Cololabis saira (Pacific saury): 133446194
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Entry
133446194 CDS
T09849
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133446194 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133446194 (pou2f1b)
03021 Transcription machinery [BR:
csai03021
]
133446194 (pou2f1b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133446194 (pou2f1b)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
133446194 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
133446194
NCBI-ProteinID:
XP_061580102
LinkDB
All DBs
Position
6:40633073..40665668
Genome browser
AA seq
684 aa
AA seq
DB search
MDSGDGNTGIQTNGLDFQRQMVPTTIANAHTQALLQQSKLEDSGALPTSVQQSVQPQTQL
MLAGGQIAGLALTPAQQQLLIQQAQAQLLAAAVQHSANQQNGTTGASISASAATPITQLP
LSQPIHISPQNLGLPQFVLVQPGHQIATSLQPAQFIISQTSPAQQGILQAQSLLTQLPQS
QANLLPTQPSITLATQPATPTRTTTATPIQSLPQSQTPPKRLDTPTLEEPSDLEELEQFA
KTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLND
AENLTSDQALSSPSALGSAGMGIEGINRRRKKRTSIETSIRVALEKSFLEQNQKPTSEEI
TMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGNSIGGNTPIKTIFTPSSPLVASTASL
VNSPTINTSTTLTVNPVMPLSTSVSGLTFTGTTVGATNTASVISTTPIFTTSVSSPSLSP
ATPTALQASSTDSKAGLQAQTIVTQAPTSIATTLGGGQVMVTASGLSAALQGAQLPTSAS
FAAMAAAAGLNPGLMSTQFTPGGTLLSLTPGGLGSALSPALMSSSTLATLQAALASSGTI
PITSLEGGNLLFANTSGTTPNLVTTPLFLNPQNLQNLSLLTSNPVSLVSAGAGGLQLSAD
PHHQASAAAVPVQASTITTASKAQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggtgacggaaacaccggaatccagaccaatggattggactttcagaggcag
atggtgccaaccacaatcgctaatgcacacacacaagccctcctccaacagtctaagttg
gaagactcgggcgctctcccgacctccgtccagcagagcgtccagcctcaaacccagcta
atgttggccgggggacagattgctggattggccctgactccagcacagcagcagctgttg
atccagcaggctcaagctcagctcctggctgcagctgtgcagcactcagccaaccagcag
aacggcaccaccggggccagcatctcggcctccgcagccacacccatcacccagctgccg
ctgtcgcagcccatccatatctcccctcagaatctaggcctgcctcagtttgtcttggtt
cagcccggccaccagattgccacgtcactgcagcctgcccagttcatcatctcgcagacg
tcaccggcccagcagggcatcttgcaagcccagagtcttctaactcaactacctcaaagc
caagctaacctcctgccgactcaaccaagcatcacccttgcaactcagcctgcaactcca
acacggacaaccaccgccacacctatccagtccttgccccagagtcagaccccacccaag
cggttggacaccccgactctggaggagcctagtgatctcgaggagctggaacagtttgca
aaaactttcaaacagagacgaatcaaactgggctttacgcagggggacgtcggcctggcc
atggggaagctgtatggaaacgacttcagtcaaaccaccatctctcgctttgaggccttg
aatctgagctttaaaaacatgtgcaaactcaagcctttactggagaagtggctcaacgat
gcagagaacctgacatctgaccaggccttgtccagtcccagcgccctgggctccgcgggc
atgggcatcgaggggatcaatcgtagacggaagaagaggaccagtatcgagaccagcatt
cgagtggccttagaaaaaagctttctggagcagaaccaaaaacctacctctgaagagatt
accatgatcgctgaccagctcaacatggagaaggaagtaattcgggtctggttctgcaac
cgccgccagaaagagaagaggatcaacccccccagcagtggcaacagtatcggaggaaac
acccccatcaaaaccatcttcacgcccagtagccctttggtggccagcacagcaagcctt
gttaacagtccaactattaacacatccaccactctgactgtaaacccagtgatgcctctc
agcaccagcgtctccggtctgactttcacaggcacgacagttggagccacgaacacggca
tcggtcatctccaccacgcccatcttcaccacgtcggtcagctctccgtctctcagcccg
gcgactcccacggctctccaagcctcgtccacggacagcaaagccggccttcaggcccag
accatcgtcacgcaggcgccgacgtccatagccacgactctcggagggggtcaggtgatg
gtgacggcgtcggggctgtcggccgcgctgcagggcgcccagcttcccaccagtgccagc
ttcgcggcgatggcggctgctgcggggctcaacccgggactgatgtccacccagttcaca
ccagggggcaccctcctcagtctgactccgggggggctcggcagcgcgctaagtcctgct
ctcatgagtagcagcaccctggctacacttcaagcggccctggcgtcgagcggcacgatc
cccatcacctccctggaaggcgggaacctgctgttcgccaacacctccggcaccacgccc
aacctggtgaccacgccgctcttcctgaacccccagaacctgcagaacctgtcgctgctg
accagcaacccggtcagcctggtgtcggccggggcgggcgggctgcagctctccgccgac
ccccaccaccaagcctccgcggccgccgtgcctgtgcaagcctccaccatcaccactgcc
tccaaggcccagtga
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integrated database retrieval system
