Cololabis saira (Pacific saury): 133446197
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Entry
133446197 CDS
T09849
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a isoform X1
KO
K04683
transcription factor Dp-1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03083
Polycomb repressive complex
csai04110
Cell cycle
csai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133446197 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133446197 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133446197 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133446197 (tfdp1a)
03036 Chromosome and associated proteins [BR:
csai03036
]
133446197 (tfdp1a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
133446197 (tfdp1a)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
133446197 (tfdp1a)
BRITE hierarchy
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
Motif
Other DBs
NCBI-GeneID:
133446197
NCBI-ProteinID:
XP_061580113
LinkDB
All DBs
Position
6:40787925..40808838
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AA seq
410 aa
AA seq
DB search
MAKDGGLIETNGELKVFIDQNMSPSKGVLSLVTVQPTAGTVAKQLLPKTLGPSNVNVATH
MQHVVIGTPQRATVSNTILVNSPHTPSSQFLTQSQAPDASPWSSGKRGKKGEKNGKGLRH
FSMKVCEKVQKKGVTTYNEVADELVAEFSSADNHMSPNDSHVYDQKNIRRRVYDALNVLM
AMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLV
QRNRQTEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIHDDI
EVLKRMGMACGLEIGKCSPEDLKVARSLVPKALEPYVIEMAKGPISNVYITGGTAANGTR
YNASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDEDEYDENDDED
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatggtggtctgattgaaacgaatggagagctgaaggttttcatcgatcag
aatatgagtccaagtaaaggtgtcctgtccttggttacggtccagcctaccgctggcacg
gtggccaaacagcttctacccaaaacacttgggccgtcgaatgtgaacgtggccactcat
atgcaacacgtggtgattgggacgccccaaagggcgacggtatcaaatacaattctggta
aacagtccgcacacgcccagctcccagttcctcacccagagtcaggcgcccgatgcctcc
ccttggtcctcaggaaaacgtggcaagaaaggggagaagaatggaaaaggcttgaggcat
ttctccatgaaagtgtgtgaaaaggtgcagaagaaaggagtgaccacgtataacgaggtg
gccgacgagctggtggccgaattcagctccgcagacaaccacatgtcaccgaatgactcg
catgtctatgaccagaagaacattcgacggcgtgtttatgatgctcttaatgtcctcatg
gccatgaacatcatctcaaaagagaaaaaagagatcaagtggattggcttgccgaccaac
tcggcgcaggagtgccaaaacctcgaggttgagagacaacggcggttggagaggattaag
cagaaacagtcgcagcttcaggagctcatattgcagcaaatagcttttaagaacctcgtt
cagaggaacagacagacggagcagcaggcgaacagacctccgccccccaactccatcatc
caccttcccttcatcatcgtcaacaccagcaagaagacagtcatcgactgcagcatctcc
aacgacaagtttgaatatttgttcaacttcgacagcatgtttgaaatccacgatgacatc
gaggtgctgaagcgcatgggcatggcctgtggcctggagatcgggaagtgttctccggag
gacctgaaggtcgcgcgtagtctggtgcctaaggccctggagccatatgttatagaaatg
gcaaaaggcccgatcagtaacgtgtacatcactggaggaaccgctgccaacgggacccgc
tacaacgccagcagtgacggctgcaccgacggcaccatggcgtccagttcgaacgactct
cactacagcggctcccgcgtggagacgcccgtgtcgtacatgggggacgacgacgacgag
gacgagtacgacgagaacgacgacgaggactaa
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