KEGG   Cololabis saira (Pacific saury): 133446175
Entry
133446175         CDS       T09849                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03410  Base excision repair
csai04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133446175 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    133446175 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csai03400]
    133446175 (parp4)
DNA repair and recombination proteins [BR:csai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     133446175 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA BRCT_2 BRCT VWA_2 WGR-like_PARP4 Ribosomal_60s TniB
Other DBs
NCBI-GeneID: 133446175
NCBI-ProteinID: XP_061580074
LinkDB
Position
6
AA seq 1824 aa
MAVFENCSVLLELKGLSFKEKKKLKAAVTESGGSISFVINKQCSLVVTGDVSSLSSNRLR
SIQKHQTPVVDVAYVHHCVERGVLLPVDKYKLDTSSFSAAPLLCPPRRRSLTPHKESKVL
QTDAAADRSGERAAPRGPTLRPETPERAGFDLQKLRIYAETDLDLPPFPDCFQVAKYSVF
EQPNSCCVLELQSVAAEEGRHYRVVRTCRHATATEKPAVKDQLVFASTSEEALDVYEALR
DSLEASGLQERSSPPPQVLDLGSAPLQQLLLEEKLNTGSLSQEVGVFVELLWAESLGCLG
NILRVSLDKLSLNDVSRAEGLLLQTQKQLRAGNQAEASSLLDDVYTLLPHREPCASPPSA
RFLSQKLDLCQLIRDVLNVNEMNLWTSVPSSLGKHRALRCSIEAVAPDSSEFQDVSRRLH
GSPVQIQKIMRVSRGVELQTFKSDLGNIKPLLHSSSSKNFVGILSRGLLLPRVGVEHHGI
DRTDVGNLGSGIYFSDAMSTSLKYSKPGGTDGSRLLLVCDVALGKCRDLYRRDLTLTRAP
EGHHSVHGVRRTHNTPSDFEDDEYVVYSPDQVKLKYVVQFNVEGDELKDFSPAVNTSAPP
GRSCPDQDVSMDDDGVEVVGNPLDDVTAGLLDSSGQKLPLQAVHVKCKLMDLLSQVVIFQ
KYTNQSSVPIEAKYVFPLDDSAAVCGFEAFINGKHVVGKVKEKEKARKEYKQAIERGHGA
YLMDQDAPDVFSISVGNLPPGASVLIKVTYVSELVVRDGSILFSLPGSVAPWQESAALNQ
TTQVTVEKVCVTDEATSSKEFTLDVSVEMPHEISGLRCITHKVKMKKTECKAVVSVLPDQ
VLGPDGFQLSISLSEVHLPRMWVEKHPDKDSQACMLVFYPDFEMGSGSAAEEVILLLDTS
ESMRGGSLQHARRIALQVLRNLGGNCRLNVVLFGTDHTDAFLTARPLVEVRQAAEDFIKR
SPPAGGSTELWRPLRALSLLPPSRGVRNLLLLSDGHIQNAAFTLQLLRDGSRHSRLFTCG
LSSTANRHMLRALAQAGGGAYEFFDTKTKHNWAEKVVCQVKRMSSPGCSSVSVKWQQFNP
TAPPPVQAPRQLHALFNDCHALVYGFVPHCTQATLLGNLSGQELKTVVSTSELQKTSGTF
VHKLTARALIRDYEDGNLDTGEADHEGKKAELKSFITELSKEFSILSQFTSFVAVEERDL
EQPEDGVTDIPELVLEEDVDFLPYISWTSSQDAEMTSEDESSDDDMDFDLFTPPDAEKSI
LAQLDCVALAAREEDESSDDDMGFGLFTPPEDKIRSFDDDMDFEPDICSRMDFTLNTDGI
PTLEGTLSMPNYCPTIRSKCAIMEQSSELDEREFDPFESGDSDSEEDYAVVTTRATEGPP
MSNLDIFFQSESSAMKVPLPPPASKVQSSSIPCLSLRPPLPLRVIGSLPPRPPSFMQSSS
IPGLSLLPPLPSKIQSSSIRCRSHPLPLPVVGSLPKKMSYNRILSPSPPPPPPPSFMQSS
SICGPPPPVQQWLKPLQLSSNGSKILSVEKKLMFQGISPLIRIASSADSGYVPACLSTVS
KDDVLEDVNEIVTDSSPAVKLFGSVSLQDIVEGTKADAQALGVGCTFGAHSHPLQSPSSP
ALPPKDRYRRESEMTLKKRLPHTLKSSFLPRAACLSSERKAAELGLKWTKIFQLQKPEGY
WELTAELGELINLNVDIFVNVHLKNKGIHSLGVQAHTHILRMVATLLVLQLMRLENMEEG
KLLRTLFCLEEATRLRPKHWQEVKEAVNWVRWADHQYPCICSRLEFGLSWDSSTRQLLGY
EGLPPFSSLRGLELQKTGILLRVH
NT seq 5475 nt   +upstreamnt  +downstreamnt
atggccgtgtttgagaactgctcagttcttctggagctgaaaggtttgtccttcaaggag
aagaagaagctgaaagctgcggtgacggagagcggtggcagcatctccttcgtgattaac
aagcagtgctctctggtggtgaccggtgacgtgtccagcctgagctccaaccggttgcgc
agcatccagaagcaccagacgccggtggtggatgtggcttatgtgcaccattgtgtggag
agaggggttcttcttcctgtagataaatacaagctggacacttcatctttttcagcagct
cctcttctctgcccgccacggaggcggtctctcacccctcataaagagtccaaagtcctg
cagactgatgcagccgctgatcgatctggagagcgcgccgctcctcgcggtcctactctg
agaccagagactccggagcgagccggatttgatctgcagaagttgaggatctacgctgaa
acggacctcgatctcccaccgtttcctgactgtttccaagtggccaagtattccgtcttc
gagcagccgaacagctgttgtgttctggagctgcagagtgtcgcagcagaggagggacgg
cactaccgggtggtcagaacctgcaggcatgccacggctacggagaaaccggcagtcaaa
gaccagctggtgtttgcgtccacctccgaggaagctctggatgtctatgaggctctgagg
gactccctggaagcttcaggtctgcaggagagaagcagccccccgccgcaggtccttgac
ctgggctccgcccccctgcagcagctgctgctggaggagaagctgaacacagggagcctg
tcacaggaagtgggcgtgtttgtggagctgctgtgggcggagtctctgggctgtctcggc
aacatccttcgagtttcactggacaagctcagcctcaacgatgtcagcagggcggagggc
ttgctgcttcagactcagaagcagctgagggcggggaaccaggcggaggcctcgtctctc
ctggacgatgtctacaccctgctgcctcatagagagccctgcgcctcgccccccagcgcc
aggtttctctctcagaagctggatctctgtcagctgatccgagatgttctgaatgtgaat
gagatgaacctgtggacctctgtgccgtcctcactggggaagcaccgcgctctgaggtgc
agcatcgaggccgtcgcgcctgacagctcagagttccaggacgtctcccgccggctgcac
ggcagcccggtgcagatccagaagattatgcgtgtcagcaggggggtggagcttcagact
tttaaaagtgatcttgggaacattaagccgctcctccactcgtcttcctccaaaaacttt
gtaggaatcttgtctcgcggcctgctgcttcctcgtgtgggtgtggagcatcatgggatc
gacagaacggacgtcggtaatctgggcagtggaatctacttcagtgacgccatgagcacc
agtctgaaatactccaaacccggagggacagacggctctcggctgctgctcgtgtgtgac
gttgcactgggaaagtgcagggatctctataggagagacctgacgctgacccgggcccca
gagggccatcacagtgtgcatggggtccgccgcacccacaacaccccgtctgactttgag
gatgatgagtacgtggtctacagtcccgatcaggtcaagctcaagtatgtggtccagttc
aacgtagagggggatgagctgaaggacttcagtcctgcagtcaacacatcagctccaccg
ggtcggtcctgcccagaccaagatgtcagcatggacgatgatggcgttgaggtcgttgga
aaccctctggatgatgtgacggctggactgctggacagctctggacagaagctccccctg
caggccgtccacgtgaagtgcaaactgatggatctgctctctcaggtcgtcattttccag
aagtacaccaatcagagctctgtgcccatcgaggccaagtacgtcttccctctggatgat
tctgcagctgtgtgtggatttgaagctttcatcaatgggaagcacgtggtcgggaaggtg
aaggagaaagagaaggctcgtaaggagtacaaacaggctatcgagcgaggtcacggcgcg
tacctcatggaccaggacgcccccgatgtgttcagcatcagcgtgggaaacctgccgccc
ggagcctccgtcctcatcaaggtgacttatgtgagcgagctggtagtcagagatgggagc
attctgttctctttgcccgggagcgtggcaccgtggcaggagagcgcagcgctcaaccag
accacgcaggtgactgtggaaaaggtgtgcgtgactgatgaggcgacaagttcgaaagag
ttcacactggacgtgtcggttgagatgccccacgagatctccggtctgcgctgcatcact
cacaaagtcaagatgaagaagactgagtgtaaggcagtggtcagcgtgctcccggatcag
gtcctgggtccagacggtttccagctgtccatcagcctgtctgaggtccaccttcccagg
atgtgggtggagaaacaccccgacaaggacagtcaggcctgcatgctggttttctaccca
gacttcgaaatgggctccggttcagcagccgaggaagtcatcttgttgctggacacgtcc
gagtccatgagaggggggtcgctccagcacgcccgcagaatcgccctgcaggttctcagg
aatctcggcggcaactgcagactcaacgtggttttgtttggcacagatcacacagacgcg
ttcctgacagcacggccgctcgttgaggttcggcaggctgccgaagacttcatcaagcgt
tcccctccagcagggggcagcacggagctgtggcggcccctgcgagctctcagtctgctg
ccgccgtcccgcggcgtcaggaacctgctgctgctgtcggacggccacatccagaacgca
gccttcaccctgcagctgctcagggacggctctcggcacagccggctcttcacctgcggc
ctcagctcgacggccaatcgccacatgctgagagccctcgcgcaggccggaggcggagct
tatgaattcttcgacacaaaaactaaacacaactgggcagagaaggtggtgtgtcaggtg
aagcgcatgtcgtctcctgggtgcagctcggtgtcggtgaagtggcagcagttcaaccca
acagctcctcctcccgttcaggccccaaggcagctgcacgccctcttcaacgactgtcat
gcgctggtctacggatttgtgccgcactgcactcaggcgactcttcttggaaacctgagc
gggcaggagctgaagaccgtggtgtcgacgagtgagctgcagaagaccagtggcaccttt
gttcacaagctcacggcgagagctctcatccgggattacgaggacggaaacctggacact
ggtgaagctgaccacgagggtaagaaagcagagctgaagtccttcatcactgagctgagc
aaagagttctccatcctgtctcagttcaccagctttgtggccgtcgaggagagggacttg
gagcagccggaggacggagtcacagacatccctgagctggtcctagaggaggatgtggat
ttcttaccgtacatcagctggacctcttctcaggatgctgaaatgacatcggaagatgaa
tcttcggatgatgacatggactttgacctttttactcccccagatgctgaaaagtcaatt
ttggcccagctggattgtgttgcacttgctgcacgtgaagaagatgaatcttcggatgat
gacatgggctttggcctttttactcccccagaagataagataagatcttttgatgacgac
atggactttgagccagacatttgcagtcgaatggacttcacccttaatacagatggaatc
ccaacattggaaggcacactcagcatgcccaattattgccccacaattcgtagcaaatgt
gctataatggaacaaagcagcgaactagatgagagggaatttgacccctttgaaagcgga
gattctgattctgaagaagactacgctgttgtcacgacaagggccactgaaggtcccccg
atgtccaaccttgacatattctttcagtcagagtcttcagccatgaaagtgcctcttcct
cctccagcttctaaagttcagtcctcttctatcccctgcctgtctcttcgtcctcctcta
cctcttcgtgttattggatcacttcctcctcgtcctccgtcttttatgcagtcctcttct
atccccggcctgtctcttcttcctcctctaccttctaaaattcagtcctcttctatccgc
tgccggtctcatcctcttcctcttcctgttgttggatcacttcctaaaaaaatgtcttac
aatcgtatcctcagcccgtctcctcctcctcctcctcctccgtcttttatgcagtcctct
tctatctgtgggcctcctcctcctgtacaacagtggttaaagcccttacaactcagctct
aatggaagcaaaatactttcagtagaaaagaagttgatgttccaaggcatcagtcctctt
ataaggatcgcatcctctgcagatagtggatacgttcctgcctgcctatctacagtatct
aaagatgacgttcttgaggatgttaacgagattgtgactgactcctccccagcggtgaag
ctgtttggcagcgtatctttacaggacatagttgagggaacgaaagcagatgctcaagct
ctgggagtaggctgcacttttggcgcacactcacatcctctccagtccccttcaagtcca
gctttaccaccaaaagatcgatacagaagggaaagcgaaatgaccctgaagaaacgttta
cctcacactctgaagtcctcgttcttaccaagagcagcttgtctatcctctgagagaaag
gctgcagaactggggctcaaatggacaaagatcttccagctacagaaaccggaaggatac
tgggagttaaccgcagaactgggcgaattgattaatctcaatgtggacatctttgtcaac
gtgcacctgaagaacaaaggcatccattctctgggcgtgcaggcccacacgcacatcctg
aggatggtggctactcttctggttctgcagctgatgcgtctggagaacatggaggaagga
aaactgctgcgcactctgttttgtctggaagaggccactcggctcaggcctaagcactgg
caggaggtgaaggaggcggtgaactgggtgcgctgggccgaccaccagtatccctgcatc
tgcagccggctggaattcggactgagctgggactcgtccacccggcagctgctgggctac
gaaggcctcccgcccttctcctccctcaggggtctggagctgcagaagaccggcatcctg
ctgcgggtccactga

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