Cololabis saira (Pacific saury): 133446122
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Entry
133446122 CDS
T09849
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
133446122 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133446122 (hdac4)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
133446122 (hdac4)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
133446122 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
133446122
NCBI-ProteinID:
XP_061579919
LinkDB
All DBs
Position
6:30961303..31137414
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AA seq
1108 aa
AA seq
DB search
MSSHSRQVDVSTAALPSQVSPTTTAILPMDLRVVDHSHLRHHHHHQQPPFDLVSQPHAIP
VPSAASPASSEAGHGMVINQQEQHLQQELVALKHKQQLQRQLLIAEFQRQHEQLSRQHEA
QLQDHVKHQQDLLALKHQEELLEYHRKMEQQRHEQQLEKQHREHKLQQLKNKERGQENGR
NRSDSWTMLPKSAVASTEVKMRLQEFVLNKKKALAQRNLNHCLPSDPRYWYGKTQHSSLD
QSSPPQAALSAYNHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKD
GAITTAKKRSLDVAESACNSAPGSGPSSPNNSSSNIPSENGIPVSSSHGEASLLQRLAAR
EGPVSQLSLYTSPSLPNITLGLPATGSASTVVPGHQDGESHLALPALQQGIPLTPSFLPT
AHLPSYLASTALDREGAGGGPAGHNPLLQHMVLLDQSHSPMVGLAGLPLSSSTVSKLVRG
HRPLGRTQSAPLPQQPCGQTQALQQLVVQQQHQQFLEKHKQLFQQQQQHLINKIMSKPGD
QVSAAGPSASVPGRQHQSHPEETEEELREHQGLSSSSSSSSSTSAQETRLPRGVIIKQEP
PDPEEQEDLRERQAEQDFLFTQQALLLEQQRIHQLRNYQASIEDGGPPVSMAAHRPLSRA
QSSPASACFPMAVQEPSAKHRFTTGLVYDSLMQKHQCVCGNATIHPEHAGRIQSIWSRLQ
ETGLRAHCECIRGRKASLEELQSVHSEAHVLLYGTNPLRQKLDCSVQPMFVRLPCGGIGV
DSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAIVRPPGHHAEESTPMGFCYFN
SVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPSVLYLSLHRYDDGNFFPGSGA
PDEVGSGAGAGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDMVLVSSGFDAV
DGHAPPLGGYKVSAKCFGYLTRQLMGLAGGRLVLALEGGHDLTAICDASEACISALLGNE
LEPISDEVLQQRPNANAVQSLERVIDFHSKYWHSLQRSTSTLGRSLSEVLQRDAEEAETV
SAMALLSVANKHIGKRAEEEPMEEEAQM
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacagtcgacaagtggatgtgagcacagcggcgctgccctcgcaggtttcc
cccaccaccacagccatccttcccatggacctgcgtgttgtggaccactctcacctccgc
caccaccaccaccaccagcagcctccctttgacctggtctcccagccccacgccataccc
gtgccctccgcagcttctcccgcctcatctgaggccggccatgggatggtcatcaaccag
caggagcagcacctgcagcaagaactggtggctctcaaacacaaacagcagctccagagg
cagctactgatcgcagagtttcagaggcagcatgagcagctgtcgcgacaacacgaggcc
cagctgcaggaccatgttaagcaccaacaggacttattggcgctcaagcatcaagaagag
ctgttggagtatcacaggaagatggagcaacaacgtcacgagcagcagctggagaagcag
caccgggaacacaaactccagcagctcaaaaacaaggagagggggcaagagaatggcagg
aacagaagcgacagctggacgatgcttcctaaaagtgcagtggccagtacagaggtaaag
atgcgactgcaggaatttgtcctgaacaagaagaaagccttggctcagcgaaacctaaac
cactgtctgcccagtgacccgcgctactggtatggaaaaacacagcacagctcgttggac
cagagctcgcccccccaagctgcactgtcggcatacaaccatccaatgctgggcacgtat
gactcgaaagacgacttcccgctccgtaaaacagcgtctgaacccaacttgaagcttcgt
tctcggctaaagcagaaggtgacggagcgccgcagcagcccgctgctccgcaggaaagat
ggagcgatcaccactgccaaaaagcgttctctagatgtagctgagtctgcatgcaacagt
gcacccggttcaggccccagttcccccaacaacagctctagtaacatccccagtgagaac
gggatcccagtctccagcagccatggagaggcctctctacttcagaggctggctgccagg
gaaggtccagtcagccagctctctctctacacctcaccatctctgcccaacattacctta
ggcctaccagccacaggctctgccagcactgtggtaccgggacaccaagatggtgagagt
catctggcattgccggcattacagcagggcattccactgaccccttcatttcttcccact
gcccacctgccttcctacttggcatctacagcgctggacagggagggggcaggagggggt
ccagctggtcacaaccccctccttcagcacatggttctactggaccagagccacagtcca
atggtgggtctggctggcctgccgttgtcttcgtccaccgtgtccaagctggttcggggc
caccgtcctctggggagaacccagtcggcccccctgcctcagcagccgtgcggacagact
caggctctgcagcagctggtggtccagcagcagcatcagcagttcctggagaagcacaaa
caactgttccaacagcagcagcagcatctcatcaacaagatcatgtccaagcccggagat
caggtctcagctgcaggtcccagcgcctcggtgccgggcaggcagcatcagagtcaccca
gaggagacagaggaggagctcagggaacaccaaggactttcctcatcctcgtcgtcatct
tcctccacttctgcgcaggagacgaggctgccacggggagtcatcatcaagcaggaacca
ccagatcccgaagagcaggaagacctgagggagaggcaggccgagcaggacttcctgttc
acacagcaggcgctgctgttggagcaacagcggatccaccagttgaggaactaccaagcc
tccatagaagacggcggcccgcctgtcagtatggctgcacatcgccctctgtccagggcg
cagtcatctccagcctctgcctgctttcctatggcagtccaggagccatccgcgaagcat
cgatttactacaggtctggtctatgactctctgatgcagaagcaccagtgtgtgtgcggt
aatgccacgattcatccagagcacgctggccgtattcagagtatctggtcacgactgcag
gagacgggcctccgggcgcactgtgagtgtatccgtggcaggaaagcgtcgctggaggag
ttacagagtgtccactccgaagcccacgtcttactgtatggaacgaacccgttgcggcag
aagctcgactgttcggtccaacccatgtttgtgaggttaccatgcgggggcatcggggtg
gacagcgacaccatttggaacgaggtccactcgtccagtgcagctcgtctggccgtgggc
tccgtggtggagctggtcttcaaggtggcatcaggagagctgaagaatggctttgctatc
gttcgaccacctggacaccacgcagaggagagcacacctatgggtttttgttattttaac
tcggttgccatagcagccaagctcctgcagcagaggctcaatgtcagcaaaatcctcata
gtggactgggatgttcaccatggcaatgggactcagcaggccttctactccgaccccagt
gttctctacctgtctctgcatcgctatgacgacggtaacttcttcccgggcagcggagcc
cccgatgaggtgggcagcggagcaggtgcgggcttcaatgtgaacatggccttcaccgga
ggactggaacctcccatgggggatgcagagtatctagctgcatttagaacggtggtcatg
cccatcgccaacgagtttgccccggacatggttctggtgtcctctggcttcgatgctgta
gatggacacgccccacctcttggaggatacaaagtgtcagctaagtgctttggctacctg
accaggcagctgatgggcctggcaggcggccgcttggtgcttgccttggaggggggtcac
gacctcacagctatatgtgatgcctcggaagcctgcatctctgctctgcttggaaatgag
ttggagcccatttctgacgaagtgcttcagcagagaccgaatgccaacgccgtgcagtct
ctcgagagagtcatcgactttcacagtaaatactggcactcgctgcagcgctccacctcc
acacttggccgttcgctgagcgaagtcctccagcgcgatgcagaagaggctgaaaccgtc
tccgccatggccttgttgtctgtcgccaacaagcacatcggaaagagggctgaagaggaa
ccgatggaagaagaagctcagatgtaa
DBGET
integrated database retrieval system