctctcaccccaggagacctgctcatttccttacacaacatcgac tcagccaaatgcgacatgaagtcaatcataaaagctaccaacctgtgcttcggagagaaa aacgtgtacacatcagaagtgttggccgtggtgatgcagcagctgatggagcagaatcct ctccccatcctgctcatgcgtaccgtcatccagtcactcaccatgtatcccagattggtt gggtttgtcatgaacatcctgtcccgcctcattgtcaagcaggtgtggaagtatcccaag gtatgggaaggatttgtgaagtgctgccagcggacaaagcctcagtcttacagcgtgctc cttcagcttccgcccgcacagatgacgagcgtgtttgaacgctgtccggaattaagagcg cctcttctccagcatgtccactcttttacgcctcatcagcaagctcacataccttcctcc atcatggcagtcttggaagcagataaaaaaccagagccaaagcctgtggagcaaatcata gggaacgagatggaagctgctccagccgtctcacttttggaagagactcaaatcacagca cagacagagctagacatgtctgcccacccagagccacccataatgaaagattatgaggaa ccaatggagcaagaggaggctgatccagtgatacaggaagaaaatgatgaaagtattcca caggttgatttggaaaaaacagctgatacaccaccacctcactcagagatgaccgaagaa ccgatggaggaacctgaaccatcaaaccaccaggaccaccctgaagacagtgaagctaac gtcacaggagctgaggctggaagtggctgtgaggatgcagaatga

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