Cololabis saira (Pacific saury): 133446087
Help
Entry
133446087 CDS
T09849
Symbol
pms1
Name
(RefSeq) LOW QUALITY PROTEIN: PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133446087 (pms1)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
133446087 (pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HMG_box_2
HATPase_c
HMG_WDHD1
COMM_domain
Motif
Other DBs
NCBI-GeneID:
133446087
NCBI-ProteinID:
XP_061579843
LinkDB
All DBs
Position
6:26816779..26835226
Genome browser
AA seq
916 aa
AA seq
DB search
MKQLPPETARLLSSSQVITSVVNVVKELIENSLDAGASSIDVKLDNYGLDRIEVRDNGHG
IKAGDTPVMAVRHFTSKICSHEDLEQLETYGFRGEALGSVCAVAEVAVTTKTEEDDISTQ
YMLDLTGKIVSQKPSHLGQGTSVSVMKLFKNLPVRRQYYSSTKKCKDELKKMQDLLMAYA
ILKPELRLMLVHNKVVLWQKARAADTRSVLLATLGSTTVANLLPCHQRQEQLEITLDGFF
PKPGADLCSTSSSTPDKTFIFVNNRPVHQKEIMKLLRQHFSAQYSDDAARNRYPTLVLKI
TVHSPSSVDVNLTPDKTQVLLHDKEAVLTAVEALLVSLYGFRPTADLPAEKPPSHDTIPS
PSGPLQTDVLPVEKEGNKDRHTSLTSFNGISPADKTLSAASTDALLDRQPSNCSSSSSIA
DDWIVNQIPVELHSNFSLYDDEMDKRCTHDTETGTGSKSPENLADNEVSASEASKDQISA
EDWSRGTVLTDPTTGEPLQPIIIHQPTKHSHSDSDEAKSQSGSGKKMFNAITEKRAALTA
YDMICNRAMRAPLTPAALFEKEARAEVLRESPNASLQDISISVNERWKNLGEEERKKYEE
KAKKHLEHHGERTKLASAEGPGEPAGSTLRGQIQGQKRKAPASNQQLLDELFTAQPQKKL
RNPASKPSQPLPCSIAALRLQLQRLSSQSSAAPQGLRLVNRLASQSAWVILCGQRLMLLN
PFRVEETLLFKRLLENNILPAVSLENPVQLTDGSLGGAEYTKALCNMEKQNPDLHGGTFF
SDSRLVANGFRIKLTPGLMSAERHLEVTAMANCVPFLGVEDLREILTAVLHRKASTVKDC
RPLKVTNYLQGEAVRLARQLPANLSREDVEETLRRMKQQLGETNRTCIHGRPFLQHLTDV
PSTDKEATSLFRSLDL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctcccaccagaaactgcacgactcctgtccagctcccaggtcatcacttct
gtggtgaatgttgtgaaagaacttattgagaattccctggatgctggagcttcaagcatt
gacgtgaaactggataactatggtttggatcgtatagaagtacgcgacaatggccatgga
atcaaagctggagatactcctgtgatggctgtaagacatttcacctcaaagatctgtagc
catgaagatttagagcagctggaaacatatggcttcaggggggaggcactgggctccgtc
tgcgctgtggctgaggtggctgttaccacgaagacggaggaagatgacatcagcacccag
tacatgctggacctcacagggaaaatagtttcacagaagccgtctcacctaggtcaaggt
acatcagtgagtgtgatgaagcttttcaagaaccttccagtgagaagacagtactactcc
tccacaaagaagtgcaaggatgaactgaagaaaatgcaggacctgctgatggcttacgcc
attttaaaacctgagctgaggctaatgctagttcacaataaggtggtgctttggcagaag
gccagggctgctgataccagaagtgtgctcctcgccaccctgggctccactactgttgct
aacctgctcccatgtcaccagcgccaggagcagctggagattactttagatggctttttt
ccaaagcctggagctgacctctgctctacaagctcatctacccctgacaaaacatttata
tttgtcaataaccggccagtccatcaaaaggagataatgaagctgttgcgccaacacttc
tctgctcagtactcggacgacgcagccagaaatcgatatcccacccttgtgctgaaaatc
acagtccacagtcccagttctgtggatgtaaatctaacgccggacaagacacaggttctt
cttcatgacaaggaggctgtgttgactgcagtagaggcattgctggtttctctgtacggg
tttcggcctaccgctgacctcccagctgagaagccgccgagccatgacacaattccatca
ccatctggtcctttgcagaccgatgttttacctgtggaaaaagagggaaacaaagacagg
cataccagtctcaccagctttaatggcatttcacctgctgacaaaactctatcagctgca
agcactgatgctttacttgatcgtcagccctcgaactgtagctcttcatcgtctatagca
gatgactggatagtcaaccagatcccagttgagctccactcgaacttttccctgtatgat
gatgaaatggataaaaggtgcactcatgatacagaaaccggtacagggagcaaatctccg
gagaatcttgcagacaatgaagtatcagcttcagaagccagtaaagatcagatatcagct
gaggactggagtcgggggacagttctgaccgaccctacaacaggagaacctctgcagccc
atcataattcaccagcccacgaagcacagtcattctgattctgacgaggcaaaaagtcag
agcggctcaggcaaaaagatgttcaacgcaataacggagaaacgagctgccctgacagcc
tacgacatgatctgcaatcgtgccatgagggctccgctgactcctgctgccctgtttgag
aaagaggccagagctgaggtccttagggagagccccaatgccagcctgcaggatatcagc
atctctgttaacgagaggtggaaaaatctgggggaggaagagcgtaagaagtacgaggaa
aaagcaaaaaaacacctggaacaccatggcgagaggaccaagttggcctcagcagaaggc
cctggggaacccgctgggagcaccctgagggggcaaatacagggtcagaaacgcaaggcc
ccggcgtccaaccagcagctgcttgatgagctcttcactgcacagccccaaaagaagtta
agaaaccctgcgagtaagccctcgcagcccctcccgtgcagtatagccgctcttcgcctt
cagcttcagcgcctctcatcccagagcagcgcagcgccgcagggcctccgtcttgtaaac
cggctggcctctcagagcgcctgggtcattttatgtggtcagaggctcatgttgttaaac
ccatttcgagtggaggagaccttgctgtttaagagacttctagagaataatatacttcca
gcagtgagtctggagaaccctgtacagttaacagatggaagtcttgggggagctgaatat
acgaaggctttgtgcaacatggagaagcaaaaccctgacctgcatggagggaccttcttt
tctgattccagacttgtggctaatgggtttagaatcaaactcactccaggcctcatgtca
gccgagagacatctggaagtgacagcgatggcaaactgtgtgccttttctcggtgtggag
gacctcagagagatcctgacagcagttcttcacaggaaggcctcgactgttaaagactgc
cggccgcttaaagttacaaactacttacaaggagaggcagttcgactggcccgtcagctg
cctgcaaatttatctcgggaagacgtggaggaaactctccggcggatgaagcagcagctg
ggtgagaccaaccggacctgcatccacggacgaccgtttctccaacacctaacggatgtt
ccctccacagacaaggaagcaacatctctgttcaggtctttagatttgtaa
DBGET
integrated database retrieval system
